RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 LRFN2Q9ULH4 789 aa12.41□□□□□ -0.42
SMG6-206ENST00000570668 PCDHB7Q9Y5E2 793 aa12.41□□□□□ -0.42
SMG6-206ENST00000570668 REV3LO60673 3130 aa12.4□□□□□ -0.42
SMG6-206ENST00000570668 GTPBP6O43824 516 aaPredicted RBP12.4□□□□□ -0.42
SMG6-206ENST00000570668 LINC00271P0C7V0 271 aa12.4□□□□□ -0.42
SMG6-206ENST00000570668 SYT1P21579 422 aa12.4□□□□□ -0.42
SMG6-206ENST00000570668 FGFR4P22455 802 aa12.4□□□□□ -0.42
SMG6-206ENST00000570668 SFPQP23246 707 aaKnown RBP eCLIP12.4□□□□□ -0.42
SMG6-206ENST00000570668 ARL2P36404 184 aa12.4□□□□□ -0.42
SMG6-206ENST00000570668 CCT6AP40227 531 aaKnown RBP12.4□□□□□ -0.42
SMG6-206ENST00000570668 POU5F1BQ06416 359 aa12.4□□□□□ -0.42
SMG6-206ENST00000570668 BTG3Q14201 252 aaPredicted RBP12.4□□□□□ -0.42
SMG6-206ENST00000570668 MXD4Q14582 209 aaPredicted RBP12.4□□□□□ -0.42
SMG6-206ENST00000570668 ECM1Q16610 540 aa12.4□□□□□ -0.42
SMG6-206ENST00000570668 EPC2Q52LR7 807 aa12.4□□□□□ -0.42
SMG6-206ENST00000570668 POTEGQ6S5H5 508 aa12.4□□□□□ -0.42
SMG6-206ENST00000570668 SRGAP1Q7Z6B7 1085 aa12.4□□□□□ -0.42
SMG6-206ENST00000570668 TMEM192Q8IY95 271 aa12.4□□□□□ -0.42
SMG6-206ENST00000570668 CMTR2Q8IYT2 770 aaKnown RBP12.4□□□□□ -0.42
SMG6-206ENST00000570668 CLP1Q92989 425 aaKnown RBP12.4□□□□□ -0.42
SMG6-206ENST00000570668 TRAIPQ9BWF2 469 aa12.4□□□□□ -0.42
SMG6-206ENST00000570668 CHST12Q9NRB3 414 aa12.4□□□□□ -0.42
SMG6-206ENST00000570668 TMEM161AQ9NX61 479 aa12.4□□□□□ -0.42
SMG6-206ENST00000570668 DACT1Q9NYF0 836 aa12.4□□□□□ -0.42
SMG6-206ENST00000570668 LMCD1Q9NZU5 365 aa12.4□□□□□ -0.42
SMG6-206ENST00000570668 MTCH2Q9Y6C9 303 aa12.4□□□□□ -0.42
SMG6-206ENST00000570668 A0A0U1RQF3 1178 aa12.39□□□□□ -0.43
SMG6-206ENST00000570668 VPS37CA5D8V6 355 aaPredicted RBP12.39□□□□□ -0.43
SMG6-206ENST00000570668 SRGAP2CP0DJJ0 459 aa12.39□□□□□ -0.43
SMG6-206ENST00000570668 PTENP60484 403 aa12.39□□□□□ -0.43
SMG6-206ENST00000570668 KRT79Q5XKE5 535 aa12.39□□□□□ -0.43
SMG6-206ENST00000570668 ARL6IP4Q66PJ3 421 aaKnown RBP12.39□□□□□ -0.43
SMG6-206ENST00000570668 IFNLR1Q8IU57 520 aaPredicted RBP12.39□□□□□ -0.43
SMG6-206ENST00000570668 RNF149Q8NC42 400 aa12.39□□□□□ -0.43
SMG6-206ENST00000570668 MCPH1Q8NEM0 835 aa12.39□□□□□ -0.43
SMG6-206ENST00000570668 FBXO22Q8NEZ5 403 aa12.39□□□□□ -0.43
SMG6-206ENST00000570668 SNX29Q8TEQ0 813 aa12.39□□□□□ -0.43
SMG6-206ENST00000570668 GDPD5Q8WTR4 605 aa12.39□□□□□ -0.43
SMG6-206ENST00000570668 RWDD3Q9Y3V2 267 aa12.39□□□□□ -0.43
SMG6-206ENST00000570668 RALGAPA2Q2PPJ7 1873 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 NLRC5Q86WI3 1866 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 ARHGEF35A5YM69 484 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 PP2D1A8MPX8 630 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 C5orf67F2Z3F1 127 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 H3BNC9 293 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 USO1O60763 962 aaKnown RBP12.38□□□□□ -0.43
SMG6-206ENST00000570668 EOMESO95936 686 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 BMP15O95972 392 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 RB1P06400 928 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 GLRA2P23416 452 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 BMPR1AP36894 532 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 PHKA2P46019 1235 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 GATMP50440 423 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 TFDP1Q14186 410 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 PCBP1Q15365 356 aaKnown RBP eCLIP12.38□□□□□ -0.43
SMG6-206ENST00000570668 FAM102BQ5T8I3 360 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 PADI6Q6TGC4 694 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 CATSPER4Q7RTX7 472 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 ZNF598Q86UK7 904 aaKnown RBP12.38□□□□□ -0.43
SMG6-206ENST00000570668 ECHDC2Q86YB7 292 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 SLC17A8Q8NDX2 589 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 ASAP3Q8TDY4 903 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 MMTAG2Q9BU76 263 aaKnown RBP12.38□□□□□ -0.43
SMG6-206ENST00000570668 NFKBIZQ9BYH8 718 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 MINDY3Q9H8M7 445 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 AGPAT5Q9NUQ2 364 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 KIAA1024Q9UPX6 916 aa12.38□□□□□ -0.43
SMG6-206ENST00000570668 PIN4Q9Y237 131 aaKnown RBP12.38□□□□□ -0.43
SMG6-206ENST00000570668 MRPL42Q9Y6G3 142 aaKnown RBP12.38□□□□□ -0.43
SMG6-206ENST00000570668 COL4A4P53420 1690 aaPredicted RBP12.38□□□□□ -0.43
SMG6-206ENST00000570668 FNDC1Q4ZHG4 1894 aaPredicted RBP12.38□□□□□ -0.43
SMG6-206ENST00000570668 VCANP13611 3396 aa12.37□□□□□ -0.43
SMG6-206ENST00000570668 VWA3AA6NCI4 1184 aa12.37□□□□□ -0.43
SMG6-206ENST00000570668 HOXA2O43364 376 aa12.37□□□□□ -0.43
SMG6-206ENST00000570668 ZNF623O75123 536 aa12.37□□□□□ -0.43
SMG6-206ENST00000570668 CYP11B2P19099 503 aa12.37□□□□□ -0.43
SMG6-206ENST00000570668 IBSPP21815 317 aaPredicted RBP12.37□□□□□ -0.43
SMG6-206ENST00000570668 CDC25AP30304 524 aa12.37□□□□□ -0.43
SMG6-206ENST00000570668 HOXA11P31270 313 aaPredicted RBP12.37□□□□□ -0.43
SMG6-206ENST00000570668 CTNNB1P35222 781 aa12.37□□□□□ -0.43
SMG6-206ENST00000570668 RESTQ13127 1097 aa12.37□□□□□ -0.43
SMG6-206ENST00000570668 CAPSQ13938 189 aa12.37□□□□□ -0.43
SMG6-206ENST00000570668 PAN2Q504Q3 1202 aaKnown RBP12.37□□□□□ -0.43
SMG6-206ENST00000570668 HSCBQ8IWL3 235 aa12.37□□□□□ -0.43
SMG6-206ENST00000570668 KCTD17Q8N5Z5 321 aa12.37□□□□□ -0.43
SMG6-206ENST00000570668 PLVAPQ9BX97 442 aa12.37□□□□□ -0.43
SMG6-206ENST00000570668 TMEM117Q9H0C3 514 aa12.37□□□□□ -0.43
SMG6-206ENST00000570668 POLR3FQ9H1D9 316 aaPredicted RBP12.37□□□□□ -0.43
SMG6-206ENST00000570668 BHMT2Q9H2M3 363 aa12.37□□□□□ -0.43
SMG6-206ENST00000570668 GPRC5CQ9NQ84 441 aa12.37□□□□□ -0.43
SMG6-206ENST00000570668 DDX19AQ9NUU7 478 aaKnown RBP12.37□□□□□ -0.43
SMG6-206ENST00000570668 RNF19AQ9NV58 838 aa12.37□□□□□ -0.43
SMG6-206ENST00000570668 DNM3Q9UQ16 869 aa12.37□□□□□ -0.43
SMG6-206ENST00000570668 MTMR6Q9Y217 621 aa12.37□□□□□ -0.43
SMG6-206ENST00000570668 MYO7AQ13402 2215 aa12.37□□□□□ -0.43
SMG6-206ENST00000570668 XIRP2A4UGR9 3374 aa12.36□□□□□ -0.43
SMG6-206ENST00000570668 TBKBP1A7MCY6 615 aa12.36□□□□□ -0.43
SMG6-206ENST00000570668 STX6O43752 255 aa12.36□□□□□ -0.43
SMG6-206ENST00000570668 EYA4O95677 639 aa12.36□□□□□ -0.43
SMG6-206ENST00000570668 FGFR1P11362 822 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms