RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 PDCP20941 246 aa16.22■□□□□ 0.19
LITAF-208ENST00000571627 BMPR1AP36894 532 aa16.22■□□□□ 0.19
LITAF-208ENST00000571627 RARRES1P49788 294 aa16.22■□□□□ 0.19
LITAF-208ENST00000571627 CDC42EP1Q00587 391 aa16.22■□□□□ 0.19
LITAF-208ENST00000571627 LAMTOR4Q0VGL1 99 aa16.22■□□□□ 0.19
LITAF-208ENST00000571627 PTGDRQ13258 359 aa16.22■□□□□ 0.19
LITAF-208ENST00000571627 EXOC8Q8IYI6 725 aa16.22■□□□□ 0.19
LITAF-208ENST00000571627 RNF169Q8NCN4 708 aa16.22■□□□□ 0.19
LITAF-208ENST00000571627 IFT122Q9HBG6 1241 aa16.22■□□□□ 0.19
LITAF-208ENST00000571627 TMEM161AQ9NX61 479 aa16.22■□□□□ 0.19
LITAF-208ENST00000571627 USO1O60763 962 aaKnown RBP16.21■□□□□ 0.19
LITAF-208ENST00000571627 SFPQP23246 707 aaKnown RBP eCLIP16.21■□□□□ 0.19
LITAF-208ENST00000571627 FAM189BP81408 668 aa16.21■□□□□ 0.19
LITAF-208ENST00000571627 TFF2Q03403 129 aa16.21■□□□□ 0.19
LITAF-208ENST00000571627 CATSPER4Q7RTX7 472 aa16.21■□□□□ 0.19
LITAF-208ENST00000571627 FERMT3Q86UX7 667 aa16.21■□□□□ 0.19
LITAF-208ENST00000571627 ECHDC2Q86YB7 292 aa16.21■□□□□ 0.19
LITAF-208ENST00000571627 HSCBQ8IWL3 235 aa16.21■□□□□ 0.19
LITAF-208ENST00000571627 POLR3CQ9BUI4 534 aaPredicted RBP16.21■□□□□ 0.19
LITAF-208ENST00000571627 MINDY3Q9H8M7 445 aa16.21■□□□□ 0.19
LITAF-208ENST00000571627 ATP6V0A4Q9HBG4 840 aa16.21■□□□□ 0.19
LITAF-208ENST00000571627 TUFT1Q9NNX1 390 aa16.21■□□□□ 0.19
LITAF-208ENST00000571627 RNF19AQ9NV58 838 aa16.21■□□□□ 0.19
LITAF-208ENST00000571627 LMCD1Q9NZU5 365 aa16.21■□□□□ 0.19
LITAF-208ENST00000571627 PIN4Q9Y237 131 aaKnown RBP16.21■□□□□ 0.19
LITAF-208ENST00000571627 SPTBN5Q9NRC6 3674 aaKnown RBP16.21■□□□□ 0.18
LITAF-208ENST00000571627 C5orf67F2Z3F1 127 aa16.2■□□□□ 0.18
LITAF-208ENST00000571627 GRM6O15303 877 aa16.2■□□□□ 0.18
LITAF-208ENST00000571627 GAS2O43903 313 aaKnown RBP16.2■□□□□ 0.18
LITAF-208ENST00000571627 FXR2P51116 673 aaKnown RBP eCLIP16.2■□□□□ 0.18
LITAF-208ENST00000571627 FAM43BQ6ZT52 329 aaPredicted RBP16.2■□□□□ 0.18
LITAF-208ENST00000571627 RNF149Q8NC42 400 aa16.2■□□□□ 0.18
LITAF-208ENST00000571627 ERMNQ8TAM6 284 aa16.2■□□□□ 0.18
LITAF-208ENST00000571627 ASAP3Q8TDY4 903 aa16.2■□□□□ 0.18
LITAF-208ENST00000571627 TCP11Q8WWU5 503 aa16.2■□□□□ 0.18
LITAF-208ENST00000571627 MRPL38Q96DV4 380 aaKnown RBP16.2■□□□□ 0.18
LITAF-208ENST00000571627 C11orf84Q9BUA3 381 aaPredicted RBP16.2■□□□□ 0.18
LITAF-208ENST00000571627 INO80BQ9C086 356 aaPredicted RBP16.2■□□□□ 0.18
LITAF-208ENST00000571627 ELAC1Q9H777 363 aaKnown RBP16.2■□□□□ 0.18
LITAF-208ENST00000571627 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.2■□□□□ 0.18
LITAF-208ENST00000571627 RWDD3Q9Y3V2 267 aa16.2■□□□□ 0.18
LITAF-208ENST00000571627 TCF20Q9UGU0 1960 aaKnown RBP16.2■□□□□ 0.18
LITAF-208ENST00000571627 TTC28Q96AY4 2481 aa16.19■□□□□ 0.18
LITAF-208ENST00000571627 PP2D1A8MPX8 630 aa16.19■□□□□ 0.18
LITAF-208ENST00000571627 DLL1O00548 723 aa16.19■□□□□ 0.18
LITAF-208ENST00000571627 DGAT1O75907 488 aa16.19■□□□□ 0.18
LITAF-208ENST00000571627 RB1P06400 928 aa16.19■□□□□ 0.18
LITAF-208ENST00000571627 ATF7P17544 494 aaPredicted RBP16.19■□□□□ 0.18
LITAF-208ENST00000571627 RPA1P27694 616 aa16.19■□□□□ 0.18
LITAF-208ENST00000571627 CCT6AP40227 531 aaKnown RBP16.19■□□□□ 0.18
LITAF-208ENST00000571627 IL17AQ16552 155 aa16.19■□□□□ 0.18
LITAF-208ENST00000571627 ECM1Q16610 540 aa16.19■□□□□ 0.18
LITAF-208ENST00000571627 PTPROQ16827 1216 aa16.19■□□□□ 0.18
LITAF-208ENST00000571627 RILPL1Q5EBL4 403 aa16.19■□□□□ 0.18
LITAF-208ENST00000571627 TWF2Q6IBS0 349 aaKnown RBP16.19■□□□□ 0.18
LITAF-208ENST00000571627 MAEAQ7L5Y9 396 aa16.19■□□□□ 0.18
LITAF-208ENST00000571627 COL25A1Q9BXS0 654 aaPredicted RBP16.19■□□□□ 0.18
LITAF-208ENST00000571627 ALG13Q9NP73 1137 aaKnown RBP16.19■□□□□ 0.18
LITAF-208ENST00000571627 GPRC5CQ9NQ84 441 aa16.19■□□□□ 0.18
LITAF-208ENST00000571627 RNF216Q9NWF9 866 aaPredicted RBP16.19■□□□□ 0.18
LITAF-208ENST00000571627 LRWD1Q9UFC0 647 aa16.19■□□□□ 0.18
LITAF-208ENST00000571627 A0A0U1RQF3 1178 aa16.18■□□□□ 0.18
LITAF-208ENST00000571627 PHKA2P46019 1235 aa16.18■□□□□ 0.18
LITAF-208ENST00000571627 CAPSQ13938 189 aa16.18■□□□□ 0.18
LITAF-208ENST00000571627 LONRF3Q496Y0 759 aa16.18■□□□□ 0.18
LITAF-208ENST00000571627 CLLU1OSQ5K130 101 aa16.18■□□□□ 0.18
LITAF-208ENST00000571627 SPOUT1Q5T280 376 aaKnown RBP16.18■□□□□ 0.18
LITAF-208ENST00000571627 SRGAP1Q7Z6B7 1085 aa16.18■□□□□ 0.18
LITAF-208ENST00000571627 ZNF598Q86UK7 904 aaKnown RBP16.18■□□□□ 0.18
LITAF-208ENST00000571627 KLHL23Q8NBE8 558 aa16.18■□□□□ 0.18
LITAF-208ENST00000571627 CASD1Q96PB1 797 aa16.18■□□□□ 0.18
LITAF-208ENST00000571627 NACC1Q96RE7 527 aa16.18■□□□□ 0.18
LITAF-208ENST00000571627 PLVAPQ9BX97 442 aa16.18■□□□□ 0.18
LITAF-208ENST00000571627 POLR3FQ9H1D9 316 aaPredicted RBP16.18■□□□□ 0.18
LITAF-208ENST00000571627 CHST12Q9NRB3 414 aa16.18■□□□□ 0.18
LITAF-208ENST00000571627 AGPAT5Q9NUQ2 364 aa16.18■□□□□ 0.18
LITAF-208ENST00000571627 TYW1Q9NV66 732 aaKnown RBP16.18■□□□□ 0.18
LITAF-208ENST00000571627 DACT1Q9NYF0 836 aa16.18■□□□□ 0.18
LITAF-208ENST00000571627 PLAGL2Q9UPG8 496 aa16.18■□□□□ 0.18
LITAF-208ENST00000571627 ASAP2O43150 1006 aa16.17■□□□□ 0.18
LITAF-208ENST00000571627 ITGB1P05556 798 aa16.17■□□□□ 0.18
LITAF-208ENST00000571627 XRCC6P12956 609 aaKnown RBP eCLIP16.17■□□□□ 0.18
LITAF-208ENST00000571627 GLRA2P23416 452 aa16.17■□□□□ 0.18
LITAF-208ENST00000571627 CDC25AP30304 524 aa16.17■□□□□ 0.18
LITAF-208ENST00000571627 ARL2P36404 184 aa16.17■□□□□ 0.18
LITAF-208ENST00000571627 MXD4Q14582 209 aaPredicted RBP16.17■□□□□ 0.18
LITAF-208ENST00000571627 HAUS3Q68CZ6 603 aa16.17■□□□□ 0.18
LITAF-208ENST00000571627 LRRC55Q6ZSA7 311 aa16.17■□□□□ 0.18
LITAF-208ENST00000571627 IGSF22Q8N9C0 903 aa16.17■□□□□ 0.18
LITAF-208ENST00000571627 HELQQ8TDG4 1101 aa16.17■□□□□ 0.18
LITAF-208ENST00000571627 SNX29Q8TEQ0 813 aa16.17■□□□□ 0.18
LITAF-208ENST00000571627 ATXN2LQ8WWM7 1075 aaKnown RBP16.17■□□□□ 0.18
LITAF-208ENST00000571627 LPPQ93052 612 aa16.17■□□□□ 0.18
LITAF-208ENST00000571627 TMEM117Q9H0C3 514 aa16.17■□□□□ 0.18
LITAF-208ENST00000571627 FOXD4L1Q9NU39 408 aa16.17■□□□□ 0.18
LITAF-208ENST00000571627 DBR1Q9UK59 544 aaKnown RBP16.17■□□□□ 0.18
LITAF-208ENST00000571627 VPS37CA5D8V6 355 aaPredicted RBP16.16■□□□□ 0.18
LITAF-208ENST00000571627 ARHGEF35A5YM69 484 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 MEIS3P2A8K0S8 358 aa16.16■□□□□ 0.18
LITAF-208ENST00000571627 LAD1O00515 517 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms