RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 CPXCR1Q8N123 301 aa5.68□□□□□ -1.5
CAPN3-214ENST00000565274 CCAR2Q8N163 923 aaKnown RBP5.68□□□□□ -1.5
CAPN3-214ENST00000565274 KCT2Q8NC54 265 aa5.68□□□□□ -1.5
CAPN3-214ENST00000565274 FBXO18Q8NFZ0 1043 aa5.68□□□□□ -1.5
CAPN3-214ENST00000565274 KCNG4Q8TDN1 519 aa5.68□□□□□ -1.5
CAPN3-214ENST00000565274 ATXN2LQ8WWM7 1075 aaKnown RBP5.68□□□□□ -1.5
CAPN3-214ENST00000565274 EDC3Q96F86 508 aaKnown RBP5.68□□□□□ -1.5
CAPN3-214ENST00000565274 SCLT1Q96NL6 688 aa5.68□□□□□ -1.5
CAPN3-214ENST00000565274 MKNK1Q9BUB5 465 aa5.68□□□□□ -1.5
CAPN3-214ENST00000565274 FAM126AQ9BYI3 521 aaPredicted RBP5.68□□□□□ -1.5
CAPN3-214ENST00000565274 SIL1Q9H173 461 aa5.68□□□□□ -1.5
CAPN3-214ENST00000565274 SEMA4AQ9H3S1 761 aa5.68□□□□□ -1.5
CAPN3-214ENST00000565274 C7orf69Q9H7B7 122 aa5.68□□□□□ -1.5
CAPN3-214ENST00000565274 TMEM165Q9HC07 324 aa5.68□□□□□ -1.5
CAPN3-214ENST00000565274 SMYD2Q9NRG4 433 aa5.68□□□□□ -1.5
CAPN3-214ENST00000565274 UBAP1Q9NZ09 502 aa5.68□□□□□ -1.5
CAPN3-214ENST00000565274 LMCD1Q9NZU5 365 aa5.68□□□□□ -1.5
CAPN3-214ENST00000565274 DKK3Q9UBP4 350 aa5.68□□□□□ -1.5
CAPN3-214ENST00000565274 FBXO10Q9UK96 956 aa5.68□□□□□ -1.5
CAPN3-214ENST00000565274 ZMIZ1Q9ULJ6 1067 aa5.68□□□□□ -1.5
CAPN3-214ENST00000565274 PNMA8BQ9ULN7 279 aaPredicted RBP5.68□□□□□ -1.5
CAPN3-214ENST00000565274 DAAM1Q9Y4D1 1078 aa5.68□□□□□ -1.5
CAPN3-214ENST00000565274 MAST3O60307 1309 aa5.68□□□□□ -1.5
CAPN3-214ENST00000565274 MAP3K15Q6ZN16 1313 aa5.68□□□□□ -1.5
CAPN3-214ENST00000565274 CARMIL3Q8ND23 1372 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 PAPPAQ13219 1627 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 ATRNO75882 1429 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 FOXP2O15409 715 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 SCGB1D2O95969 90 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 IFIT1P09914 478 aaKnown RBP5.67□□□□□ -1.5
CAPN3-214ENST00000565274 HOXD8P13378 290 aaPredicted RBP5.67□□□□□ -1.5
CAPN3-214ENST00000565274 CMA1P23946 247 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 TPP2P29144 1249 aaPredicted RBP5.67□□□□□ -1.5
CAPN3-214ENST00000565274 GRIK1P39086 918 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 KIF11P52732 1056 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 SERINC3Q13530 473 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 UBE3CQ15386 1083 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 PUM3Q15397 648 aaKnown RBP5.67□□□□□ -1.5
CAPN3-214ENST00000565274 FAM26DQ5JW98 314 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 TMEM164Q5U3C3 297 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 HIBCHQ6NVY1 386 aaPredicted RBP5.67□□□□□ -1.5
CAPN3-214ENST00000565274 FAM173BQ6P4H8 233 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 ADAMTSL4Q6UY14 1074 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 CEP68Q76N32 757 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 MCF2L2Q86YR7 1114 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 JAMLQ86YT9 394 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 LURAP1LQ8IV03 231 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 DHX40Q8IX18 779 aaKnown RBP5.67□□□□□ -1.5
CAPN3-214ENST00000565274 CEP57L1Q8IYX8 460 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 ANKRD42Q8N9B4 389 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 LINC00301Q8NCQ3 95 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 OR13H1Q8NG92 308 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 ERMNQ8TAM6 284 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 TBC1D5Q92609 795 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 APPBP2Q92624 585 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 JAKMIP2Q96AA8 810 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 RBM18Q96H35 190 aaKnown RBP5.67□□□□□ -1.5
CAPN3-214ENST00000565274 RBM17Q96I25 401 aaKnown RBP5.67□□□□□ -1.5
CAPN3-214ENST00000565274 TACO1Q9BSH4 297 aaKnown RBP5.67□□□□□ -1.5
CAPN3-214ENST00000565274 SRRTQ9BXP5 876 aaKnown RBP5.67□□□□□ -1.5
CAPN3-214ENST00000565274 AP1M1Q9BXS5 423 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 NAT10Q9H0A0 1025 aaKnown RBP5.67□□□□□ -1.5
CAPN3-214ENST00000565274 KANSL2Q9H9L4 492 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 DBNDD1Q9H9R9 158 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 MRGBPQ9NV56 204 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 SEPT10Q9P0V9 454 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 NOVA2Q9UNW9 492 aaKnown RBP5.67□□□□□ -1.5
CAPN3-214ENST00000565274 RNF114Q9Y508 228 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 IPPQ9Y573 584 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 PCDHGB3Q9Y5G1 929 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 MAGED1Q9Y5V3 778 aaPredicted RBP5.67□□□□□ -1.5
CAPN3-214ENST00000565274 PHLPP2Q6ZVD8 1323 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 ARFGEF2Q9Y6D5 1785 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 NID2Q14112 1375 aa5.67□□□□□ -1.5
CAPN3-214ENST00000565274 NUP188Q5SRE5 1749 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 A0A1B0GUL7 405 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 KLRG2A4D1S0 409 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-214ENST00000565274 LRRC10BA6NIK2 292 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 BECN2A8MW95 431 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 KIAA1324LA8MWY0 1029 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-214ENST00000565274 AKR1B15C9JRZ8 316 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-214ENST00000565274 IKBKBO14920 756 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 FSCN2O14926 492 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 SART1O43290 800 aaKnown RBP5.66□□□□□ -1.5
CAPN3-214ENST00000565274 ATP8B1O43520 1251 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 KPNA6O60684 536 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 GNAT2P19087 354 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 CYP2C19P33261 490 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 ZNF76P36508 570 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 SKIV2L2P42285 1042 aaKnown RBP5.66□□□□□ -1.5
CAPN3-214ENST00000565274 HALP42357 657 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 MATR3P43243 847 aaKnown RBP eCLIP5.66□□□□□ -1.5
CAPN3-214ENST00000565274 TIMM10P62072 90 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 KRT83P78385 493 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 PFKPQ01813 784 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 GRIK3Q13003 919 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 TNIP1Q15025 636 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 TTF1Q15361 905 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-214ENST00000565274 IMMTQ16891 758 aaKnown RBP5.66□□□□□ -1.5
CAPN3-214ENST00000565274 KBTBD12Q3ZCT8 623 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms