RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 ABI1Q8IZP0 508 aa20.76■□□□□ 0.91
CLN6-204ENST00000564752 LRRC43Q8N309 656 aa20.76■□□□□ 0.91
CLN6-204ENST00000564752 SH2D3AQ9BRG2 576 aa20.76■□□□□ 0.91
CLN6-204ENST00000564752 GCOM2Q9BZD3 368 aaPredicted RBP20.76■□□□□ 0.91
CLN6-204ENST00000564752 CHST12Q9NRB3 414 aa20.76■□□□□ 0.91
CLN6-204ENST00000564752 GJB4Q9NTQ9 266 aa20.76■□□□□ 0.91
CLN6-204ENST00000564752 PUF60Q9UHX1 559 aaKnown RBP20.76■□□□□ 0.91
CLN6-204ENST00000564752 FSD2A1L4K1 749 aa20.75■□□□□ 0.91
CLN6-204ENST00000564752 DDX11L8A8MPP1 907 aa20.75■□□□□ 0.91
CLN6-204ENST00000564752 SLC37A4O43826 429 aa20.75■□□□□ 0.91
CLN6-204ENST00000564752 MAFO75444 373 aaPredicted RBP20.75■□□□□ 0.91
CLN6-204ENST00000564752 CSDE1O75534 798 aaKnown RBP20.75■□□□□ 0.91
CLN6-204ENST00000564752 HERC4Q5GLZ8 1057 aaPredicted RBP20.75■□□□□ 0.91
CLN6-204ENST00000564752 CLLU1OSQ5K130 101 aa20.75■□□□□ 0.91
CLN6-204ENST00000564752 RNF135Q8IUD6 432 aa20.75■□□□□ 0.91
CLN6-204ENST00000564752 RNF169Q8NCN4 708 aa20.75■□□□□ 0.91
CLN6-204ENST00000564752 VN1R2Q8NFZ6 395 aa20.75■□□□□ 0.91
CLN6-204ENST00000564752 ZNF558Q96NG5 402 aa20.75■□□□□ 0.91
CLN6-204ENST00000564752 DACT1Q9NYF0 836 aa20.75■□□□□ 0.91
CLN6-204ENST00000564752 TRIOO75962 3097 aa20.75■□□□□ 0.91
CLN6-204ENST00000564752 MUC6Q6W4X9 2439 aa20.74■□□□□ 0.91
CLN6-204ENST00000564752 EML1O00423 815 aa20.74■□□□□ 0.91
CLN6-204ENST00000564752 ATF7P17544 494 aaPredicted RBP20.74■□□□□ 0.91
CLN6-204ENST00000564752 PPM1AP35813 382 aa20.74■□□□□ 0.91
CLN6-204ENST00000564752 PSMC5P62195 406 aa20.74■□□□□ 0.91
CLN6-204ENST00000564752 RBM10P98175 930 aaKnown RBP20.74■□□□□ 0.91
CLN6-204ENST00000564752 LETM2Q2VYF4 491 aa20.74■□□□□ 0.91
CLN6-204ENST00000564752 ANO5Q75V66 913 aa20.74■□□□□ 0.91
CLN6-204ENST00000564752 NSUN7Q8NE18 718 aaKnown RBP20.74■□□□□ 0.91
CLN6-204ENST00000564752 BRMS1Q9HCU9 246 aa20.74■□□□□ 0.91
CLN6-204ENST00000564752 KCNMB3Q9NPA1 279 aa20.74■□□□□ 0.91
CLN6-204ENST00000564752 NGRNQ9NPE2 291 aaKnown RBP20.74■□□□□ 0.91
CLN6-204ENST00000564752 SUCLA2Q9P2R7 463 aaPredicted RBP20.74■□□□□ 0.91
CLN6-204ENST00000564752 MUTYHQ9UIF7 546 aa20.74■□□□□ 0.91
CLN6-204ENST00000564752 USP15Q9Y4E8 981 aaPredicted RBP20.74■□□□□ 0.91
CLN6-204ENST00000564752 A0A087WZ62 844 aa20.73■□□□□ 0.91
CLN6-204ENST00000564752 FDPSP14324 419 aaKnown RBP20.73■□□□□ 0.91
CLN6-204ENST00000564752 PBX3P40426 434 aa20.73■□□□□ 0.91
CLN6-204ENST00000564752 KRT17Q04695 432 aa20.73■□□□□ 0.91
CLN6-204ENST00000564752 PPP2R5CQ13362 524 aa20.73■□□□□ 0.91
CLN6-204ENST00000564752 KCNC3Q14003 757 aa20.73■□□□□ 0.91
CLN6-204ENST00000564752 PLPP4Q5VZY2 271 aa20.73■□□□□ 0.91
CLN6-204ENST00000564752 PPP4R3AQ6IN85 833 aa20.73■□□□□ 0.91
CLN6-204ENST00000564752 TMEM184AQ6ZMB5 413 aa20.73■□□□□ 0.91
CLN6-204ENST00000564752 NEK8Q86SG6 692 aa20.73■□□□□ 0.91
CLN6-204ENST00000564752 ZNF410Q86VK4 478 aa20.73■□□□□ 0.91
CLN6-204ENST00000564752 HELQQ8TDG4 1101 aa20.73■□□□□ 0.91
CLN6-204ENST00000564752 FAM20AQ96MK3 541 aa20.73■□□□□ 0.91
CLN6-204ENST00000564752 TCF25Q9BQ70 676 aa20.73■□□□□ 0.91
CLN6-204ENST00000564752 FDXACB1Q9BRP7 624 aaPredicted RBP20.73■□□□□ 0.91
CLN6-204ENST00000564752 TRAIPQ9BWF2 469 aa20.73■□□□□ 0.91
CLN6-204ENST00000564752 SPG21Q9NZD8 308 aa20.73■□□□□ 0.91
CLN6-204ENST00000564752 VAV3Q9UKW4 847 aa20.73■□□□□ 0.91
CLN6-204ENST00000564752 PLXNA4Q9HCM2 1894 aa20.73■□□□□ 0.91
CLN6-204ENST00000564752 LOC730098B7Z3J9 87 aa20.72■□□□□ 0.91
CLN6-204ENST00000564752 KRT2P35908 639 aa20.72■□□□□ 0.91
CLN6-204ENST00000564752 CBX2Q14781 532 aaPredicted RBP20.72■□□□□ 0.91
CLN6-204ENST00000564752 PIK3AP1Q6ZUJ8 805 aa20.72■□□□□ 0.91
CLN6-204ENST00000564752 RHPN2Q8IUC4 686 aa20.72■□□□□ 0.91
CLN6-204ENST00000564752 OXER1Q8TDS5 423 aa20.72■□□□□ 0.91
CLN6-204ENST00000564752 SUSD6Q92537 303 aa20.72■□□□□ 0.91
CLN6-204ENST00000564752 JPH2Q9BR39 696 aaPredicted RBP20.72■□□□□ 0.91
CLN6-204ENST00000564752 INO80BQ9C086 356 aaPredicted RBP20.72■□□□□ 0.91
CLN6-204ENST00000564752 HIDE1A8MVS5 230 aa20.71■□□□□ 0.91
CLN6-204ENST00000564752 JAK2O60674 1132 aa20.71■□□□□ 0.91
CLN6-204ENST00000564752 GCFC2P16383 781 aaKnown RBP20.71■□□□□ 0.91
CLN6-204ENST00000564752 SFPQP23246 707 aaKnown RBP eCLIP20.71■□□□□ 0.91
CLN6-204ENST00000564752 PHKA2P46019 1235 aa20.71■□□□□ 0.91
CLN6-204ENST00000564752 QARSP47897 775 aaKnown RBP20.71■□□□□ 0.91
CLN6-204ENST00000564752 TRIM29Q14134 588 aa20.71■□□□□ 0.91
CLN6-204ENST00000564752 ALYREFQ86V81 257 aaKnown RBP20.71■□□□□ 0.91
CLN6-204ENST00000564752 SLC39A11Q8N1S5 342 aa20.71■□□□□ 0.91
CLN6-204ENST00000564752 NAP1L4Q99733 375 aaKnown RBP20.71■□□□□ 0.91
CLN6-204ENST00000564752 PHF7Q9BWX1 381 aaPredicted RBP20.71■□□□□ 0.91
CLN6-204ENST00000564752 S1PR5Q9H228 398 aa20.71■□□□□ 0.91
CLN6-204ENST00000564752 ENTPD7Q9NQZ7 604 aa20.71■□□□□ 0.91
CLN6-204ENST00000564752 CYP26B1Q9NR63 512 aa20.71■□□□□ 0.91
CLN6-204ENST00000564752 LIMCH1Q9UPQ0 1083 aa20.71■□□□□ 0.91
CLN6-204ENST00000564752 TBX3O15119 743 aa20.7■□□□□ 0.9
CLN6-204ENST00000564752 DKC1O60832 514 aaKnown RBP eCLIP20.7■□□□□ 0.9
CLN6-204ENST00000564752 P4HBP07237 508 aaKnown RBP20.7■□□□□ 0.9
CLN6-204ENST00000564752 SRGAP2BP0DMP2 458 aa20.7■□□□□ 0.9
CLN6-204ENST00000564752 FOSBP53539 338 aa20.7■□□□□ 0.9
CLN6-204ENST00000564752 ST3GAL1Q11201 340 aa20.7■□□□□ 0.9
CLN6-204ENST00000564752 PLA2G4FQ68DD2 849 aa20.7■□□□□ 0.9
CLN6-204ENST00000564752 TMC7Q7Z402 723 aa20.7■□□□□ 0.9
CLN6-204ENST00000564752 KSR1Q8IVT5 923 aa20.7■□□□□ 0.9
CLN6-204ENST00000564752 EDAQ92838 391 aa20.7■□□□□ 0.9
CLN6-204ENST00000564752 HAS1Q92839 578 aa20.7■□□□□ 0.9
CLN6-204ENST00000564752 MRPL9Q9BYD2 267 aaKnown RBP20.7■□□□□ 0.9
CLN6-204ENST00000564752 CCNT1O60563 726 aaKnown RBP20.69■□□□□ 0.9
CLN6-204ENST00000564752 SKIP12755 728 aa20.69■□□□□ 0.9
CLN6-204ENST00000564752 TECP42680 631 aa20.69■□□□□ 0.9
CLN6-204ENST00000564752 ALDH7A1P49419 539 aaKnown RBP20.69■□□□□ 0.9
CLN6-204ENST00000564752 NPEPPSP55786 919 aa20.69■□□□□ 0.9
CLN6-204ENST00000564752 NR5A1Q13285 461 aa20.69■□□□□ 0.9
CLN6-204ENST00000564752 TWF2Q6IBS0 349 aaKnown RBP20.69■□□□□ 0.9
CLN6-204ENST00000564752 ANKRD54Q6NXT1 300 aa20.69■□□□□ 0.9
CLN6-204ENST00000564752 HFE2Q6ZVN8 426 aa20.69■□□□□ 0.9
CLN6-204ENST00000564752 MRPL43Q8N983 215 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms