RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 LINC01465Q8N7H1 131 aa10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 RNF149Q8NC42 400 aa10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 ASAP3Q8TDY4 903 aa10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 GDPD5Q8WTR4 605 aa10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 TOP1MTQ969P6 601 aa10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 GAS2L1Q99501 681 aaPredicted RBP10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 RAD9AQ99638 391 aa10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 GCOM2Q9BZD3 368 aaPredicted RBP10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 POLR3FQ9H1D9 316 aaPredicted RBP10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 XPNPEP1Q9NQW7 623 aa10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 DDX19AQ9NUU7 478 aaKnown RBP10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 PCDHB7Q9Y5E2 793 aa10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 COL4A3BPQ9Y5P4 624 aa10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 COL6A3P12111 3177 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 IGKV6-21A0A0C4DH24 114 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 LINC01553A4QN01 128 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 STX6O43752 255 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 RPLP2P05387 115 aaKnown RBP10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 FGFR1P11362 822 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 DARSP14868 501 aaKnown RBP10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 PDCP20941 246 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 RFC5P40937 340 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 RARRES1P49788 294 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 LAMTOR4Q0VGL1 99 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 RESTQ13127 1097 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 BTG3Q14201 252 aaPredicted RBP10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 ADGRE1Q14246 886 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 E2F4Q16254 413 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 SPOUT1Q5T280 376 aaKnown RBP10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 KRT79Q5XKE5 535 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 PADI6Q6TGC4 694 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 CDR2LQ86X02 465 aaPredicted RBP10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 USP38Q8NB14 1042 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 IL27Q8NEV9 243 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 RASSF8Q8NHQ8 419 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 NEK9Q8TD19 979 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 PSPC1Q8WXF1 523 aaKnown RBP10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 SNX21Q969T3 373 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 CDK5RAP3Q96JB5 506 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 NACC1Q96RE7 527 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 BHMT2Q9H2M3 363 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 DHX33Q9H6R0 707 aaKnown RBP10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 MINDY3Q9H8M7 445 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 ATP6V0A4Q9HBG4 840 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 TUFT1Q9NNX1 390 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 TFIP11Q9UBB9 837 aaKnown RBP10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 HCSTQ9UBK5 93 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 MTMR6Q9Y217 621 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 PIN4Q9Y237 131 aaKnown RBP10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 USP20Q9Y2K6 914 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 INSL6Q9Y581 213 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 KDM3AQ9Y4C1 1321 aa10.04□□□□□ -0.8
GTF3C1-210ENST00000569394 LRRIQ4A6NIV6 560 aa10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 TBKBP1A7MCY6 615 aa10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 SFI1A8K8P3 1242 aa10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 INO80B-WBP1J3KQ70 363 aa10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 RPA1P27694 616 aa10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 ATP2C1P98194 919 aaPredicted RBP10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 ORC2Q13416 577 aaPredicted RBP10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 PKP1Q13835 747 aa10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 SKIV2LQ15477 1246 aaKnown RBP10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 TMEM132AQ24JP5 1023 aa10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 HAUS3Q68CZ6 603 aa10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 TWF2Q6IBS0 349 aaKnown RBP10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 BRAPQ7Z569 592 aa10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 FIBCD1Q8N539 461 aa10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 MAFAQ8NHW3 353 aaPredicted RBP10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 TCP11Q8WWU5 503 aa10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 LPPQ93052 612 aa10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 INTS4Q96HW7 963 aaKnown RBP10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 CPB2Q96IY4 423 aa10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 JPH2Q9BR39 696 aaPredicted RBP10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 POLR3CQ9BUI4 534 aaPredicted RBP10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 APOL6Q9BWW8 343 aa10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 FTHL17Q9BXU8 183 aa10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 RAB34Q9BZG1 259 aa10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 INO80BQ9C086 356 aaPredicted RBP10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 ANKEF1Q9NU02 776 aa10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 CDH23Q9H251 3354 aa10.03□□□□□ -0.8
GTF3C1-210ENST00000569394 CUL9Q8IWT3 2517 aa10.02□□□□□ -0.8
GTF3C1-210ENST00000569394 NPHP3-ACAD11A0A0J9YXS1 232 aa10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 DGAT1O75907 488 aa10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 SFPQP23246 707 aaKnown RBP eCLIP10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 GLRA2P23416 452 aa10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 CTNNB1P35222 781 aa10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 SARSP49591 514 aaKnown RBP10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 ODR4Q5SWX8 454 aa10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 KCNK18Q7Z418 384 aa10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 CABP7Q86V35 215 aa10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 IGSF22Q8N9C0 903 aa10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 CHAMP1Q96JM3 812 aa10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 CLIC6Q96NY7 704 aa10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 TGS1Q96RS0 853 aaKnown RBP10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 USP28Q96RU2 1077 aa10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 MMTAG2Q9BU76 263 aaKnown RBP10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 KIFC3Q9BVG8 833 aa10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 PANK2Q9BZ23 570 aa10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 IFT122Q9HBG6 1241 aa10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 PRDM6Q9NQX0 595 aa10.02□□□□□ -0.81
GTF3C1-210ENST00000569394 RGS18Q9NS28 235 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms