RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 CETN3O15182 167 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 DUSP11O75319 330 aaKnown RBP8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 IPO7O95373 1038 aaKnown RBP8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ARIH2O95376 493 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 SLU7O95391 586 aaKnown RBP8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ARP10275 920 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 CASQ1P31415 396 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 GNG11P61952 73 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 PSMC6P62333 389 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 MRPS9P82933 396 aaKnown RBP8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ZBED6P86452 979 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 PPP2R3AQ06190 1150 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 MTF1Q14872 753 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 BMT2Q1RMZ1 405 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 GNPTABQ3T906 1256 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 DUSP28Q4G0W2 176 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ARHGAP29Q52LW3 1261 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ARSHQ5FYA8 562 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 XRRA1Q6P2D8 792 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 NLRX1Q86UT6 975 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 VSIG10LQ86VR7 867 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ZC3H3Q8IXZ2 948 aaKnown RBP8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ANKLE1Q8NAG6 615 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 GLIS3Q8NEA6 775 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 SCFD1Q8WVM8 642 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 PAWRQ96IZ0 340 aaKnown RBP8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 NACC1Q96RE7 527 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 MAP7D2Q96T17 732 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 HSD17B14Q9BPX1 270 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 RUSC1Q9BVN2 902 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 NDST4Q9H3R1 872 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 UNC45AQ9H3U1 944 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 MTMR10Q9NXD2 777 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 RGL1Q9NZL6 768 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 SEL1LQ9UBV2 794 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ODF2LQ9ULJ1 636 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 UBIAD1Q9Y5Z9 338 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 BDP1A6H8Y1 2624 aa8.16□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ARHGEF35A5YM69 484 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 DDX39AO00148 427 aaKnown RBP8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 PDXKO00764 312 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 NKRFO15226 690 aaKnown RBP eCLIP8.15□□□□□ -1.13e-6■■□□□ 12.3
MAP1LC3B-205ENST00000564638 EIF3DO15371 548 aaKnown RBP eCLIP8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 SLC16A3O15427 465 aaKnown RBP8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 KIF5CO60282 957 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ADAMTS4O75173 837 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 STAM2O75886 525 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 RGS20O76081 388 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 GCNT3O95395 438 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 GGPS1O95749 300 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 GH1P01241 217 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 MYL3P08590 195 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ITGB5P18084 799 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 RPL13P26373 211 aaKnown RBP8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 CYLC1P35663 651 aaPredicted RBP8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 JAK3P52333 1124 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ATN1P54259 1190 aaPredicted RBP8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 MARSP56192 900 aaKnown RBP8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 GJA9P57773 515 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 SP4Q02446 784 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 MTMR1Q13613 665 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 KCNA10Q16322 511 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 KNOP1Q1ED39 458 aaKnown RBP8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 GNASQ5JWF2 1037 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 RINT1Q6NUQ1 792 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 TRIM65Q6PJ69 517 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 B3GNT9Q6UX72 402 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 EPM2AIP1Q7L775 607 aaPredicted RBP8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 NECAB2Q7Z6G3 386 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 DHX37Q8IY37 1157 aaKnown RBP8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 DEFB123Q8N688 67 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 NEK11Q8NG66 645 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 VTI1AQ96AJ9 217 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 EEF2KMTQ96G04 330 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 CCDC43Q96MW1 224 aaKnown RBP8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 LXNQ9BS40 222 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 FGFBP2Q9BYJ0 223 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 EDEM3Q9BZQ6 932 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 TTYH3Q9C0H2 523 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 SENP6Q9GZR1 1112 aaPredicted RBP8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 UPF3AQ9H1J1 476 aaKnown RBP8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 KCTD10Q9H3F6 313 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 C11orf49Q9H6J7 331 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 MRPL44Q9H9J2 332 aaKnown RBP8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 L2HGDHQ9H9P8 463 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 AGO4Q9HCK5 861 aaKnown RBP8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 JADE2Q9NQC1 790 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 OLFML3Q9NRN5 406 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 KCNH7Q9NS40 1196 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 TBC1D22BQ9NU19 505 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 TYW1Q9NV66 732 aaKnown RBP8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 GNEQ9Y223 722 aaKnown RBP8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 TRAF3IP3Q9Y228 551 aa8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.15□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ALPK3Q96L96 1907 aa8.15□□□□□ -1.11
MAP1LC3B-205ENST00000564638 MYH9P35579 1960 aaKnown RBP8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 RSPH10B2B2RC85 870 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 RNF225M0QZC1 329 aaPredicted RBP8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 DNM1LO00429 736 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms