RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 CASTP20810 708 aaKnown RBP6.34□□□□□ -1.39
CHD9-210ENST00000564582 FBLN1P23142 703 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 PTGS1P23219 599 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 PMLP29590 882 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 CCT4P50991 539 aaKnown RBP6.34□□□□□ -1.39
CHD9-210ENST00000564582 GUCY1A3Q02108 690 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 SMC1AQ14683 1233 aaKnown RBP6.34□□□□□ -1.39
CHD9-210ENST00000564582 STX1AQ16623 288 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 CCDC93Q567U6 631 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 HSP90AB4PQ58FF6 505 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 VPS53Q5VIR6 699 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 ETV3LQ6ZN32 361 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 ZC3H18Q86VM9 953 aaKnown RBP6.34□□□□□ -1.39
CHD9-210ENST00000564582 FMNL3Q8IVF7 1028 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 TRIM48Q8IWZ4 208 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 CEP57L1Q8IYX8 460 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 SH3TC2Q8TF17 1288 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 PLEKHF1Q96S99 279 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 MRPL4Q9BYD3 311 aaKnown RBP6.34□□□□□ -1.39
CHD9-210ENST00000564582 CLSTN2Q9H4D0 955 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 SMOC1Q9H4F8 434 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 PCDH18Q9HCL0 1135 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 TERF2IPQ9NYB0 399 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 STAP2Q9UGK3 403 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 NDOR1Q9UHB4 597 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 PCDHB4Q9Y5E5 795 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 CPSF1Q10570 1443 aaKnown RBP6.33□□□□□ -1.4
CHD9-210ENST00000564582 NSD3Q9BZ95 1437 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 MYO5CQ9NQX4 1742 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 GSTA4O15217 222 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 RAB11FIP3O75154 756 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 GNAI3P08754 354 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 NBPF7P0C2Y1 421 aaPredicted RBP6.33□□□□□ -1.4
CHD9-210ENST00000564582 ZKSCAN1P17029 563 aaPredicted RBP6.33□□□□□ -1.4
CHD9-210ENST00000564582 PI3P19957 117 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 SYT1P21579 422 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 SFPQP23246 707 aaKnown RBP eCLIP6.33□□□□□ -1.4
CHD9-210ENST00000564582 HSPA4P34932 840 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 TDO2P48775 406 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 CACNB2Q08289 660 aaPredicted RBP6.33□□□□□ -1.4
CHD9-210ENST00000564582 MAP9Q49MG5 647 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 ARHGAP29Q52LW3 1261 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 CNKSR3Q6P9H4 555 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 SYT10Q6XYQ8 523 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 TAX1BP1Q86VP1 789 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 CEP112Q8N8E3 955 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 SPC24Q8NBT2 197 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 FAM71BQ8TC56 605 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 PSMD1Q99460 953 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 KCNJ15Q99712 375 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 JAM3Q9BX67 310 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 CDIP1Q9H305 208 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 PIF1Q9H611 641 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 VIPAS39Q9H9C1 493 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 SLC6A20Q9NP91 592 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 ORC3Q9UBD5 711 aaPredicted RBP6.33□□□□□ -1.4
CHD9-210ENST00000564582 MYOTQ9UBF9 498 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 PPARGC1AQ9UBK2 798 aaKnown RBP6.33□□□□□ -1.4
CHD9-210ENST00000564582 ADAM21Q9UKJ8 722 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 EFCAB6Q5THR3 1501 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 SHPRHQ149N8 1683 aa6.33□□□□□ -1.4
CHD9-210ENST00000564582 ARHGEF10O15013 1369 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 PNPLA6Q8IY17 1366 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 TTC21BQ7Z4L5 1316 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 ANKRD18BA2A2Z9 1011 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 POLR3GO15318 223 aaPredicted RBP6.32□□□□□ -1.4
CHD9-210ENST00000564582 PPFIA4O75335 1185 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 TADA3O75528 432 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 IGFBP6P24592 240 aaPredicted RBP6.32□□□□□ -1.4
CHD9-210ENST00000564582 PDE1AP54750 535 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 ST5P78524 1137 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 PKP1Q13835 747 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 SLMAPQ14BN4 828 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 ELF2Q15723 593 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 TRIM61Q5EBN2 209 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 FAM47CQ5HY64 1035 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 GORABQ5T7V8 394 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 GBP6Q6ZN66 633 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 MICALCLQ6ZW33 695 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 OTOP3Q7RTS5 596 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 B3GNT8Q7Z7M8 397 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 MIB1Q86YT6 1006 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 ANKRD18AQ8IVF6 992 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 ZC3H7AQ8IWR0 971 aaKnown RBP6.32□□□□□ -1.4
CHD9-210ENST00000564582 FAM126BQ8IXS8 530 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 LRRC56Q8IYG6 542 aaPredicted RBP6.32□□□□□ -1.4
CHD9-210ENST00000564582 C10orf67Q8IYJ2 551 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 SYNPOQ8N3V7 929 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.32□□□□□ -1.4
CHD9-210ENST00000564582 PIP4K2CQ8TBX8 421 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 TBC1D22AQ8WUA7 517 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 RUBCNQ92622 972 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 GOLGA1Q92805 767 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 MAGEB10Q96LZ2 347 aaPredicted RBP6.32□□□□□ -1.4
CHD9-210ENST00000564582 BCAS3Q9H6U6 928 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 IPPKQ9H8X2 491 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 NCOA5Q9HCD5 579 aaKnown RBP6.32□□□□□ -1.4
CHD9-210ENST00000564582 POLKQ9UBT6 870 aa6.32□□□□□ -1.4
CHD9-210ENST00000564582 TARBP1Q13395 1621 aaKnown RBP6.32□□□□□ -1.4
CHD9-210ENST00000564582 KIAA0232Q92628 1395 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms