RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 CLCN3P51790 818 aa14.44□□□□□ -0.1
RNF40-208ENST00000565995 RCAN1P53805 252 aa14.44□□□□□ -0.1
RNF40-208ENST00000565995 CDC42EP1Q00587 391 aa14.44□□□□□ -0.1
RNF40-208ENST00000565995 CKAP2LQ8IYA6 745 aa14.44□□□□□ -0.1
RNF40-208ENST00000565995 TDRD5Q8NAT2 981 aaKnown RBP14.44□□□□□ -0.1
RNF40-208ENST00000565995 HELQQ8TDG4 1101 aa14.44□□□□□ -0.1
RNF40-208ENST00000565995 NKD2Q969F2 451 aaPredicted RBP14.44□□□□□ -0.1
RNF40-208ENST00000565995 ZMYND12Q9H0C1 365 aa14.44□□□□□ -0.1
RNF40-208ENST00000565995 CYP26B1Q9NR63 512 aa14.44□□□□□ -0.1
RNF40-208ENST00000565995 FAM217BQ9NTX9 383 aaPredicted RBP14.44□□□□□ -0.1
RNF40-208ENST00000565995 GABBR1Q9UBS5 961 aa14.44□□□□□ -0.1
RNF40-208ENST00000565995 ASGR2P07307 311 aa14.43□□□□□ -0.1
RNF40-208ENST00000565995 NPR3P17342 541 aa14.43□□□□□ -0.1
RNF40-208ENST00000565995 AOC1P19801 751 aa14.43□□□□□ -0.1
RNF40-208ENST00000565995 RTN1Q16799 776 aa14.43□□□□□ -0.1
RNF40-208ENST00000565995 RARS2Q5T160 578 aaKnown RBP14.43□□□□□ -0.1
RNF40-208ENST00000565995 CWF19L1Q69YN2 538 aaKnown RBP14.43□□□□□ -0.1
RNF40-208ENST00000565995 VPS52Q8N1B4 723 aa14.43□□□□□ -0.1
RNF40-208ENST00000565995 TMEM169Q96HH4 297 aa14.43□□□□□ -0.1
RNF40-208ENST00000565995 IGSF21Q96ID5 467 aa14.43□□□□□ -0.1
RNF40-208ENST00000565995 NRBP2Q9NSY0 501 aa14.43□□□□□ -0.1
RNF40-208ENST00000565995 BRPF3Q9ULD4 1205 aa14.43□□□□□ -0.1
RNF40-208ENST00000565995 AKT3Q9Y243 479 aa14.43□□□□□ -0.1
RNF40-208ENST00000565995 NT5C1B-RDH14C9J2C7 533 aa14.42□□□□□ -0.1
RNF40-208ENST00000565995 ZBTB43O43298 467 aa14.42□□□□□ -0.1
RNF40-208ENST00000565995 ZNF862O60290 1169 aa14.42□□□□□ -0.1
RNF40-208ENST00000565995 ZNF623O75123 536 aa14.42□□□□□ -0.1
RNF40-208ENST00000565995 WEE2P0C1S8 567 aa14.42□□□□□ -0.1
RNF40-208ENST00000565995 EPCAMP16422 314 aa14.42□□□□□ -0.1
RNF40-208ENST00000565995 PHKA2P46019 1235 aa14.42□□□□□ -0.1
RNF40-208ENST00000565995 METAP2P50579 478 aaKnown RBP eCLIP14.42□□□□□ -0.1
RNF40-208ENST00000565995 TARBP2Q15633 366 aaKnown RBP14.42□□□□□ -0.1
RNF40-208ENST00000565995 PFKFB3Q16875 520 aaPredicted RBP14.42□□□□□ -0.1
RNF40-208ENST00000565995 TSGA10IPQ3SY00 556 aa14.42□□□□□ -0.1
RNF40-208ENST00000565995 JAKMIP3Q5VZ66 844 aa14.42□□□□□ -0.1
RNF40-208ENST00000565995 FRMD5Q7Z6J6 570 aa14.42□□□□□ -0.1
RNF40-208ENST00000565995 GPR149Q86SP6 731 aa14.42□□□□□ -0.1
RNF40-208ENST00000565995 PPFIBP1Q86W92 1011 aa14.42□□□□□ -0.1
RNF40-208ENST00000565995 CCDC105Q8IYK2 499 aa14.42□□□□□ -0.1
RNF40-208ENST00000565995 LRRC71Q8N4P6 559 aa14.42□□□□□ -0.1
RNF40-208ENST00000565995 C12orf76Q8N812 135 aaPredicted RBP14.42□□□□□ -0.1
RNF40-208ENST00000565995 LENG9Q96B70 501 aa14.42□□□□□ -0.1
RNF40-208ENST00000565995 CEP89Q96ST8 783 aa14.42□□□□□ -0.1
RNF40-208ENST00000565995 ESYT1Q9BSJ8 1104 aa14.42□□□□□ -0.1
RNF40-208ENST00000565995 STK39Q9UEW8 545 aa14.42□□□□□ -0.1
RNF40-208ENST00000565995 DBR1Q9UK59 544 aaKnown RBP14.42□□□□□ -0.1
RNF40-208ENST00000565995 PATJQ8NI35 1801 aa14.42□□□□□ -0.1
RNF40-208ENST00000565995 OTOGLQ3ZCN5 2332 aa14.41□□□□□ -0.1
RNF40-208ENST00000565995 IGKV6-21A0A0C4DH24 114 aa14.41□□□□□ -0.1
RNF40-208ENST00000565995 WDR64B1ANS9 1081 aa14.41□□□□□ -0.1
RNF40-208ENST00000565995 ADAMTS3O15072 1205 aa14.41□□□□□ -0.1
RNF40-208ENST00000565995 OATP04181 439 aa14.41□□□□□ -0.1
RNF40-208ENST00000565995 GALTP07902 379 aa14.41□□□□□ -0.1
RNF40-208ENST00000565995 CDC27P30260 824 aa14.41□□□□□ -0.1
RNF40-208ENST00000565995 TDGQ13569 410 aa14.41□□□□□ -0.1
RNF40-208ENST00000565995 KANK3Q6NY19 840 aa14.41□□□□□ -0.1
RNF40-208ENST00000565995 TMEM173Q86WV6 379 aaPredicted RBP14.41□□□□□ -0.1
RNF40-208ENST00000565995 ACSF2Q96CM8 615 aaPredicted RBP14.41□□□□□ -0.1
RNF40-208ENST00000565995 RTP3Q9BQQ7 232 aa14.41□□□□□ -0.1
RNF40-208ENST00000565995 NIFKQ9BYG3 293 aaKnown RBP14.41□□□□□ -0.1
RNF40-208ENST00000565995 RHOBTB2Q9BYZ6 727 aa14.41□□□□□ -0.1
RNF40-208ENST00000565995 MFSD1Q9H3U5 465 aa14.41□□□□□ -0.1
RNF40-208ENST00000565995 NRDE2Q9H7Z3 1164 aa14.41□□□□□ -0.1
RNF40-208ENST00000565995 DUSP12Q9UNI6 340 aa14.41□□□□□ -0.1
RNF40-208ENST00000565995 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.4□□□□□ -0.1
RNF40-208ENST00000565995 PI15O43692 258 aa14.4□□□□□ -0.1
RNF40-208ENST00000565995 EDIL3O43854 480 aa14.4□□□□□ -0.1
RNF40-208ENST00000565995 LILRB3O75022 631 aa14.4□□□□□ -0.1
RNF40-208ENST00000565995 PAPLNO95428 1278 aa14.4□□□□□ -0.1
RNF40-208ENST00000565995 SKIP12755 728 aa14.4□□□□□ -0.1
RNF40-208ENST00000565995 ID4P47928 161 aa14.4□□□□□ -0.1
RNF40-208ENST00000565995 C15orf39Q6ZRI6 1047 aa14.4□□□□□ -0.1
RNF40-208ENST00000565995 DHX32Q7L7V1 743 aaKnown RBP14.4□□□□□ -0.1
RNF40-208ENST00000565995 OTOP3Q7RTS5 596 aa14.4□□□□□ -0.1
RNF40-208ENST00000565995 ADSSL1Q8N142 457 aa14.4□□□□□ -0.1
RNF40-208ENST00000565995 RNF169Q8NCN4 708 aa14.4□□□□□ -0.1
RNF40-208ENST00000565995 RIT2Q99578 217 aa14.4□□□□□ -0.1
RNF40-208ENST00000565995 VN1R3Q9BXE9 311 aa14.4□□□□□ -0.1
RNF40-208ENST00000565995 SEMA4AQ9H3S1 761 aa14.4□□□□□ -0.1
RNF40-208ENST00000565995 SFXN1Q9H9B4 322 aa14.4□□□□□ -0.1
RNF40-208ENST00000565995 DISC1Q9NRI5 854 aa14.4□□□□□ -0.1
RNF40-208ENST00000565995 TBC1D13Q9NVG8 400 aa14.4□□□□□ -0.1
RNF40-208ENST00000565995 IGSF9Q9P2J2 1179 aa14.4□□□□□ -0.1
RNF40-208ENST00000565995 STBD1O95210 358 aa14.39□□□□□ -0.11
RNF40-208ENST00000565995 FGFR4P22455 802 aa14.39□□□□□ -0.11
RNF40-208ENST00000565995 SFNP31947 248 aa14.39□□□□□ -0.11
RNF40-208ENST00000565995 CLCN4P51793 760 aa14.39□□□□□ -0.11
RNF40-208ENST00000565995 PRKCEQ02156 737 aa14.39□□□□□ -0.11
RNF40-208ENST00000565995 PTPN14Q15678 1187 aa14.39□□□□□ -0.11
RNF40-208ENST00000565995 PRR16Q569H4 304 aa14.39□□□□□ -0.11
RNF40-208ENST00000565995 RNF20Q5VTR2 975 aa14.39□□□□□ -0.11
RNF40-208ENST00000565995 TRMT1LQ7Z2T5 733 aaKnown RBP14.39□□□□□ -0.11
RNF40-208ENST00000565995 CABP7Q86V35 215 aa14.39□□□□□ -0.11
RNF40-208ENST00000565995 REXO1Q8N1G1 1221 aaKnown RBP14.39□□□□□ -0.11
RNF40-208ENST00000565995 CMASQ8NFW8 434 aaPredicted RBP14.39□□□□□ -0.11
RNF40-208ENST00000565995 FEZF2Q8TBJ5 459 aa14.39□□□□□ -0.11
RNF40-208ENST00000565995 CCDC12Q8WUD4 166 aaPredicted RBP14.39□□□□□ -0.11
RNF40-208ENST00000565995 BCL7CQ8WUZ0 217 aaPredicted RBP14.39□□□□□ -0.11
RNF40-208ENST00000565995 AUTS2Q8WXX7 1259 aa14.39□□□□□ -0.11
RNF40-208ENST00000565995 GCOM2Q9BZD3 368 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms