RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 CSTF1Q05048 431 aaKnown RBP8.24□□□□□ -1.09
SMG6-205ENST00000570659 DMWDQ09019 674 aa8.24□□□□□ -1.09
SMG6-205ENST00000570659 SPEM2Q0P670 501 aa8.24□□□□□ -1.09
SMG6-205ENST00000570659 SRSF5Q13243 272 aaKnown RBP8.24□□□□□ -1.09
SMG6-205ENST00000570659 PHLDB3Q6NSJ2 640 aa8.24□□□□□ -1.09
SMG6-205ENST00000570659 DCLRE1AQ6PJP8 1040 aa8.24□□□□□ -1.09
SMG6-205ENST00000570659 PARM1Q6UWI2 310 aa8.24□□□□□ -1.09
SMG6-205ENST00000570659 PLPPR4Q7Z2D5 763 aa8.24□□□□□ -1.09
SMG6-205ENST00000570659 DDX53Q86TM3 631 aaKnown RBP8.24□□□□□ -1.09
SMG6-205ENST00000570659 NLRX1Q86UT6 975 aa8.24□□□□□ -1.09
SMG6-205ENST00000570659 SAMD3Q8N6K7 520 aa8.24□□□□□ -1.09
SMG6-205ENST00000570659 BBXQ8WY36 941 aaPredicted RBP8.24□□□□□ -1.09
SMG6-205ENST00000570659 DDX23Q9BUQ8 820 aaKnown RBP8.24□□□□□ -1.09
SMG6-205ENST00000570659 SFXN1Q9H9B4 322 aa8.24□□□□□ -1.09
SMG6-205ENST00000570659 AGO4Q9HCK5 861 aaKnown RBP8.24□□□□□ -1.09
SMG6-205ENST00000570659 MAN1C1Q9NR34 630 aa8.24□□□□□ -1.09
SMG6-205ENST00000570659 DZANK1Q9NVP4 752 aa8.24□□□□□ -1.09
SMG6-205ENST00000570659 RNF216Q9NWF9 866 aaPredicted RBP8.24□□□□□ -1.09
SMG6-205ENST00000570659 MARCH5Q9NX47 278 aa8.24□□□□□ -1.09
SMG6-205ENST00000570659 NCDNQ9UBB6 729 aa8.24□□□□□ -1.09
SMG6-205ENST00000570659 EPS15L1Q9UBC2 864 aa8.24□□□□□ -1.09
SMG6-205ENST00000570659 CLUHO75153 1309 aa8.24□□□□□ -1.09
SMG6-205ENST00000570659 CCDC195A0A1B0GUA6 201 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 FSD2A1L4K1 749 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 C2CD2LO14523 706 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 EDIL3O43854 480 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 ZNF862O60290 1169 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 TARSP26639 723 aaKnown RBP8.23□□□□□ -1.09
SMG6-205ENST00000570659 PPM1AP35813 382 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 NLRP11P59045 1033 aaKnown RBP8.23□□□□□ -1.09
SMG6-205ENST00000570659 STARD6P59095 220 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 PTH1RQ03431 593 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 KRT17Q04695 432 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 UGCGQ16739 394 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 WDR44Q5JSH3 913 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 N4BP2L1Q5TBK1 243 aaPredicted RBP8.23□□□□□ -1.09
SMG6-205ENST00000570659 ANKRD45Q5TZF3 282 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 KIAA0319Q5VV43 1072 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 ZNF687Q8N1G0 1237 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 NME8Q8N427 588 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 RILPL2Q969X0 211 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 ACSF2Q96CM8 615 aaPredicted RBP8.23□□□□□ -1.09
SMG6-205ENST00000570659 SH2D3AQ9BRG2 576 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 MXRA8Q9BRK3 442 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 UBAC1Q9BSL1 405 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 GBP3Q9H0R5 595 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 EPC1Q9H2F5 836 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 WDR6Q9NNW5 1121 aaKnown RBP8.23□□□□□ -1.09
SMG6-205ENST00000570659 SPATA6Q9NWH7 488 aaPredicted RBP8.23□□□□□ -1.09
SMG6-205ENST00000570659 C2orf42Q9NWW7 574 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 IGSF9Q9P2J2 1179 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 CACNG4Q9UBN1 327 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 RCAN3Q9UKA8 241 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 CDV3Q9UKY7 258 aaKnown RBP8.23□□□□□ -1.09
SMG6-205ENST00000570659 USP18Q9UMW8 372 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 PCDHA6Q9UN73 950 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 INPP5FQ9Y2H2 1132 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 PCDHA8Q9Y5H6 950 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 NBEAQ8NFP9 2946 aa8.23□□□□□ -1.09
SMG6-205ENST00000570659 A0A0U1RQF3 1178 aa8.22□□□□□ -1.09
SMG6-205ENST00000570659 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.22□□□□□ -1.09
SMG6-205ENST00000570659 CYSRT1A8MQ03 144 aa8.22□□□□□ -1.09
SMG6-205ENST00000570659 C1QTNF9BB2RNN3 333 aa8.22□□□□□ -1.09
SMG6-205ENST00000570659 FAM86B1E9PN63 330 aa8.22□□□□□ -1.09
SMG6-205ENST00000570659 GPR182O15218 404 aa8.22□□□□□ -1.09
SMG6-205ENST00000570659 INPPL1O15357 1258 aa8.22□□□□□ -1.09
SMG6-205ENST00000570659 TEX28O15482 410 aa8.22□□□□□ -1.09
SMG6-205ENST00000570659 KINO60870 393 aaKnown RBP8.22□□□□□ -1.09
SMG6-205ENST00000570659 OFD1O75665 1012 aa8.22□□□□□ -1.09
SMG6-205ENST00000570659 TOP3BO95985 862 aaKnown RBP8.22□□□□□ -1.09
SMG6-205ENST00000570659 FAM86B2P0C5J1 330 aa8.22□□□□□ -1.09
SMG6-205ENST00000570659 C1QTNF9P0C862 333 aa8.22□□□□□ -1.09
SMG6-205ENST00000570659 LAMP2P13473 410 aa8.22□□□□□ -1.09
SMG6-205ENST00000570659 RPL17P18621 184 aaKnown RBP8.22□□□□□ -1.09
SMG6-205ENST00000570659 IGFBP6P24592 240 aaPredicted RBP8.22□□□□□ -1.09
SMG6-205ENST00000570659 PMLP29590 882 aa8.22□□□□□ -1.09
SMG6-205ENST00000570659 CCDC6Q16204 474 aa8.22□□□□□ -1.09
SMG6-205ENST00000570659 SWSAP1Q6NVH7 229 aa8.22□□□□□ -1.09
SMG6-205ENST00000570659 GET4Q7L5D6 327 aaPredicted RBP8.22□□□□□ -1.09
SMG6-205ENST00000570659 METTL13Q8N6R0 699 aa8.22□□□□□ -1.09
SMG6-205ENST00000570659 IGDCC4Q8TDY8 1250 aa8.22□□□□□ -1.09
SMG6-205ENST00000570659 RABGGTAQ92696 567 aa8.22□□□□□ -1.09
SMG6-205ENST00000570659 GJA10Q969M2 543 aa8.22□□□□□ -1.09
SMG6-205ENST00000570659 TMEM169Q96HH4 297 aa8.22□□□□□ -1.09
SMG6-205ENST00000570659 PLA2G2FQ9BZM2 168 aa8.22□□□□□ -1.09
SMG6-205ENST00000570659 SLC2A4RGQ9NR83 387 aa8.22□□□□□ -1.09
SMG6-205ENST00000570659 MTCL1Q9Y4B5 1905 aaKnown RBP8.22□□□□□ -1.09
SMG6-205ENST00000570659 MYH9P35579 1960 aaKnown RBP8.21□□□□□ -1.09
SMG6-205ENST00000570659 SLC30A4O14863 429 aa8.21□□□□□ -1.1
SMG6-205ENST00000570659 CYP21A2P08686 494 aa8.21□□□□□ -1.1
SMG6-205ENST00000570659 MS4A1P11836 297 aa8.21□□□□□ -1.1
SMG6-205ENST00000570659 DARSP14868 501 aaKnown RBP8.21□□□□□ -1.1
SMG6-205ENST00000570659 SPINK2P20155 84 aa8.21□□□□□ -1.1
SMG6-205ENST00000570659 KCNA4P22459 653 aa8.21□□□□□ -1.1
SMG6-205ENST00000570659 KLRC2P26717 231 aa8.21□□□□□ -1.1
SMG6-205ENST00000570659 PHKA2P46019 1235 aa8.21□□□□□ -1.1
SMG6-205ENST00000570659 GPC3P51654 580 aa8.21□□□□□ -1.1
SMG6-205ENST00000570659 AGMOQ6ZNB7 445 aa8.21□□□□□ -1.1
SMG6-205ENST00000570659 GLYCTKQ8IVS8 523 aa8.21□□□□□ -1.1
SMG6-205ENST00000570659 KSR1Q8IVT5 923 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms