RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 ACCSQ96QU6 501 aa25.79■■□□□ 1.72
NPLOC4-217ENST00000574897 MOV10L1Q9BXT6 1211 aaKnown RBP25.79■■□□□ 1.72
NPLOC4-217ENST00000574897 INTS2Q9H0H0 1204 aaKnown RBP25.79■■□□□ 1.72
NPLOC4-217ENST00000574897 GOLPH3Q9H4A6 298 aa25.79■■□□□ 1.72
NPLOC4-217ENST00000574897 LUC7LQ9NQ29 371 aaKnown RBP25.79■■□□□ 1.72
NPLOC4-217ENST00000574897 GABBR1Q9UBS5 961 aa25.79■■□□□ 1.72
NPLOC4-217ENST00000574897 AFG3L2Q9Y4W6 797 aa25.79■■□□□ 1.72
NPLOC4-217ENST00000574897 SFNP31947 248 aa25.78■■□□□ 1.72
NPLOC4-217ENST00000574897 TXLNBQ8N3L3 684 aa25.78■■□□□ 1.72
NPLOC4-217ENST00000574897 GPR88Q9GZN0 384 aa25.78■■□□□ 1.72
NPLOC4-217ENST00000574897 PNMA2Q9UL42 364 aa25.78■■□□□ 1.72
NPLOC4-217ENST00000574897 TULP1O00294 542 aaPredicted RBP25.78■■□□□ 1.72
NPLOC4-217ENST00000574897 EVI5O60447 810 aa25.78■■□□□ 1.72
NPLOC4-217ENST00000574897 MATR3P43243 847 aaKnown RBP eCLIP25.78■■□□□ 1.722e-8■■■■■ 31.3
NPLOC4-217ENST00000574897 DRAP1Q14919 205 aaPredicted RBP25.78■■□□□ 1.72
NPLOC4-217ENST00000574897 PPP2R5AQ15172 486 aa25.78■■□□□ 1.72
NPLOC4-217ENST00000574897 ALKBH5Q6P6C2 394 aaKnown RBP25.78■■□□□ 1.72
NPLOC4-217ENST00000574897 OLIG1Q8TAK6 271 aa25.78■■□□□ 1.72
NPLOC4-217ENST00000574897 PLEKHO2Q8TD55 490 aa25.78■■□□□ 1.72
NPLOC4-217ENST00000574897 NSUN6Q8TEA1 469 aaKnown RBP25.78■■□□□ 1.72
NPLOC4-217ENST00000574897 TEX13BQ9BXU2 312 aa25.78■■□□□ 1.72
NPLOC4-217ENST00000574897 TMOD4Q9NZQ9 345 aa25.78■■□□□ 1.72
NPLOC4-217ENST00000574897 L1RE1Q9UN81 338 aa25.78■■□□□ 1.72
NPLOC4-217ENST00000574897 F8VZ95 297 aa25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 PRLRP16471 622 aa25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 FBXO41Q8TF61 875 aa25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 GPRASP2Q96D09 838 aa25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 TMEM206Q9H813 350 aa25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 PCDHA10Q9Y5I2 948 aa25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 BZW2Q9Y6E2 419 aaKnown RBP25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 GRID2IPA4D2P6 1211 aa25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 GOLGA8IPA6NC78 632 aa25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 GOLGA8JA6NMD2 632 aa25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 DDX3XO00571 662 aaKnown RBP eCLIP25.77■■□□□ 1.724e-9■■■□□ 15.9
NPLOC4-217ENST00000574897 MAP2K7O14733 419 aa25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 MAPTP10636 758 aaKnown RBP25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 TCP1P17987 556 aaKnown RBP25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 OAZ1P54368 228 aa25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 GTF2BQ00403 316 aa25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 PPP3CAQ08209 521 aa25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 FSTL1Q12841 308 aa25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 PTPROQ16827 1216 aa25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 WDR93Q6P2C0 686 aa25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.77■■□□□ 1.721e-6■■■■■ 29.6
NPLOC4-217ENST00000574897 BSNDQ8WZ55 320 aa25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 RPGRIP1Q96KN7 1286 aa25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 HSPBP1Q9NZL4 362 aa25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 OTOFQ9HC10 1997 aa25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 EMSYQ7Z589 1322 aa25.77■■□□□ 1.72
NPLOC4-217ENST00000574897 CCDC169A6NNP5 214 aa25.76■■□□□ 1.71
NPLOC4-217ENST00000574897 USP2O75604 605 aaPredicted RBP25.76■■□□□ 1.71
NPLOC4-217ENST00000574897 ARHGAP44Q17R89 818 aa25.76■■□□□ 1.71
NPLOC4-217ENST00000574897 PHLDB3Q6NSJ2 640 aa25.76■■□□□ 1.71
NPLOC4-217ENST00000574897 GSPT2Q8IYD1 628 aaKnown RBP25.76■■□□□ 1.71
NPLOC4-217ENST00000574897 ACAD9Q9H845 621 aa25.76■■□□□ 1.71
NPLOC4-217ENST00000574897 NENFQ9UMX5 172 aa25.76■■□□□ 1.71
NPLOC4-217ENST00000574897 PCDHGC5Q9Y5F6 944 aa25.76■■□□□ 1.71
NPLOC4-217ENST00000574897 ERLIN1O75477 346 aa25.76■■□□□ 1.71
NPLOC4-217ENST00000574897 STAT1P42224 750 aa25.76■■□□□ 1.71
NPLOC4-217ENST00000574897 NCKAP1LP55160 1127 aa25.76■■□□□ 1.71
NPLOC4-217ENST00000574897 C1orf220Q5T0J3 134 aa25.76■■□□□ 1.71
NPLOC4-217ENST00000574897 ZNF746Q6NUN9 644 aaPredicted RBP25.76■■□□□ 1.71
NPLOC4-217ENST00000574897 GPC2Q8N158 579 aa25.76■■□□□ 1.71
NPLOC4-217ENST00000574897 SPATA4Q8NEY3 305 aa25.76■■□□□ 1.71
NPLOC4-217ENST00000574897 LNX1Q8TBB1 728 aaPredicted RBP25.76■■□□□ 1.71
NPLOC4-217ENST00000574897 UBXN6Q9BZV1 441 aa25.76■■□□□ 1.71
NPLOC4-217ENST00000574897 ZCCHC17Q9NP64 241 aaKnown RBP25.76■■□□□ 1.71
NPLOC4-217ENST00000574897 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.76■■□□□ 1.719e-7■■■■■ 77.3
NPLOC4-217ENST00000574897 ANKEF1Q9NU02 776 aa25.76■■□□□ 1.71
NPLOC4-217ENST00000574897 LOC285556D6RIA3 1793 aa25.76■■□□□ 1.71
NPLOC4-217ENST00000574897 ANKRD63C9JTQ0 380 aa25.75■■□□□ 1.71
NPLOC4-217ENST00000574897 SOX5P35711 763 aa25.75■■□□□ 1.71
NPLOC4-217ENST00000574897 GCLMP48507 274 aa25.75■■□□□ 1.71
NPLOC4-217ENST00000574897 TREML2Q5T2D2 321 aa25.75■■□□□ 1.71
NPLOC4-217ENST00000574897 SWSAP1Q6NVH7 229 aa25.75■■□□□ 1.71
NPLOC4-217ENST00000574897 LMO3Q8TAP4 145 aa25.75■■□□□ 1.71
NPLOC4-217ENST00000574897 HDAC7Q8WUI4 952 aa25.75■■□□□ 1.71
NPLOC4-217ENST00000574897 STBD1O95210 358 aa25.75■■□□□ 1.71
NPLOC4-217ENST00000574897 SMC1AQ14683 1233 aaKnown RBP25.75■■□□□ 1.71
NPLOC4-217ENST00000574897 XRRA1Q6P2D8 792 aa25.75■■□□□ 1.71
NPLOC4-217ENST00000574897 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.75■■□□□ 1.71
NPLOC4-217ENST00000574897 CCDC60Q8IWA6 550 aaPredicted RBP25.75■■□□□ 1.71
NPLOC4-217ENST00000574897 U2AF1L4Q8WU68 220 aaKnown RBP25.75■■□□□ 1.71
NPLOC4-217ENST00000574897 STK33Q9BYT3 514 aa25.75■■□□□ 1.71
NPLOC4-217ENST00000574897 APEX2Q9UBZ4 518 aa25.75■■□□□ 1.71
NPLOC4-217ENST00000574897 SNCAIPQ9Y6H5 919 aa25.75■■□□□ 1.71
NPLOC4-217ENST00000574897 POLR3GO15318 223 aaPredicted RBP25.74■■□□□ 1.71
NPLOC4-217ENST00000574897 DDNO94850 711 aaPredicted RBP25.74■■□□□ 1.71
NPLOC4-217ENST00000574897 ADRB2P07550 413 aa25.74■■□□□ 1.71
NPLOC4-217ENST00000574897 MYBL2P10244 700 aa25.74■■□□□ 1.71
NPLOC4-217ENST00000574897 KRT13P13646 458 aa25.74■■□□□ 1.71
NPLOC4-217ENST00000574897 NPTX2P47972 431 aa25.74■■□□□ 1.71
NPLOC4-217ENST00000574897 VAMP7P51809 220 aa25.74■■□□□ 1.71
NPLOC4-217ENST00000574897 ALCAMQ13740 583 aa25.74■■□□□ 1.71
NPLOC4-217ENST00000574897 VGLL4Q14135 290 aa25.74■■□□□ 1.71
NPLOC4-217ENST00000574897 CEP170P1Q96L14 293 aa25.74■■□□□ 1.71
NPLOC4-217ENST00000574897 FERP16591 822 aa25.74■■□□□ 1.71
NPLOC4-217ENST00000574897 CNTN2Q02246 1040 aa25.74■■□□□ 1.71
NPLOC4-217ENST00000574897 XXYLT1Q8NBI6 393 aa25.74■■□□□ 1.71
NPLOC4-217ENST00000574897 TMEM161BQ8NDZ6 487 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms