RNA–Protein interactions for RNA: ENST00000568919.1

SIN3A-212, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-212ENST00000568919 TCP11Q8WWU5 503 aa20.25■□□□□ 0.83
SIN3A-212ENST00000568919 PSPC1Q8WXF1 523 aaKnown RBP20.25■□□□□ 0.83
SIN3A-212ENST00000568919 P2RX5Q93086 422 aa20.25■□□□□ 0.83
SIN3A-212ENST00000568919 LMAN2LQ9H0V9 348 aa20.25■□□□□ 0.83
SIN3A-212ENST00000568919 RNF19AQ9NV58 838 aa20.25■□□□□ 0.83
SIN3A-212ENST00000568919 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.24■□□□□ 0.83
SIN3A-212ENST00000568919 ASAP2O43150 1006 aa20.24■□□□□ 0.83
SIN3A-212ENST00000568919 GAS2O43903 313 aaKnown RBP20.24■□□□□ 0.83
SIN3A-212ENST00000568919 OR52Z1P0C646 297 aa20.24■□□□□ 0.83
SIN3A-212ENST00000568919 SRGAP2CP0DJJ0 459 aa20.24■□□□□ 0.83
SIN3A-212ENST00000568919 SFPQP23246 707 aaKnown RBP eCLIP20.24■□□□□ 0.832e-7■■■■□ 20.4
SIN3A-212ENST00000568919 LAMTOR4Q0VGL1 99 aa20.24■□□□□ 0.83
SIN3A-212ENST00000568919 EMC2Q15006 297 aa20.24■□□□□ 0.83
SIN3A-212ENST00000568919 TIGD5Q53EQ6 642 aa20.24■□□□□ 0.83
SIN3A-212ENST00000568919 CATSPER3Q86XQ3 398 aa20.24■□□□□ 0.83
SIN3A-212ENST00000568919 C4orf32Q8N8J7 132 aa20.24■□□□□ 0.83
SIN3A-212ENST00000568919 KLHL23Q8NBE8 558 aa20.24■□□□□ 0.83
SIN3A-212ENST00000568919 SPPL3Q8TCT6 385 aa20.24■□□□□ 0.83
SIN3A-212ENST00000568919 CASD1Q96PB1 797 aa20.24■□□□□ 0.83
SIN3A-212ENST00000568919 TYW1Q9NV66 732 aaKnown RBP20.24■□□□□ 0.83
SIN3A-212ENST00000568919 DACT1Q9NYF0 836 aa20.24■□□□□ 0.83
SIN3A-212ENST00000568919 NOL7Q9UMY1 257 aaKnown RBP20.24■□□□□ 0.83
SIN3A-212ENST00000568919 TCF20Q9UGU0 1960 aaKnown RBP20.23■□□□□ 0.83
SIN3A-212ENST00000568919 EOMESO95936 686 aa20.23■□□□□ 0.83
SIN3A-212ENST00000568919 ITGB1P05556 798 aa20.23■□□□□ 0.83
SIN3A-212ENST00000568919 TOB1P50616 345 aaPredicted RBP20.23■□□□□ 0.83
SIN3A-212ENST00000568919 KCNQ1P51787 676 aa20.23■□□□□ 0.83
SIN3A-212ENST00000568919 CAMK1Q14012 370 aa20.23■□□□□ 0.83
SIN3A-212ENST00000568919 NBR1Q14596 966 aa20.23■□□□□ 0.83
SIN3A-212ENST00000568919 TCEAL5Q5H9L2 206 aa20.23■□□□□ 0.83
SIN3A-212ENST00000568919 SPOUT1Q5T280 376 aaKnown RBP20.23■□□□□ 0.83
SIN3A-212ENST00000568919 ZNF598Q86UK7 904 aaKnown RBP20.23■□□□□ 0.83
SIN3A-212ENST00000568919 FERMT3Q86UX7 667 aa20.23■□□□□ 0.83
SIN3A-212ENST00000568919 PIGOQ8TEQ8 1089 aa20.23■□□□□ 0.83
SIN3A-212ENST00000568919 MTRQ99707 1265 aa20.23■□□□□ 0.83
SIN3A-212ENST00000568919 TMEM117Q9H0C3 514 aa20.23■□□□□ 0.83
SIN3A-212ENST00000568919 NSUN3Q9H649 340 aaKnown RBP20.23■□□□□ 0.83
SIN3A-212ENST00000568919 TUFT1Q9NNX1 390 aa20.23■□□□□ 0.83
SIN3A-212ENST00000568919 XPNPEP1Q9NQW7 623 aa20.23■□□□□ 0.83
SIN3A-212ENST00000568919 KIF3AQ9Y496 699 aa20.23■□□□□ 0.83
SIN3A-212ENST00000568919 KIAA1671Q9BY89 1806 aa20.23■□□□□ 0.83
SIN3A-212ENST00000568919 HOXA2O43364 376 aa20.22■□□□□ 0.83
SIN3A-212ENST00000568919 MED24O75448 989 aa20.22■□□□□ 0.83
SIN3A-212ENST00000568919 DNAJB1P25685 340 aa20.22■□□□□ 0.83
SIN3A-212ENST00000568919 GJB2P29033 226 aa20.22■□□□□ 0.83
SIN3A-212ENST00000568919 RARRES1P49788 294 aa20.22■□□□□ 0.83
SIN3A-212ENST00000568919 LRRC55Q6ZSA7 311 aa20.22■□□□□ 0.83
SIN3A-212ENST00000568919 CATSPER4Q7RTX7 472 aa20.22■□□□□ 0.83
SIN3A-212ENST00000568919 SRGAP1Q7Z6B7 1085 aa20.22■□□□□ 0.83
SIN3A-212ENST00000568919 RNF169Q8NCN4 708 aa20.22■□□□□ 0.83
SIN3A-212ENST00000568919 POLR3CQ9BUI4 534 aaPredicted RBP20.22■□□□□ 0.83
SIN3A-212ENST00000568919 TRAIPQ9BWF2 469 aa20.22■□□□□ 0.83
SIN3A-212ENST00000568919 CWH43Q9H720 699 aa20.22■□□□□ 0.83
SIN3A-212ENST00000568919 HCSTQ9UBK5 93 aa20.22■□□□□ 0.83
SIN3A-212ENST00000568919 ARID2Q68CP9 1835 aa20.21■□□□□ 0.83
SIN3A-212ENST00000568919 DGAT1O75907 488 aa20.21■□□□□ 0.83
SIN3A-212ENST00000568919 ATF7P17544 494 aaPredicted RBP20.21■□□□□ 0.83
SIN3A-212ENST00000568919 RNF149Q8NC42 400 aa20.21■□□□□ 0.83
SIN3A-212ENST00000568919 ADAMTS19Q8TE59 1207 aa20.21■□□□□ 0.83
SIN3A-212ENST00000568919 UBE2ZQ9H832 354 aaPredicted RBP20.21■□□□□ 0.83
SIN3A-212ENST00000568919 MINDY3Q9H8M7 445 aa20.21■□□□□ 0.83
SIN3A-212ENST00000568919 AAASQ9NRG9 546 aa20.21■□□□□ 0.83
SIN3A-212ENST00000568919 PIN4Q9Y237 131 aaKnown RBP20.21■□□□□ 0.83
SIN3A-212ENST00000568919 PCDHB6Q9Y5E3 794 aa20.21■□□□□ 0.83
SIN3A-212ENST00000568919 PCDHB12Q9Y5F1 795 aa20.21■□□□□ 0.83
SIN3A-212ENST00000568919 RPA1P27694 616 aa20.2■□□□□ 0.82
SIN3A-212ENST00000568919 ARL2P36404 184 aa20.2■□□□□ 0.82
SIN3A-212ENST00000568919 PHKA2P46019 1235 aa20.2■□□□□ 0.82
SIN3A-212ENST00000568919 MXD4Q14582 209 aaPredicted RBP20.2■□□□□ 0.82
SIN3A-212ENST00000568919 CLLU1OSQ5K130 101 aa20.2■□□□□ 0.82
SIN3A-212ENST00000568919 TWF2Q6IBS0 349 aaKnown RBP20.2■□□□□ 0.82
SIN3A-212ENST00000568919 ABI1Q8IZP0 508 aa20.2■□□□□ 0.82
SIN3A-212ENST00000568919 ERMNQ8TAM6 284 aa20.2■□□□□ 0.82
SIN3A-212ENST00000568919 POF1BQ8WVV4 589 aa20.2■□□□□ 0.82
SIN3A-212ENST00000568919 NACC1Q96RE7 527 aa20.2■□□□□ 0.82
SIN3A-212ENST00000568919 VCANP13611 3396 aa20.2■□□□□ 0.82
SIN3A-212ENST00000568919 FXR2P51116 673 aaKnown RBP eCLIP20.19■□□□□ 0.82
SIN3A-212ENST00000568919 PTGDRQ13258 359 aa20.19■□□□□ 0.82
SIN3A-212ENST00000568919 MCTP1Q6DN14 999 aa20.19■□□□□ 0.82
SIN3A-212ENST00000568919 COLGALT1Q8NBJ5 622 aa20.19■□□□□ 0.82
SIN3A-212ENST00000568919 ASAP3Q8TDY4 903 aa20.19■□□□□ 0.82
SIN3A-212ENST00000568919 CCDC43Q96MW1 224 aaKnown RBP20.19■□□□□ 0.82
SIN3A-212ENST00000568919 BACH2Q9BYV9 841 aa20.19■□□□□ 0.82
SIN3A-212ENST00000568919 AGPAT5Q9NUQ2 364 aa20.19■□□□□ 0.82
SIN3A-212ENST00000568919 DBR1Q9UK59 544 aaKnown RBP20.19■□□□□ 0.82
SIN3A-212ENST00000568919 ATG2AQ2TAZ0 1938 aa20.19■□□□□ 0.82
SIN3A-212ENST00000568919 BRWD1Q9NSI6 2320 aa20.19■□□□□ 0.82
SIN3A-212ENST00000568919 SPTBN5Q9NRC6 3674 aaKnown RBP20.18■□□□□ 0.82
SIN3A-212ENST00000568919 ZNF623O75123 536 aa20.18■□□□□ 0.82
SIN3A-212ENST00000568919 CSPG5O95196 566 aa20.18■□□□□ 0.82
SIN3A-212ENST00000568919 SKIP12755 728 aa20.18■□□□□ 0.82
SIN3A-212ENST00000568919 HOXA11P31270 313 aaPredicted RBP20.18■□□□□ 0.82
SIN3A-212ENST00000568919 PTENP60484 403 aa20.18■□□□□ 0.82
SIN3A-212ENST00000568919 POU5F1BQ06416 359 aa20.18■□□□□ 0.82
SIN3A-212ENST00000568919 PDIA5Q14554 519 aa20.18■□□□□ 0.82
SIN3A-212ENST00000568919 COL19A1Q14993 1142 aa20.18■□□□□ 0.82
SIN3A-212ENST00000568919 HELQQ8TDG4 1101 aa20.18■□□□□ 0.82
SIN3A-212ENST00000568919 PABPC5Q96DU9 382 aaKnown RBP20.18■□□□□ 0.82
SIN3A-212ENST00000568919 FAM105AQ9NUU6 356 aa20.18■□□□□ 0.82
SIN3A-212ENST00000568919 SMC3Q9UQE7 1217 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms