RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 COL4A3BPQ9Y5P4 624 aa8.79□□□□□ -1
CCDC40-215ENST00000576033 FNDC1Q4ZHG4 1894 aaPredicted RBP8.79□□□□□ -1
CCDC40-215ENST00000576033 XIRP2A4UGR9 3374 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 COL6A3P12111 3177 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 MAGEB2O15479 319 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 HIP1RO75146 1068 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 YEATS4O95619 227 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 EYA4O95677 639 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 FGBP02675 491 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 PLA2G4BP0C869 781 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 DEKP35659 375 aaKnown RBP8.78□□□□□ -1
CCDC40-215ENST00000576033 ARL2P36404 184 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 RFC5P40937 340 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 UBA7P41226 1012 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 NFX1Q12986 1120 aaKnown RBP8.78□□□□□ -1
CCDC40-215ENST00000576033 PAK2Q13177 524 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 HABP4Q5JVS0 413 aaKnown RBP8.78□□□□□ -1
CCDC40-215ENST00000576033 RINT1Q6NUQ1 792 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 Q7L0L9 218 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 OTUD6AQ7L8S5 288 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 RSPH3Q86UC2 560 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 RNF149Q8NC42 400 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 RASSF8Q8NHQ8 419 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 SLC7A3Q8WY07 619 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 HERVK_113Q902F9 699 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 RAD54LQ92698 747 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 CPB2Q96IY4 423 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 NACC1Q96RE7 527 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 MAP7D2Q96T17 732 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 RAB34Q9BZG1 259 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 ST3GAL5Q9UNP4 418 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 KDM3AQ9Y4C1 1321 aa8.78□□□□□ -1
CCDC40-215ENST00000576033 A0A1B0GVL5 298 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 MYMKA6NI61 221 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 MEIS3P2A8K0S8 358 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 M0QZ92 97 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 DKC1O60832 514 aaKnown RBP eCLIP8.77□□□□□ -1.01
CCDC40-215ENST00000576033 CAND2O75155 1236 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 PPP6R2O75170 966 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 RPS6KA5O75582 802 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 DGAT1O75907 488 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 UPP2O95045 317 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 BMP15O95972 392 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 DARSP14868 501 aaKnown RBP8.77□□□□□ -1.01
CCDC40-215ENST00000576033 LIG1P18858 919 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 CYP11B2P19099 503 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 RFC2P35250 354 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 ME1P48163 572 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 FXR1P51114 621 aaKnown RBP eCLIP8.77□□□□□ -1.01
CCDC40-215ENST00000576033 CRYBB1P53674 252 aaPredicted RBP8.77□□□□□ -1.01
CCDC40-215ENST00000576033 ZNF445P59923 1031 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 UBE2HP62256 183 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 MBTD1Q05BQ5 628 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 E2F4Q16254 413 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 AMHR2Q16671 573 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 IER5Q5VY09 327 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 RESP18Q5W5W9 173 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 ATL3Q6DD88 541 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 C1orf186Q6ZWK4 172 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 GPBP1Q86WP2 473 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 MYOCDQ8IZQ8 938 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 PSPC1Q8WXF1 523 aaKnown RBP8.77□□□□□ -1.01
CCDC40-215ENST00000576033 HPS3Q969F9 1004 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 DHX58Q96C10 678 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 CDK5RAP3Q96JB5 506 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 SPATA32Q96LK8 384 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 AK8Q96MA6 479 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 FAM161BQ96MY7 647 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 REEP2Q9BRK0 252 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 FGFBP2Q9BYJ0 223 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 RNF19AQ9NV58 838 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 RCOR1Q9UKL0 485 aa8.77□□□□□ -1.01
CCDC40-215ENST00000576033 LRRIQ4A6NIV6 560 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 CUTAO60888 179 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 GADD45BO75293 160 aaPredicted RBP8.76□□□□□ -1.01
CCDC40-215ENST00000576033 PRR29P0C7W0 189 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 FGFR1P11362 822 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 PFKFB1P16118 471 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 ATP2A2P16615 1042 aaKnown RBP8.76□□□□□ -1.01
CCDC40-215ENST00000576033 TMOD1P28289 359 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 KRT85P78386 507 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 DSC3Q14574 896 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 CSPP1Q1MSJ5 1256 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 DYMQ7RTS9 669 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 TAS1R3Q7RTX0 852 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 TMEM130Q8N3G9 435 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 SYT2Q8N9I0 419 aaPredicted RBP8.76□□□□□ -1.01
CCDC40-215ENST00000576033 GLIS3Q8NEA6 775 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 KCNG4Q8TDN1 519 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 SEPT8Q92599 483 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 LARP4BQ92615 738 aaKnown RBP8.76□□□□□ -1.01
CCDC40-215ENST00000576033 LPPQ93052 612 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 CALML4Q96GE6 196 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 PBX4Q9BYU1 374 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 CCSER1Q9C0I3 900 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 NKX2-4Q9H2Z4 354 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 CERS4Q9HA82 394 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 TMEM63CQ9P1W3 806 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 DNM3Q9UQ16 869 aa8.76□□□□□ -1.01
CCDC40-215ENST00000576033 PIN4Q9Y237 131 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms