RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 MAN1C1Q9NR34 630 aa19.02■□□□□ 0.64
CLK3-217ENST00000566126 SLC9A2Q9UBY0 812 aa19.02■□□□□ 0.64
CLK3-217ENST00000566126 NUMBLQ9Y6R0 609 aa19.02■□□□□ 0.64
CLK3-217ENST00000566126 GCN1Q92616 2671 aaKnown RBP19.01■□□□□ 0.63
CLK3-217ENST00000566126 PIK3CDO00329 1044 aa19.01■□□□□ 0.63
CLK3-217ENST00000566126 GDF9O60383 454 aa19.01■□□□□ 0.63
CLK3-217ENST00000566126 VTNP04004 478 aa19.01■□□□□ 0.63
CLK3-217ENST00000566126 ACTR2P61160 394 aa19.01■□□□□ 0.63
CLK3-217ENST00000566126 GPC5P78333 572 aa19.01■□□□□ 0.63
CLK3-217ENST00000566126 NMIQ13287 307 aaPredicted RBP19.01■□□□□ 0.63
CLK3-217ENST00000566126 UBXN2BQ14CS0 331 aa19.01■□□□□ 0.63
CLK3-217ENST00000566126 SEC23AQ15436 765 aa19.01■□□□□ 0.63
CLK3-217ENST00000566126 LPAL2Q16609 132 aa19.01■□□□□ 0.63
CLK3-217ENST00000566126 EMILIN2Q9BXX0 1053 aa19.01■□□□□ 0.63
CLK3-217ENST00000566126 OSBPL6Q9BZF3 934 aa19.01■□□□□ 0.63
CLK3-217ENST00000566126 ZMIZ1Q9ULJ6 1067 aa19.01■□□□□ 0.63
CLK3-217ENST00000566126 WDFY3Q8IZQ1 3526 aa19.01■□□□□ 0.63
CLK3-217ENST00000566126 SALL3Q9BXA9 1300 aa19■□□□□ 0.63
CLK3-217ENST00000566126 IGF2RP11717 2491 aa19■□□□□ 0.63
CLK3-217ENST00000566126 NBEAQ8NFP9 2946 aa19■□□□□ 0.63
CLK3-217ENST00000566126 A0A0U1RQF3 1178 aa19■□□□□ 0.63
CLK3-217ENST00000566126 FAM170BA6NMN3 283 aa19■□□□□ 0.63
CLK3-217ENST00000566126 ZBTB42B2RXF5 422 aa19■□□□□ 0.63
CLK3-217ENST00000566126 INPPL1O15357 1258 aa19■□□□□ 0.63
CLK3-217ENST00000566126 GALTP07902 379 aa19■□□□□ 0.63
CLK3-217ENST00000566126 ZSCAN20P17040 1043 aaPredicted RBP19■□□□□ 0.63
CLK3-217ENST00000566126 GRM4Q14833 912 aa19■□□□□ 0.63
CLK3-217ENST00000566126 CYP26C1Q6V0L0 522 aa19■□□□□ 0.63
CLK3-217ENST00000566126 JADE2Q9NQC1 790 aa19■□□□□ 0.63
CLK3-217ENST00000566126 PRMT8Q9NR22 394 aaPredicted RBP19■□□□□ 0.63
CLK3-217ENST00000566126 DOCK6Q96HP0 2047 aa19■□□□□ 0.63
CLK3-217ENST00000566126 SOBPA7XYQ1 873 aa18.99■□□□□ 0.63
CLK3-217ENST00000566126 HBP1O60381 514 aa18.99■□□□□ 0.63
CLK3-217ENST00000566126 LRP3O75074 770 aa18.99■□□□□ 0.63
CLK3-217ENST00000566126 RFPL2O75678 378 aa18.99■□□□□ 0.63
CLK3-217ENST00000566126 MLF2Q15773 248 aaPredicted RBP18.99■□□□□ 0.63
CLK3-217ENST00000566126 CUL5Q93034 780 aa18.99■□□□□ 0.63
CLK3-217ENST00000566126 ZNF707Q96C28 371 aaPredicted RBP18.99■□□□□ 0.63
CLK3-217ENST00000566126 UBAC1Q9BSL1 405 aa18.99■□□□□ 0.63
CLK3-217ENST00000566126 NRDE2Q9H7Z3 1164 aa18.99■□□□□ 0.63
CLK3-217ENST00000566126 LTB4R2Q9NPC1 389 aa18.99■□□□□ 0.63
CLK3-217ENST00000566126 SEMA4GQ9NTN9 838 aa18.99■□□□□ 0.63
CLK3-217ENST00000566126 COL1A2P08123 1366 aa18.98■□□□□ 0.63
CLK3-217ENST00000566126 C22orf31O95567 290 aa18.98■□□□□ 0.63
CLK3-217ENST00000566126 SSBP05455 408 aaKnown RBP eCLIP18.98■□□□□ 0.63
CLK3-217ENST00000566126 MAGEA9P43362 315 aa18.98■□□□□ 0.63
CLK3-217ENST00000566126 PRKCQQ04759 706 aa18.98■□□□□ 0.63
CLK3-217ENST00000566126 LAIR1Q6GTX8 287 aa18.98■□□□□ 0.63
CLK3-217ENST00000566126 PRR23CQ6ZRP0 262 aa18.98■□□□□ 0.63
CLK3-217ENST00000566126 PIBF1Q8WXW3 757 aa18.98■□□□□ 0.63
CLK3-217ENST00000566126 DDX1Q92499 740 aaKnown RBP18.98■□□□□ 0.63
CLK3-217ENST00000566126 SMG7Q92540 1137 aaKnown RBP18.98■□□□□ 0.63
CLK3-217ENST00000566126 CLDN23Q96B33 292 aa18.98■□□□□ 0.63
CLK3-217ENST00000566126 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.98■□□□□ 0.63
CLK3-217ENST00000566126 MTCL1Q9Y4B5 1905 aaKnown RBP18.98■□□□□ 0.63
CLK3-217ENST00000566126 IGKV6D-21A0A0A0MT36 114 aa18.97■□□□□ 0.63
CLK3-217ENST00000566126 C1QTNF9BB2RNN3 333 aa18.97■□□□□ 0.63
CLK3-217ENST00000566126 MAFGO15525 162 aa18.97■□□□□ 0.63
CLK3-217ENST00000566126 B4GALT3O60512 393 aa18.97■□□□□ 0.63
CLK3-217ENST00000566126 ATG7O95352 703 aa18.97■□□□□ 0.63
CLK3-217ENST00000566126 PAPLNO95428 1278 aa18.97■□□□□ 0.63
CLK3-217ENST00000566126 RETP07949 1114 aa18.97■□□□□ 0.63
CLK3-217ENST00000566126 C1QTNF9P0C862 333 aa18.97■□□□□ 0.63
CLK3-217ENST00000566126 MYBP10242 640 aa18.97■□□□□ 0.63
CLK3-217ENST00000566126 TDGF1P13385 188 aa18.97■□□□□ 0.63
CLK3-217ENST00000566126 CD72P21854 359 aa18.97■□□□□ 0.63
CLK3-217ENST00000566126 SLC26A2P50443 739 aa18.97■□□□□ 0.63
CLK3-217ENST00000566126 SLC44A4Q53GD3 710 aa18.97■□□□□ 0.63
CLK3-217ENST00000566126 GET4Q7L5D6 327 aaPredicted RBP18.97■□□□□ 0.63
CLK3-217ENST00000566126 FGF14Q92915 247 aa18.97■□□□□ 0.63
CLK3-217ENST00000566126 DNAJB4Q9UDY4 337 aa18.97■□□□□ 0.63
CLK3-217ENST00000566126 DSPP15924 2871 aaKnown RBP18.96■□□□□ 0.63
CLK3-217ENST00000566126 SLC11A1P49279 550 aa18.96■□□□□ 0.63
CLK3-217ENST00000566126 CSRP2Q16527 193 aa18.96■□□□□ 0.63
CLK3-217ENST00000566126 ZNF484Q5JVG2 852 aa18.96■□□□□ 0.63
CLK3-217ENST00000566126 FAM126AQ9BYI3 521 aaPredicted RBP18.96■□□□□ 0.63
CLK3-217ENST00000566126 ADAMTS10Q9H324 1103 aa18.96■□□□□ 0.63
CLK3-217ENST00000566126 TBC1D13Q9NVG8 400 aa18.96■□□□□ 0.63
CLK3-217ENST00000566126 RAB23Q9ULC3 237 aa18.96■□□□□ 0.63
CLK3-217ENST00000566126 NFASCO94856 1347 aa18.96■□□□□ 0.63
CLK3-217ENST00000566126 CARNS1A5YM72 827 aa18.95■□□□□ 0.62
CLK3-217ENST00000566126 ATP4AP20648 1035 aa18.95■□□□□ 0.62
CLK3-217ENST00000566126 TARSP26639 723 aaKnown RBP18.95■□□□□ 0.62
CLK3-217ENST00000566126 PARM1Q6UWI2 310 aa18.95■□□□□ 0.62
CLK3-217ENST00000566126 KCNH7Q9NS40 1196 aa18.95■□□□□ 0.62
CLK3-217ENST00000566126 FLNBO75369 2602 aaKnown RBP18.94■□□□□ 0.62
CLK3-217ENST00000566126 TM4SF5O14894 197 aa18.94■□□□□ 0.62
CLK3-217ENST00000566126 EIF4BP23588 611 aaKnown RBP18.94■□□□□ 0.62
CLK3-217ENST00000566126 NLRP11P59045 1033 aaKnown RBP18.94■□□□□ 0.62
CLK3-217ENST00000566126 ITGB3BPQ13352 177 aaPredicted RBP18.94■□□□□ 0.62
CLK3-217ENST00000566126 FZD5Q13467 585 aa18.94■□□□□ 0.62
CLK3-217ENST00000566126 ZBTB41Q5SVQ8 909 aa18.94■□□□□ 0.62
CLK3-217ENST00000566126 RSPO2Q6UXX9 243 aaPredicted RBP18.94■□□□□ 0.62
CLK3-217ENST00000566126 CELF5Q8N6W0 485 aaKnown RBP18.94■□□□□ 0.62
CLK3-217ENST00000566126 KDF1Q8NAX2 398 aaPredicted RBP18.94■□□□□ 0.62
CLK3-217ENST00000566126 LPPQ93052 612 aa18.94■□□□□ 0.62
CLK3-217ENST00000566126 MYL10Q9BUA6 226 aa18.94■□□□□ 0.62
CLK3-217ENST00000566126 KRT23Q9C075 422 aa18.94■□□□□ 0.62
CLK3-217ENST00000566126 MRPL17Q9NRX2 175 aaKnown RBP18.94■□□□□ 0.62
CLK3-217ENST00000566126 TEX28O15482 410 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms