RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	CATSPER3	Q86XQ3	398 aa		15.83	■□□□□ 0.12
EDC4-210	ENST00000575507	NOSTRIN	Q8IVI9	506 aa		15.83	■□□□□ 0.12
EDC4-210	ENST00000575507	FAM184A	Q8NB25	1140 aa		15.83	■□□□□ 0.12
EDC4-210	ENST00000575507	SLC7A3	Q8WY07	619 aa		15.83	■□□□□ 0.12
EDC4-210	ENST00000575507	P2RX5	Q93086	422 aa		15.83	■□□□□ 0.12
EDC4-210	ENST00000575507	PLVAP	Q9BX97	442 aa		15.83	■□□□□ 0.12
EDC4-210	ENST00000575507	RWDD3	Q9Y3V2	267 aa		15.83	■□□□□ 0.12
EDC4-210	ENST00000575507	COL4A3BP	Q9Y5P4	624 aa		15.83	■□□□□ 0.12
EDC4-210	ENST00000575507	MYO9B	Q13459	2157 aa		15.83	■□□□□ 0.12
EDC4-210	ENST00000575507	MEIS3P2	A8K0S8	358 aa		15.82	■□□□□ 0.12
EDC4-210	ENST00000575507	MED24	O75448	989 aa		15.82	■□□□□ 0.12
EDC4-210	ENST00000575507	SRGAP2C	P0DJJ0	459 aa		15.82	■□□□□ 0.12
EDC4-210	ENST00000575507	RFC5	P40937	340 aa		15.82	■□□□□ 0.12
EDC4-210	ENST00000575507	CDC42EP1	Q00587	391 aa		15.82	■□□□□ 0.12
EDC4-210	ENST00000575507	LAMTOR4	Q0VGL1	99 aa		15.82	■□□□□ 0.12
EDC4-210	ENST00000575507	EMC2	Q15006	297 aa		15.82	■□□□□ 0.12
EDC4-210	ENST00000575507	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	15.82	■□□□□ 0.12
EDC4-210	ENST00000575507	UBE2Z	Q9H832	354 aa	Predicted RBP	15.82	■□□□□ 0.12
EDC4-210	ENST00000575507	PCDHGC5	Q9Y5F6	944 aa		15.82	■□□□□ 0.12
EDC4-210	ENST00000575507	ST18	O60284	1047 aa		15.81	■□□□□ 0.12
EDC4-210	ENST00000575507	HOXA11	P31270	313 aa	Predicted RBP	15.81	■□□□□ 0.12
EDC4-210	ENST00000575507	RARRES1	P49788	294 aa		15.81	■□□□□ 0.12
EDC4-210	ENST00000575507	HYAL1	Q12794	435 aa		15.81	■□□□□ 0.12
EDC4-210	ENST00000575507	COL19A1	Q14993	1142 aa		15.81	■□□□□ 0.12
EDC4-210	ENST00000575507	ECM1	Q16610	540 aa		15.81	■□□□□ 0.12
EDC4-210	ENST00000575507	LONRF3	Q496Y0	759 aa		15.81	■□□□□ 0.12
EDC4-210	ENST00000575507	TTC38	Q5R3I4	469 aa		15.81	■□□□□ 0.12
EDC4-210	ENST00000575507	ADGRD2	Q7Z7M1	963 aa		15.81	■□□□□ 0.12
EDC4-210	ENST00000575507	FERMT3	Q86UX7	667 aa		15.81	■□□□□ 0.12
EDC4-210	ENST00000575507	RNF169	Q8NCN4	708 aa		15.81	■□□□□ 0.12
EDC4-210	ENST00000575507	POF1B	Q8WVV4	589 aa		15.81	■□□□□ 0.12
EDC4-210	ENST00000575507	JPH2	Q9BR39	696 aa	Predicted RBP	15.81	■□□□□ 0.12
EDC4-210	ENST00000575507	TMEM117	Q9H0C3	514 aa		15.81	■□□□□ 0.12
EDC4-210	ENST00000575507	LMAN2L	Q9H0V9	348 aa		15.81	■□□□□ 0.12
EDC4-210	ENST00000575507	NSUN3	Q9H649	340 aa	Known RBP	15.81	■□□□□ 0.12
EDC4-210	ENST00000575507	CHST12	Q9NRB3	414 aa		15.81	■□□□□ 0.12
EDC4-210	ENST00000575507	ANKEF1	Q9NU02	776 aa		15.81	■□□□□ 0.12
EDC4-210	ENST00000575507	PPME1	Q9Y570	386 aa		15.81	■□□□□ 0.12
EDC4-210	ENST00000575507	PCDHB6	Q9Y5E3	794 aa		15.81	■□□□□ 0.12
EDC4-210	ENST00000575507	OR52Z1	P0C646	297 aa		15.8	■□□□□ 0.12
EDC4-210	ENST00000575507	KCNA5	P22460	613 aa		15.8	■□□□□ 0.12
EDC4-210	ENST00000575507	LTBR	P36941	435 aa		15.8	■□□□□ 0.12
EDC4-210	ENST00000575507	PBX3	P40426	434 aa		15.8	■□□□□ 0.12
EDC4-210	ENST00000575507	PHKA2	P46019	1235 aa		15.8	■□□□□ 0.12
EDC4-210	ENST00000575507	IL17A	Q16552	155 aa		15.8	■□□□□ 0.12
EDC4-210	ENST00000575507	TIGD5	Q53EQ6	642 aa		15.8	■□□□□ 0.12
EDC4-210	ENST00000575507	NAALADL2	Q58DX5	795 aa		15.8	■□□□□ 0.12
EDC4-210	ENST00000575507	COLGALT1	Q8NBJ5	622 aa		15.8	■□□□□ 0.12
EDC4-210	ENST00000575507	RNF149	Q8NC42	400 aa		15.8	■□□□□ 0.12
EDC4-210	ENST00000575507	ASAP3	Q8TDY4	903 aa		15.8	■□□□□ 0.12
EDC4-210	ENST00000575507	PSPC1	Q8WXF1	523 aa	Known RBP	15.8	■□□□□ 0.12
EDC4-210	ENST00000575507	LPP	Q93052	612 aa		15.8	■□□□□ 0.12
EDC4-210	ENST00000575507	TRAIP	Q9BWF2	469 aa		15.8	■□□□□ 0.12
EDC4-210	ENST00000575507	INO80B	Q9C086	356 aa	Predicted RBP	15.8	■□□□□ 0.12
EDC4-210	ENST00000575507	PIN4	Q9Y237	131 aa	Known RBP	15.8	■□□□□ 0.12
EDC4-210	ENST00000575507		H3BQ06	376 aa	Predicted RBP	15.79	■□□□□ 0.12
EDC4-210	ENST00000575507	LINC01565	O15544	149 aa		15.79	■□□□□ 0.12
EDC4-210	ENST00000575507	EOMES	O95936	686 aa		15.79	■□□□□ 0.12
EDC4-210	ENST00000575507	SFPQ	P23246	707 aa	Known RBP eCLIP	15.79	■□□□□ 0.12
EDC4-210	ENST00000575507	ARL2	P36404	184 aa		15.79	■□□□□ 0.12
EDC4-210	ENST00000575507	DLX2	Q07687	328 aa	Predicted RBP	15.79	■□□□□ 0.12
EDC4-210	ENST00000575507	AAK1	Q2M2I8	961 aa		15.79	■□□□□ 0.12
EDC4-210	ENST00000575507	CTC1	Q2NKJ3	1217 aa		15.79	■□□□□ 0.12
EDC4-210	ENST00000575507	UBXN11	Q5T124	520 aa		15.79	■□□□□ 0.12
EDC4-210	ENST00000575507	SPOUT1	Q5T280	376 aa	Known RBP	15.79	■□□□□ 0.12
EDC4-210	ENST00000575507	CATSPER4	Q7RTX7	472 aa		15.79	■□□□□ 0.12
EDC4-210	ENST00000575507	NEK9	Q8TD19	979 aa		15.79	■□□□□ 0.12
EDC4-210	ENST00000575507	HELQ	Q8TDG4	1101 aa		15.79	■□□□□ 0.12
EDC4-210	ENST00000575507	UHRF1	Q96T88	793 aa	Predicted RBP	15.79	■□□□□ 0.12
EDC4-210	ENST00000575507	MTR	Q99707	1265 aa		15.79	■□□□□ 0.12
EDC4-210	ENST00000575507	GPRC5C	Q9NQ84	441 aa		15.79	■□□□□ 0.12
EDC4-210	ENST00000575507	ASAP2	O43150	1006 aa		15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	FGF18	O76093	207 aa		15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	XRCC6	P12956	609 aa	Known RBP eCLIP	15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	GLRA2	P23416	452 aa		15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	GJB2	P29033	226 aa		15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	TRAPPC10	P48553	1259 aa		15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	MCM2	P49736	904 aa		15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	AFF1	P51825	1210 aa	Known RBP	15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	ERVFC1	P60507	584 aa		15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	GNL2	Q13823	731 aa	Known RBP	15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	CAPS	Q13938	189 aa		15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	LEXM	Q3ZCV2	418 aa		15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	TWF2	Q6IBS0	349 aa	Known RBP	15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	POTEG	Q6S5H5	508 aa		15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	MAEA	Q7L5Y9	396 aa		15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	SRGAP1	Q7Z6B7	1085 aa		15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	EXOC8	Q8IYI6	725 aa		15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	TCP11	Q8WWU5	503 aa		15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	PABPC5	Q96DU9	382 aa	Known RBP	15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	POLR3C	Q9BUI4	534 aa	Predicted RBP	15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	IGFLR1	Q9H665	355 aa		15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	TUFT1	Q9NNX1	390 aa		15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	CD320	Q9NPF0	282 aa		15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	AGPAT5	Q9NUQ2	364 aa		15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	FAM105A	Q9NUU6	356 aa		15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	RNF216	Q9NWF9	866 aa	Predicted RBP	15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	DACT1	Q9NYF0	836 aa		15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	NLRC5	Q86WI3	1866 aa		15.78	■□□□□ 0.12
EDC4-210	ENST00000575507	TNFRSF10A	O00220	468 aa		15.77	■□□□□ 0.12

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms