RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 SLC7A3Q8WY07 619 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 TMEM143Q96AN5 459 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 PABPC5Q96DU9 382 aaKnown RBP8.75□□□□□ -1.01
CDH3-209ENST00000569080 CEP170P1Q96L14 293 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 NLRP4Q96MN2 994 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 CASD1Q96PB1 797 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 JPH2Q9BR39 696 aaPredicted RBP8.75□□□□□ -1.01
CDH3-209ENST00000569080 GCOM2Q9BZD3 368 aaPredicted RBP8.75□□□□□ -1.01
CDH3-209ENST00000569080 TMEM117Q9H0C3 514 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 FOXP1Q9H334 677 aaPredicted RBP8.75□□□□□ -1.01
CDH3-209ENST00000569080 ZSWIM4Q9H7M6 989 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 TTC12Q9H892 705 aaPredicted RBP8.75□□□□□ -1.01
CDH3-209ENST00000569080 MINDY3Q9H8M7 445 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 ATP6V0A4Q9HBG4 840 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 BMP2KQ9NSY1 1161 aaPredicted RBP8.75□□□□□ -1.01
CDH3-209ENST00000569080 AGPAT5Q9NUQ2 364 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 LRFN2Q9ULH4 789 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 PCDHGC5Q9Y5F6 944 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 COL4A3BPQ9Y5P4 624 aa8.75□□□□□ -1.01
CDH3-209ENST00000569080 MEIS3P2A8K0S8 358 aa8.74□□□□□ -1.01
CDH3-209ENST00000569080 GAS2O43903 313 aaKnown RBP8.74□□□□□ -1.01
CDH3-209ENST00000569080 TBX10O75333 385 aa8.74□□□□□ -1.01
CDH3-209ENST00000569080 BAG4O95429 457 aaKnown RBP8.74□□□□□ -1.01
CDH3-209ENST00000569080 SPATA31C1P0DKV0 1188 aa8.74□□□□□ -1.01
CDH3-209ENST00000569080 IBSPP21815 317 aaPredicted RBP8.74□□□□□ -1.01
CDH3-209ENST00000569080 SFPQP23246 707 aaKnown RBP eCLIP8.74□□□□□ -1.01
CDH3-209ENST00000569080 U2AF2P26368 475 aaKnown RBP eCLIP8.74□□□□□ -1.01
CDH3-209ENST00000569080 MCM7P33993 719 aa8.74□□□□□ -1.01
CDH3-209ENST00000569080 GTF2F1P35269 517 aaKnown RBP eCLIP8.74□□□□□ -1.01
CDH3-209ENST00000569080 PHKA2P46019 1235 aa8.74□□□□□ -1.01
CDH3-209ENST00000569080 RARRES1P49788 294 aa8.74□□□□□ -1.01
CDH3-209ENST00000569080 DNM2P50570 870 aa8.74□□□□□ -1.01
CDH3-209ENST00000569080 POLGP54098 1239 aaPredicted RBP8.74□□□□□ -1.01
CDH3-209ENST00000569080 CDC42EP1Q00587 391 aa8.74□□□□□ -1.01
CDH3-209ENST00000569080 DLX2Q07687 328 aaPredicted RBP8.74□□□□□ -1.01
CDH3-209ENST00000569080 ORC2Q13416 577 aaPredicted RBP8.74□□□□□ -1.01
CDH3-209ENST00000569080 NBR1Q14596 966 aa8.74□□□□□ -1.01
CDH3-209ENST00000569080 NOSTRINQ8IVI9 506 aa8.74□□□□□ -1.01
CDH3-209ENST00000569080 LRRC43Q8N309 656 aa8.74□□□□□ -1.01
CDH3-209ENST00000569080 C4orf32Q8N8J7 132 aa8.74□□□□□ -1.01
CDH3-209ENST00000569080 COLGALT1Q8NBJ5 622 aa8.74□□□□□ -1.01
CDH3-209ENST00000569080 POF1BQ8WVV4 589 aa8.74□□□□□ -1.01
CDH3-209ENST00000569080 PRPF31Q8WWY3 499 aaKnown RBP8.74□□□□□ -1.01
CDH3-209ENST00000569080 PSPC1Q8WXF1 523 aaKnown RBP8.74□□□□□ -1.01
CDH3-209ENST00000569080 TBC1D32Q96NH3 1257 aa8.74□□□□□ -1.01
CDH3-209ENST00000569080 SCLT1Q96NL6 688 aa8.74□□□□□ -1.01
CDH3-209ENST00000569080 CHST12Q9NRB3 414 aa8.74□□□□□ -1.01
CDH3-209ENST00000569080 TYW1Q9NV66 732 aaKnown RBP8.74□□□□□ -1.01
CDH3-209ENST00000569080 PCDHA12Q9UN75 941 aa8.74□□□□□ -1.01
CDH3-209ENST00000569080 H3BQ06 376 aaPredicted RBP8.73□□□□□ -1.01
CDH3-209ENST00000569080 FSCN2O14926 492 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 LINC01565O15544 149 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 HOXA2O43364 376 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 MARCH6O60337 910 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 B4GALT3O60512 393 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 MED24O75448 989 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 FGF18O76093 207 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 CSPG5O95196 566 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 GLP2RO95838 553 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 OR52Z1P0C646 297 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 IL9P15248 144 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 ZSCAN20P17040 1043 aaPredicted RBP8.73□□□□□ -1.01
CDH3-209ENST00000569080 LAG3P18627 525 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 HOXA11P31270 313 aaPredicted RBP8.73□□□□□ -1.01
CDH3-209ENST00000569080 PBX3P40426 434 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 TXKP42681 527 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 TRAPPC10P48553 1259 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 TOB1P50616 345 aaPredicted RBP8.73□□□□□ -1.01
CDH3-209ENST00000569080 LAMTOR4Q0VGL1 99 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 SAFBQ15424 915 aaKnown RBP eCLIP8.73□□□□□ -1.01
CDH3-209ENST00000569080 AMHR2Q16671 573 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 XKR9Q5GH70 373 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 UBXN11Q5T124 520 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 FERMT3Q86UX7 667 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 IFNLR1Q8IU57 520 aaPredicted RBP8.73□□□□□ -1.01
CDH3-209ENST00000569080 TPH2Q8IWU9 490 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 ASAP3Q8TDY4 903 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 KHSRPQ92945 711 aaKnown RBP eCLIP8.73□□□□□ -1.01
CDH3-209ENST00000569080 MTRQ99707 1265 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 CD320Q9NPF0 282 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 ANKEF1Q9NU02 776 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 FAM105AQ9NUU6 356 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 RNF216Q9NWF9 866 aaPredicted RBP8.73□□□□□ -1.01
CDH3-209ENST00000569080 DACT1Q9NYF0 836 aa8.73□□□□□ -1.01
CDH3-209ENST00000569080 PIN4Q9Y237 131 aaKnown RBP8.73□□□□□ -1.01
CDH3-209ENST00000569080 GRXCR2A6NFK2 248 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 TSPAN1O60635 241 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 ZNF623O75123 536 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 DGAT1O75907 488 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 EOMESO95936 686 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 ATP2B1P20020 1258 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 GLRA2P23416 452 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 ARL2P36404 184 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 PLCB3Q01970 1234 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 UBE3AQ05086 875 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 CAPSQ13938 189 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 CSPP1Q1MSJ5 1256 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 TTC38Q5R3I4 469 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 PTCRAQ6ISU1 281 aaPredicted RBP8.72□□□□□ -1.01
CDH3-209ENST00000569080 POTEGQ6S5H5 508 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms