RNA–Protein interactions for RNA: ENST00000572723.1

PRPF8-206, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-206ENST00000572723 ERICH6BQ5W0A0 696 aa13.15□□□□□ -0.3
PRPF8-206ENST00000572723 KCNT2Q6UVM3 1135 aa13.15□□□□□ -0.3
PRPF8-206ENST00000572723 ANO5Q75V66 913 aa13.15□□□□□ -0.3
PRPF8-206ENST00000572723 ZNF598Q86UK7 904 aaKnown RBP13.15□□□□□ -0.3
PRPF8-206ENST00000572723 ZNF410Q86VK4 478 aa13.15□□□□□ -0.3
PRPF8-206ENST00000572723 RSPH1Q8WYR4 309 aa13.15□□□□□ -0.3
PRPF8-206ENST00000572723 MRPS27Q92552 414 aaKnown RBP13.15□□□□□ -0.3
PRPF8-206ENST00000572723 FDXACB1Q9BRP7 624 aaPredicted RBP13.15□□□□□ -0.3
PRPF8-206ENST00000572723 NGRNQ9NPE2 291 aaKnown RBP13.15□□□□□ -0.3
PRPF8-206ENST00000572723 SUCLA2Q9P2R7 463 aaPredicted RBP13.15□□□□□ -0.3
PRPF8-206ENST00000572723 ORC3Q9UBD5 711 aaPredicted RBP13.15□□□□□ -0.3
PRPF8-206ENST00000572723 HCN4Q9Y3Q4 1203 aa13.15□□□□□ -0.3
PRPF8-206ENST00000572723 PPME1Q9Y570 386 aa13.15□□□□□ -0.3
PRPF8-206ENST00000572723 MARCH6O60337 910 aa13.14□□□□□ -0.31
PRPF8-206ENST00000572723 CCNT1O60563 726 aaKnown RBP13.14□□□□□ -0.31
PRPF8-206ENST00000572723 EIF5BO60841 1220 aaKnown RBP13.14□□□□□ -0.31
PRPF8-206ENST00000572723 CSDE1O75534 798 aaKnown RBP13.14□□□□□ -0.31
PRPF8-206ENST00000572723 BAG4O95429 457 aaKnown RBP13.14□□□□□ -0.31
PRPF8-206ENST00000572723 SKIP12755 728 aa13.14□□□□□ -0.31
PRPF8-206ENST00000572723 FGFR4P22455 802 aa13.14□□□□□ -0.31
PRPF8-206ENST00000572723 PPM1AP35813 382 aa13.14□□□□□ -0.31
PRPF8-206ENST00000572723 EPHA7Q15375 998 aa13.14□□□□□ -0.31
PRPF8-206ENST00000572723 DUSP6Q16828 381 aa13.14□□□□□ -0.31
PRPF8-206ENST00000572723 TMEM184AQ6ZMB5 413 aa13.14□□□□□ -0.31
PRPF8-206ENST00000572723 LRRC43Q8N309 656 aa13.14□□□□□ -0.31
PRPF8-206ENST00000572723 SMRP1Q8NCR6 262 aa13.14□□□□□ -0.31
PRPF8-206ENST00000572723 HAS1Q92839 578 aa13.14□□□□□ -0.31
PRPF8-206ENST00000572723 FAM122AQ96E09 287 aa13.14□□□□□ -0.31
PRPF8-206ENST00000572723 ZNF558Q96NG5 402 aa13.14□□□□□ -0.31
PRPF8-206ENST00000572723 SH2D3AQ9BRG2 576 aa13.14□□□□□ -0.31
PRPF8-206ENST00000572723 CYP26B1Q9NR63 512 aa13.14□□□□□ -0.31
PRPF8-206ENST00000572723 SPG21Q9NZD8 308 aa13.14□□□□□ -0.31
PRPF8-206ENST00000572723 HCSTQ9UBK5 93 aa13.14□□□□□ -0.31
PRPF8-206ENST00000572723 VAV3Q9UKW4 847 aa13.14□□□□□ -0.31
PRPF8-206ENST00000572723 PCDHGC5Q9Y5F6 944 aa13.14□□□□□ -0.31
PRPF8-206ENST00000572723 CARNS1A5YM72 827 aa13.13□□□□□ -0.31
PRPF8-206ENST00000572723 TMEM150BA6NC51 233 aa13.13□□□□□ -0.31
PRPF8-206ENST00000572723 FAM86C2PA6NEL3 165 aa13.13□□□□□ -0.31
PRPF8-206ENST00000572723 PER2O15055 1255 aa13.13□□□□□ -0.31
PRPF8-206ENST00000572723 CTDNEP1O95476 244 aa13.13□□□□□ -0.31
PRPF8-206ENST00000572723 GLP2RO95838 553 aa13.13□□□□□ -0.31
PRPF8-206ENST00000572723 SFPQP23246 707 aaKnown RBP eCLIP13.13□□□□□ -0.31
PRPF8-206ENST00000572723 PLA2G5P39877 138 aa13.13□□□□□ -0.31
PRPF8-206ENST00000572723 AK2P54819 239 aa13.13□□□□□ -0.31
PRPF8-206ENST00000572723 CLLU1OSQ5K130 101 aa13.13□□□□□ -0.31
PRPF8-206ENST00000572723 PIK3AP1Q6ZUJ8 805 aa13.13□□□□□ -0.31
PRPF8-206ENST00000572723 OTUD6AQ7L8S5 288 aa13.13□□□□□ -0.31
PRPF8-206ENST00000572723 RHPN2Q8IUC4 686 aa13.13□□□□□ -0.31
PRPF8-206ENST00000572723 C4orf19Q8IY42 314 aa13.13□□□□□ -0.31
PRPF8-206ENST00000572723 SLFN12Q8IYM2 578 aa13.13□□□□□ -0.31
PRPF8-206ENST00000572723 RNF169Q8NCN4 708 aa13.13□□□□□ -0.31
PRPF8-206ENST00000572723 OXER1Q8TDS5 423 aa13.13□□□□□ -0.31
PRPF8-206ENST00000572723 MRPL9Q9BYD2 267 aaKnown RBP13.13□□□□□ -0.31
PRPF8-206ENST00000572723 GJB4Q9NTQ9 266 aa13.13□□□□□ -0.31
PRPF8-206ENST00000572723 C5orf42Q9H799 3197 aa13.12□□□□□ -0.31
PRPF8-206ENST00000572723 ASAP2O43150 1006 aa13.12□□□□□ -0.31
PRPF8-206ENST00000572723 ZNF623O75123 536 aa13.12□□□□□ -0.31
PRPF8-206ENST00000572723 FDPSP14324 419 aaKnown RBP13.12□□□□□ -0.31
PRPF8-206ENST00000572723 ATF7P17544 494 aaPredicted RBP13.12□□□□□ -0.31
PRPF8-206ENST00000572723 PHKA2P46019 1235 aa13.12□□□□□ -0.31
PRPF8-206ENST00000572723 ALDH7A1P49419 539 aaKnown RBP13.12□□□□□ -0.31
PRPF8-206ENST00000572723 NPEPPSP55786 919 aa13.12□□□□□ -0.31
PRPF8-206ENST00000572723 TMC7Q7Z402 723 aa13.12□□□□□ -0.31
PRPF8-206ENST00000572723 HELQQ8TDG4 1101 aa13.12□□□□□ -0.31
PRPF8-206ENST00000572723 SLC7A3Q8WY07 619 aa13.12□□□□□ -0.31
PRPF8-206ENST00000572723 CEP170P1Q96L14 293 aa13.12□□□□□ -0.31
PRPF8-206ENST00000572723 TCF25Q9BQ70 676 aa13.12□□□□□ -0.31
PRPF8-206ENST00000572723 DHX33Q9H6R0 707 aaKnown RBP13.12□□□□□ -0.31
PRPF8-206ENST00000572723 BRMS1Q9HCU9 246 aa13.12□□□□□ -0.31
PRPF8-206ENST00000572723 BARX2Q9UMQ3 279 aaPredicted RBP13.12□□□□□ -0.31
PRPF8-206ENST00000572723 MUC6Q6W4X9 2439 aa13.12□□□□□ -0.31
PRPF8-206ENST00000572723 GAS2O43903 313 aaKnown RBP13.11□□□□□ -0.31
PRPF8-206ENST00000572723 SRGAP2BP0DMP2 458 aa13.11□□□□□ -0.31
PRPF8-206ENST00000572723 KRT2P35908 639 aa13.11□□□□□ -0.31
PRPF8-206ENST00000572723 RFC5P40937 340 aa13.11□□□□□ -0.31
PRPF8-206ENST00000572723 KCNC3Q14003 757 aa13.11□□□□□ -0.31
PRPF8-206ENST00000572723 BMS1Q14692 1282 aaKnown RBP13.11□□□□□ -0.31
PRPF8-206ENST00000572723 HERC4Q5GLZ8 1057 aaPredicted RBP13.11□□□□□ -0.31
PRPF8-206ENST00000572723 PLPP4Q5VZY2 271 aa13.11□□□□□ -0.31
PRPF8-206ENST00000572723 PLA2G4FQ68DD2 849 aa13.11□□□□□ -0.31
PRPF8-206ENST00000572723 TWF2Q6IBS0 349 aaKnown RBP13.11□□□□□ -0.31
PRPF8-206ENST00000572723 CATSPER4Q7RTX7 472 aa13.11□□□□□ -0.31
PRPF8-206ENST00000572723 SRGAP1Q7Z6B7 1085 aa13.11□□□□□ -0.31
PRPF8-206ENST00000572723 RNF135Q8IUD6 432 aa13.11□□□□□ -0.31
PRPF8-206ENST00000572723 KSR1Q8IVT5 923 aa13.11□□□□□ -0.31
PRPF8-206ENST00000572723 SLC39A11Q8N1S5 342 aa13.11□□□□□ -0.31
PRPF8-206ENST00000572723 MRPL43Q8N983 215 aaKnown RBP13.11□□□□□ -0.31
PRPF8-206ENST00000572723 ZNF579Q8NAF0 562 aaKnown RBP13.11□□□□□ -0.31
PRPF8-206ENST00000572723 PRPF31Q8WWY3 499 aaKnown RBP13.11□□□□□ -0.31
PRPF8-206ENST00000572723 PSPC1Q8WXF1 523 aaKnown RBP13.11□□□□□ -0.31
PRPF8-206ENST00000572723 NLRP4Q96MN2 994 aa13.11□□□□□ -0.31
PRPF8-206ENST00000572723 PHF7Q9BWX1 381 aaPredicted RBP13.11□□□□□ -0.31
PRPF8-206ENST00000572723 ZSWIM4Q9H7M6 989 aa13.11□□□□□ -0.31
PRPF8-206ENST00000572723 IFT122Q9HBG6 1241 aa13.11□□□□□ -0.31
PRPF8-206ENST00000572723 ENTPD7Q9NQZ7 604 aa13.11□□□□□ -0.31
PRPF8-206ENST00000572723 USP15Q9Y4E8 981 aaPredicted RBP13.11□□□□□ -0.31
PRPF8-206ENST00000572723 COL4A3BPQ9Y5P4 624 aa13.11□□□□□ -0.31
PRPF8-206ENST00000572723 MYO10Q9HD67 2058 aa13.11□□□□□ -0.31
PRPF8-206ENST00000572723 HIDE1A8MVS5 230 aa13.1□□□□□ -0.31
PRPF8-206ENST00000572723 LOC730098B7Z3J9 87 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms