RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 NOSTRINQ8IVI9 506 aa22.31■■□□□ 1.16
SHCBP1-203ENST00000564272 KLHL23Q8NBE8 558 aa22.31■■□□□ 1.16
SHCBP1-203ENST00000564272 RNF169Q8NCN4 708 aa22.31■■□□□ 1.16
SHCBP1-203ENST00000564272 NEK9Q8TD19 979 aa22.31■■□□□ 1.16
SHCBP1-203ENST00000564272 P2RX5Q93086 422 aa22.31■■□□□ 1.16
SHCBP1-203ENST00000564272 NECAB3Q96P71 396 aaPredicted RBP22.31■■□□□ 1.16
SHCBP1-203ENST00000564272 LMAN2LQ9H0V9 348 aa22.31■■□□□ 1.16
SHCBP1-203ENST00000564272 DNAJB1P25685 340 aa22.3■■□□□ 1.16
SHCBP1-203ENST00000564272 TTC38Q5R3I4 469 aa22.3■■□□□ 1.16
SHCBP1-203ENST00000564272 SPOUT1Q5T280 376 aaKnown RBP22.3■■□□□ 1.16
SHCBP1-203ENST00000564272 PRPF31Q8WWY3 499 aaKnown RBP22.3■■□□□ 1.16
SHCBP1-203ENST00000564272 PSPC1Q8WXF1 523 aaKnown RBP22.3■■□□□ 1.16
SHCBP1-203ENST00000564272 UHRF1Q96T88 793 aaPredicted RBP22.3■■□□□ 1.16
SHCBP1-203ENST00000564272 PLXNA4Q9HCM2 1894 aa22.29■■□□□ 1.16
SHCBP1-203ENST00000564272 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.29■■□□□ 1.16
SHCBP1-203ENST00000564272 LYPLA2O95372 231 aa22.29■■□□□ 1.16
SHCBP1-203ENST00000564272 OR52Z1P0C646 297 aa22.29■■□□□ 1.16
SHCBP1-203ENST00000564272 ATF7P17544 494 aaPredicted RBP22.29■■□□□ 1.16
SHCBP1-203ENST00000564272 LAMTOR4Q0VGL1 99 aa22.29■■□□□ 1.16
SHCBP1-203ENST00000564272 CAMK1Q14012 370 aa22.29■■□□□ 1.16
SHCBP1-203ENST00000564272 NBR1Q14596 966 aa22.29■■□□□ 1.16
SHCBP1-203ENST00000564272 EXOC8Q8IYI6 725 aa22.29■■□□□ 1.16
SHCBP1-203ENST00000564272 SPPL3Q8TCT6 385 aa22.29■■□□□ 1.16
SHCBP1-203ENST00000564272 TMX3Q96JJ7 454 aa22.29■■□□□ 1.16
SHCBP1-203ENST00000564272 CASD1Q96PB1 797 aa22.29■■□□□ 1.16
SHCBP1-203ENST00000564272 MTRQ99707 1265 aa22.29■■□□□ 1.16
SHCBP1-203ENST00000564272 TMEM117Q9H0C3 514 aa22.29■■□□□ 1.16
SHCBP1-203ENST00000564272 IFT122Q9HBG6 1241 aa22.29■■□□□ 1.16
SHCBP1-203ENST00000564272 XPNPEP1Q9NQW7 623 aa22.29■■□□□ 1.16
SHCBP1-203ENST00000564272 TYW1Q9NV66 732 aaKnown RBP22.29■■□□□ 1.16
SHCBP1-203ENST00000564272 PIN4Q9Y237 131 aaKnown RBP22.29■■□□□ 1.16
SHCBP1-203ENST00000564272 A0A087WWV3 80 aa22.28■■□□□ 1.16
SHCBP1-203ENST00000564272 A0A0U1RQF3 1178 aa22.28■■□□□ 1.16
SHCBP1-203ENST00000564272 SRGAP2CP0DJJ0 459 aa22.28■■□□□ 1.16
SHCBP1-203ENST00000564272 KCNA5P22460 613 aa22.28■■□□□ 1.16
SHCBP1-203ENST00000564272 NAALADL2Q58DX5 795 aa22.28■■□□□ 1.16
SHCBP1-203ENST00000564272 CLLU1OSQ5K130 101 aa22.28■■□□□ 1.16
SHCBP1-203ENST00000564272 CATSPER4Q7RTX7 472 aa22.28■■□□□ 1.16
SHCBP1-203ENST00000564272 ZNF598Q86UK7 904 aaKnown RBP22.28■■□□□ 1.16
SHCBP1-203ENST00000564272 TBC1D32Q96NH3 1257 aa22.28■■□□□ 1.16
SHCBP1-203ENST00000564272 INO80BQ9C086 356 aaPredicted RBP22.28■■□□□ 1.16
SHCBP1-203ENST00000564272 CWH43Q9H720 699 aa22.28■■□□□ 1.16
SHCBP1-203ENST00000564272 DACT1Q9NYF0 836 aa22.28■■□□□ 1.16
SHCBP1-203ENST00000564272 HOXA2O43364 376 aa22.27■■□□□ 1.16
SHCBP1-203ENST00000564272 GAS2O43903 313 aaKnown RBP22.27■■□□□ 1.16
SHCBP1-203ENST00000564272 TECP42680 631 aa22.27■■□□□ 1.16
SHCBP1-203ENST00000564272 ORC2Q13416 577 aaPredicted RBP22.27■■□□□ 1.16
SHCBP1-203ENST00000564272 TWF2Q6IBS0 349 aaKnown RBP22.27■■□□□ 1.16
SHCBP1-203ENST00000564272 LRRC55Q6ZSA7 311 aa22.27■■□□□ 1.16
SHCBP1-203ENST00000564272 FERMT3Q86UX7 667 aa22.27■■□□□ 1.16
SHCBP1-203ENST00000564272 COLGALT1Q8NBJ5 622 aa22.27■■□□□ 1.16
SHCBP1-203ENST00000564272 PIGOQ8TEQ8 1089 aa22.27■■□□□ 1.16
SHCBP1-203ENST00000564272 TCP11Q8WWU5 503 aa22.27■■□□□ 1.16
SHCBP1-203ENST00000564272 CCDC43Q96MW1 224 aaKnown RBP22.27■■□□□ 1.16
SHCBP1-203ENST00000564272 MINDY3Q9H8M7 445 aa22.27■■□□□ 1.16
SHCBP1-203ENST00000564272 CHST12Q9NRB3 414 aa22.27■■□□□ 1.16
SHCBP1-203ENST00000564272 ANKEF1Q9NU02 776 aa22.27■■□□□ 1.16
SHCBP1-203ENST00000564272 PCDHB12Q9Y5F1 795 aa22.27■■□□□ 1.16
SHCBP1-203ENST00000564272 TNFRSF10AO00220 468 aa22.26■■□□□ 1.15
SHCBP1-203ENST00000564272 MED24O75448 989 aa22.26■■□□□ 1.15
SHCBP1-203ENST00000564272 SPATA31C1P0DKV0 1188 aa22.26■■□□□ 1.15
SHCBP1-203ENST00000564272 IRS1P35568 1242 aa22.26■■□□□ 1.15
SHCBP1-203ENST00000564272 RARRES1P49788 294 aa22.26■■□□□ 1.15
SHCBP1-203ENST00000564272 HYAL1Q12794 435 aa22.26■■□□□ 1.15
SHCBP1-203ENST00000564272 EP400NLQ6ZTU2 488 aa22.26■■□□□ 1.15
SHCBP1-203ENST00000564272 ABI1Q8IZP0 508 aa22.26■■□□□ 1.15
SHCBP1-203ENST00000564272 LRRC43Q8N309 656 aa22.26■■□□□ 1.15
SHCBP1-203ENST00000564272 RNF149Q8NC42 400 aa22.26■■□□□ 1.15
SHCBP1-203ENST00000564272 HELQQ8TDG4 1101 aa22.26■■□□□ 1.15
SHCBP1-203ENST00000564272 POF1BQ8WVV4 589 aa22.26■■□□□ 1.15
SHCBP1-203ENST00000564272 AAASQ9NRG9 546 aa22.26■■□□□ 1.15
SHCBP1-203ENST00000564272 NOL7Q9UMY1 257 aaKnown RBP22.26■■□□□ 1.15
SHCBP1-203ENST00000564272 LAG3P18627 525 aa22.25■■□□□ 1.15
SHCBP1-203ENST00000564272 U2AF2P26368 475 aaKnown RBP eCLIP22.25■■□□□ 1.15
SHCBP1-203ENST00000564272 GTF2F1P35269 517 aaKnown RBP eCLIP22.25■■□□□ 1.15
SHCBP1-203ENST00000564272 PHKA2P46019 1235 aa22.25■■□□□ 1.15
SHCBP1-203ENST00000564272 TRAPPC10P48553 1259 aa22.25■■□□□ 1.15
SHCBP1-203ENST00000564272 COL19A1Q14993 1142 aa22.25■■□□□ 1.15
SHCBP1-203ENST00000564272 LEXMQ3ZCV2 418 aa22.25■■□□□ 1.15
SHCBP1-203ENST00000564272 LONRF3Q496Y0 759 aa22.25■■□□□ 1.15
SHCBP1-203ENST00000564272 THNSL1Q8IYQ7 743 aa22.25■■□□□ 1.15
SHCBP1-203ENST00000564272 ASAP3Q8TDY4 903 aa22.25■■□□□ 1.15
SHCBP1-203ENST00000564272 LPPQ93052 612 aa22.25■■□□□ 1.15
SHCBP1-203ENST00000564272 PABPC5Q96DU9 382 aaKnown RBP22.25■■□□□ 1.15
SHCBP1-203ENST00000564272 AGPAT5Q9NUQ2 364 aa22.25■■□□□ 1.15
SHCBP1-203ENST00000564272 CLDND1Q9NY35 253 aa22.25■■□□□ 1.15
SHCBP1-203ENST00000564272 PCDHGC5Q9Y5F6 944 aa22.25■■□□□ 1.15
SHCBP1-203ENST00000564272 H3BQ06 376 aaPredicted RBP22.24■■□□□ 1.15
SHCBP1-203ENST00000564272 USO1O60763 962 aaKnown RBP22.24■■□□□ 1.15
SHCBP1-203ENST00000564272 DGAT1O75907 488 aa22.24■■□□□ 1.15
SHCBP1-203ENST00000564272 EOMESO95936 686 aa22.24■■□□□ 1.15
SHCBP1-203ENST00000564272 PBX3P40426 434 aa22.24■■□□□ 1.15
SHCBP1-203ENST00000564272 TOB1P50616 345 aaPredicted RBP22.24■■□□□ 1.15
SHCBP1-203ENST00000564272 POTEGQ6S5H5 508 aa22.24■■□□□ 1.15
SHCBP1-203ENST00000564272 SRGAP1Q7Z6B7 1085 aa22.24■■□□□ 1.15
SHCBP1-203ENST00000564272 CATSPER3Q86XQ3 398 aa22.24■■□□□ 1.15
SHCBP1-203ENST00000564272 TUFT1Q9NNX1 390 aa22.24■■□□□ 1.15
SHCBP1-203ENST00000564272 ASAP2O43150 1006 aa22.23■■□□□ 1.15
SHCBP1-203ENST00000564272 FGF18O76093 207 aa22.23■■□□□ 1.15
SHCBP1-203ENST00000564272 ADGRD2Q7Z7M1 963 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms