RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 SNX21Q969T3 373 aa31.51■■■□□ 2.63
NME3-203ENST00000563367 DBR1Q9UK59 544 aaKnown RBP31.51■■■□□ 2.63
NME3-203ENST00000563367 VPS37CA5D8V6 355 aaPredicted RBP31.5■■■□□ 2.63
NME3-203ENST00000563367 ZSCAN20P17040 1043 aaPredicted RBP31.5■■■□□ 2.63
NME3-203ENST00000563367 CCT6AP40227 531 aaKnown RBP31.5■■■□□ 2.63
NME3-203ENST00000563367 PAN2Q504Q3 1202 aaKnown RBP31.5■■■□□ 2.63
NME3-203ENST00000563367 HAUS3Q68CZ6 603 aa31.5■■■□□ 2.63
NME3-203ENST00000563367 CMTR2Q8IYT2 770 aaKnown RBP31.5■■■□□ 2.63
NME3-203ENST00000563367 SLC17A8Q8NDX2 589 aa31.5■■■□□ 2.63
NME3-203ENST00000563367 SAMD11Q96NU1 681 aa31.5■■■□□ 2.63
NME3-203ENST00000563367 MINDY3Q9H8M7 445 aa31.5■■■□□ 2.63
NME3-203ENST00000563367 UNC80Q8N2C7 3258 aa31.49■■■□□ 2.63
NME3-203ENST00000563367 PP2D1A8MPX8 630 aa31.49■■■□□ 2.63
NME3-203ENST00000563367 ASAP2O43150 1006 aa31.49■■■□□ 2.63
NME3-203ENST00000563367 PDCP20941 246 aa31.49■■■□□ 2.63
NME3-203ENST00000563367 SFPQP23246 707 aaKnown RBP eCLIP31.49■■■□□ 2.63
NME3-203ENST00000563367 ARL2P36404 184 aa31.49■■■□□ 2.63
NME3-203ENST00000563367 FAM102BQ5T8I3 360 aa31.49■■■□□ 2.63
NME3-203ENST00000563367 DTHD1Q6ZMT9 781 aa31.49■■■□□ 2.63
NME3-203ENST00000563367 MICALL1Q8N3F8 863 aa31.49■■■□□ 2.63
NME3-203ENST00000563367 INO80BQ9C086 356 aaPredicted RBP31.49■■■□□ 2.63
NME3-203ENST00000563367 MRPL42Q9Y6G3 142 aaKnown RBP31.49■■■□□ 2.63
NME3-203ENST00000563367 GTPBP6O43824 516 aaPredicted RBP31.48■■■□□ 2.63
NME3-203ENST00000563367 USO1O60763 962 aaKnown RBP31.48■■■□□ 2.63
NME3-203ENST00000563367 SYT1P21579 422 aa31.48■■■□□ 2.63
NME3-203ENST00000563367 RNF149Q8NC42 400 aa31.48■■■□□ 2.63
NME3-203ENST00000563367 ASAP3Q8TDY4 903 aa31.48■■■□□ 2.63
NME3-203ENST00000563367 CLP1Q92989 425 aaKnown RBP31.48■■■□□ 2.63
NME3-203ENST00000563367 RAB34Q9BZG1 259 aa31.48■■■□□ 2.63
NME3-203ENST00000563367 ELAC1Q9H777 363 aaKnown RBP31.48■■■□□ 2.63
NME3-203ENST00000563367 TMEM161AQ9NX61 479 aa31.48■■■□□ 2.63
NME3-203ENST00000563367 ATG2AQ2TAZ0 1938 aa31.47■■■□□ 2.63
NME3-203ENST00000563367 MUTP22033 750 aa31.47■■■□□ 2.63
NME3-203ENST00000563367 CDC25AP30304 524 aa31.47■■■□□ 2.63
NME3-203ENST00000563367 BRAPQ7Z569 592 aa31.47■■■□□ 2.63
NME3-203ENST00000563367 ECHDC2Q86YB7 292 aa31.47■■■□□ 2.63
NME3-203ENST00000563367 SNX29Q8TEQ0 813 aa31.47■■■□□ 2.63
NME3-203ENST00000563367 KIAA1024Q9UPX6 916 aa31.47■■■□□ 2.63
NME3-203ENST00000563367 FGFR1P11362 822 aa31.46■■■□□ 2.63
NME3-203ENST00000563367 MXD4Q14582 209 aaPredicted RBP31.46■■■□□ 2.63
NME3-203ENST00000563367 MAEAQ7L5Y9 396 aa31.46■■■□□ 2.63
NME3-203ENST00000563367 CATSPER4Q7RTX7 472 aa31.46■■■□□ 2.63
NME3-203ENST00000563367 SRGAP1Q7Z6B7 1085 aa31.46■■■□□ 2.63
NME3-203ENST00000563367 MMTAG2Q9BU76 263 aaKnown RBP31.46■■■□□ 2.63
NME3-203ENST00000563367 GPRC5CQ9NQ84 441 aa31.46■■■□□ 2.63
NME3-203ENST00000563367 PRDM6Q9NQX0 595 aa31.46■■■□□ 2.63
NME3-203ENST00000563367 CHST12Q9NRB3 414 aa31.46■■■□□ 2.63
NME3-203ENST00000563367 RNF19AQ9NV58 838 aa31.46■■■□□ 2.63
NME3-203ENST00000563367 RNF216Q9NWF9 866 aaPredicted RBP31.46■■■□□ 2.63
NME3-203ENST00000563367 GLRA2P23416 452 aa31.45■■■□□ 2.63
NME3-203ENST00000563367 CTNNB1P35222 781 aa31.45■■■□□ 2.63
NME3-203ENST00000563367 BMPR1AP36894 532 aa31.45■■■□□ 2.63
NME3-203ENST00000563367 POLR3FQ9H1D9 316 aaPredicted RBP31.45■■■□□ 2.63
NME3-203ENST00000563367 DDX19AQ9NUU7 478 aaKnown RBP31.45■■■□□ 2.63
NME3-203ENST00000563367 DACT1Q9NYF0 836 aa31.45■■■□□ 2.63
NME3-203ENST00000563367 PIN4Q9Y237 131 aaKnown RBP31.45■■■□□ 2.63
NME3-203ENST00000563367 A0A0U1RQF3 1178 aa31.44■■■□□ 2.62
NME3-203ENST00000563367 H3BNC9 293 aa31.44■■■□□ 2.62
NME3-203ENST00000563367 GPM6BQ13491 265 aa31.44■■■□□ 2.62
NME3-203ENST00000563367 CAPSQ13938 189 aa31.44■■■□□ 2.62
NME3-203ENST00000563367 PADI6Q6TGC4 694 aa31.44■■■□□ 2.62
NME3-203ENST00000563367 STK24Q9Y6E0 443 aa31.44■■■□□ 2.62
NME3-203ENST00000563367 MYO7AQ13402 2215 aa31.44■■■□□ 2.62
NME3-203ENST00000563367 ARHGEF35A5YM69 484 aa31.43■■■□□ 2.62
NME3-203ENST00000563367 VWA3AA6NCI4 1184 aa31.43■■■□□ 2.62
NME3-203ENST00000563367 TBKBP1A7MCY6 615 aa31.43■■■□□ 2.62
NME3-203ENST00000563367 C5orf67F2Z3F1 127 aa31.43■■■□□ 2.62
NME3-203ENST00000563367 ATF7P17544 494 aaPredicted RBP31.43■■■□□ 2.62
NME3-203ENST00000563367 PHKA2P46019 1235 aa31.43■■■□□ 2.62
NME3-203ENST00000563367 PTENP60484 403 aa31.43■■■□□ 2.62
NME3-203ENST00000563367 KRT79Q5XKE5 535 aa31.43■■■□□ 2.62
NME3-203ENST00000563367 ARL6IP4Q66PJ3 421 aaKnown RBP31.43■■■□□ 2.62
NME3-203ENST00000563367 ZNF598Q86UK7 904 aaKnown RBP31.43■■■□□ 2.62
NME3-203ENST00000563367 PHF6Q8IWS0 365 aaKnown RBP eCLIP31.43■■■□□ 2.62
NME3-203ENST00000563367 AGPAT5Q9NUQ2 364 aa31.43■■■□□ 2.62
NME3-203ENST00000563367 LMCD1Q9NZU5 365 aa31.43■■■□□ 2.62
NME3-203ENST00000563367 RESTQ13127 1097 aa31.42■■■□□ 2.62
NME3-203ENST00000563367 RNF169Q8NCN4 708 aa31.42■■■□□ 2.62
NME3-203ENST00000563367 MCPH1Q8NEM0 835 aa31.42■■■□□ 2.62
NME3-203ENST00000563367 BHMT2Q9H2M3 363 aa31.42■■■□□ 2.62
NME3-203ENST00000563367 HCSTQ9UBK5 93 aa31.42■■■□□ 2.62
NME3-203ENST00000563367 MTMR6Q9Y217 621 aa31.42■■■□□ 2.62
NME3-203ENST00000563367 RWDD3Q9Y3V2 267 aa31.42■■■□□ 2.62
NME3-203ENST00000563367 RB1P06400 928 aa31.41■■■□□ 2.62
NME3-203ENST00000563367 CYP11B2P19099 503 aa31.41■■■□□ 2.62
NME3-203ENST00000563367 POU5F1BQ06416 359 aa31.41■■■□□ 2.62
NME3-203ENST00000563367 TFDP1Q14186 410 aa31.41■■■□□ 2.62
NME3-203ENST00000563367 TWF2Q6IBS0 349 aaKnown RBP31.41■■■□□ 2.62
NME3-203ENST00000563367 IFNLR1Q8IU57 520 aaPredicted RBP31.41■■■□□ 2.62
NME3-203ENST00000563367 TRAIPQ9BWF2 469 aa31.41■■■□□ 2.62
NME3-203ENST00000563367 PLXNA4Q9HCM2 1894 aa31.4■■■□□ 2.62
NME3-203ENST00000563367 A0A0C4DFX4 3053 aa31.4■■■□□ 2.62
NME3-203ENST00000563367 HOXA11P31270 313 aaPredicted RBP31.4■■■□□ 2.62
NME3-203ENST00000563367 SF3A1Q15459 793 aaKnown RBP31.4■■■□□ 2.62
NME3-203ENST00000563367 CLLU1OSQ5K130 101 aa31.4■■■□□ 2.62
NME3-203ENST00000563367 HSCBQ8IWL3 235 aa31.4■■■□□ 2.62
NME3-203ENST00000563367 CASD1Q96PB1 797 aa31.4■■■□□ 2.62
NME3-203ENST00000563367 E9PMD0 336 aa31.39■■■□□ 2.62
NME3-203ENST00000563367 EOMESO95936 686 aa31.39■■■□□ 2.62
NME3-203ENST00000563367 FAM173BQ6P4H8 233 aa31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms