RNA–Protein interactions for RNA: ENST00000562411.5

SNAPC5-204, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 3

Gene SNAPC5, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-204ENST00000562411 LINC01553A4QN01 128 aa12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 ZSCAN22P10073 491 aaPredicted RBP12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 FOSL2P15408 326 aa12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 SARSP49591 514 aaKnown RBP12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 HTRA4P83105 476 aaPredicted RBP12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 CDC42EP1Q00587 391 aa12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 GRIN1Q05586 938 aa12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 PKP1Q13835 747 aa12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 TFDP1Q14186 410 aa12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 PAN2Q504Q3 1202 aaKnown RBP12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 FAM102BQ5T8I3 360 aa12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 CATSPER4Q7RTX7 472 aa12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 KCNK18Q7Z418 384 aa12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 RTN4RL1Q86UN2 441 aaPredicted RBP12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 CABP7Q86V35 215 aa12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 MCPH1Q8NEM0 835 aa12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 ARNTL2Q8WYA1 636 aa12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 USP28Q96RU2 1077 aa12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 PLIN2Q99541 437 aa12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 C1orf112Q9NSG2 853 aa12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 LRFN2Q9ULH4 789 aa12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 INSL6Q9Y581 213 aa12.16□□□□□ -0.46
SNAPC5-204ENST00000562411 CHD7Q9P2D1 2997 aa12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 LRRIQ4A6NIV6 560 aa12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 F13A1P00488 732 aa12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 SSBP05455 408 aaKnown RBP eCLIP12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 STAG3L1P0CL83 205 aa12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 XRCC6P12956 609 aaKnown RBP eCLIP12.15□□□□□ -0.466e-6■■■■■ 31.4
SNAPC5-204ENST00000562411 ZSCAN20P17040 1043 aaPredicted RBP12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 GLRA2P23416 452 aa12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 MARCKSP29966 332 aaPredicted RBP12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 GATMP50440 423 aa12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 GRB10Q13322 594 aa12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 DSC3Q14574 896 aa12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 MXD4Q14582 209 aaPredicted RBP12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 PTPAQ15257 358 aa12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 FOXD4L6Q3SYB3 417 aaPredicted RBP12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 FOXD4L3Q6VB84 417 aaPredicted RBP12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 RNF169Q8NCN4 708 aa12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 SP7Q8TDD2 431 aaPredicted RBP12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 GDPD5Q8WTR4 605 aa12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 AK8Q96MA6 479 aa12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 PNMA5Q96PV4 448 aa12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 GAS2L1Q99501 681 aaPredicted RBP12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 INO80BQ9C086 356 aaPredicted RBP12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 MINDY3Q9H8M7 445 aa12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 RC3H2Q9HBD1 1191 aaKnown RBP12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 IFT122Q9HBG6 1241 aa12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 RGS18Q9NS28 235 aa12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 FBXO2Q9UK22 296 aaPredicted RBP12.15□□□□□ -0.46
SNAPC5-204ENST00000562411 EPOPA6NHQ4 379 aa12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 C9IYK1 514 aa12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 ASAP2O43150 1006 aa12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 ERLIN2O94905 339 aa12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 EYA4O95677 639 aa12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 ARL2P36404 184 aa12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 LONP1P36776 959 aaKnown RBP12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 UBA7P41226 1012 aa12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 BTG3Q14201 252 aaPredicted RBP12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 BECN1Q14457 450 aa12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 KARSQ15046 597 aaKnown RBP12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 STK38Q15208 465 aa12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 TMEM119Q4V9L6 283 aa12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 HYIQ5T013 277 aa12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 TWF2Q6IBS0 349 aaKnown RBP12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 SRGAP1Q7Z6B7 1085 aa12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 BSNDQ8WZ55 320 aa12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 CALML4Q96GE6 196 aa12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 TGS1Q96RS0 853 aaKnown RBP12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 C17orf80Q9BSJ5 609 aa12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 RUSC1Q9BVN2 902 aa12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 NT5C3AQ9H0P0 336 aa12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 CSRNP2Q9H175 543 aa12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 AGPAT5Q9NUQ2 364 aa12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 DNM3Q9UQ16 869 aa12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 TRANK1O15050 2925 aa12.14□□□□□ -0.47
SNAPC5-204ENST00000562411 PLXNA4Q9HCM2 1894 aa12.13□□□□□ -0.47
SNAPC5-204ENST00000562411 INO80B-WBP1J3KQ70 363 aa12.13□□□□□ -0.47
SNAPC5-204ENST00000562411 DGKIO75912 1065 aa12.13□□□□□ -0.47
SNAPC5-204ENST00000562411 FGFR1P11362 822 aa12.13□□□□□ -0.47
SNAPC5-204ENST00000562411 CYP11B2P19099 503 aa12.13□□□□□ -0.47
SNAPC5-204ENST00000562411 PLCG1P19174 1290 aa12.13□□□□□ -0.47
SNAPC5-204ENST00000562411 CTNNB1P35222 781 aa12.13□□□□□ -0.47
SNAPC5-204ENST00000562411 NASPP49321 788 aaPredicted RBP12.13□□□□□ -0.47
SNAPC5-204ENST00000562411 MBTD1Q05BQ5 628 aa12.13□□□□□ -0.47
SNAPC5-204ENST00000562411 SPECC1Q5M775 1068 aa12.13□□□□□ -0.47
SNAPC5-204ENST00000562411 SLC24A5Q71RS6 500 aa12.13□□□□□ -0.47
SNAPC5-204ENST00000562411 MICALL1Q8N3F8 863 aa12.13□□□□□ -0.47
SNAPC5-204ENST00000562411 FIBCD1Q8N539 461 aa12.13□□□□□ -0.47
SNAPC5-204ENST00000562411 ZNF396Q96N95 335 aaPredicted RBP12.13□□□□□ -0.47
SNAPC5-204ENST00000562411 CLIC6Q96NY7 704 aa12.13□□□□□ -0.47
SNAPC5-204ENST00000562411 TMEM161AQ9NX61 479 aa12.13□□□□□ -0.47
SNAPC5-204ENST00000562411 DACT1Q9NYF0 836 aa12.13□□□□□ -0.47
SNAPC5-204ENST00000562411 STXBP5LQ9Y2K9 1186 aa12.13□□□□□ -0.47
SNAPC5-204ENST00000562411 PCDHB7Q9Y5E2 793 aa12.13□□□□□ -0.47
SNAPC5-204ENST00000562411 TBKBP1A7MCY6 615 aa12.12□□□□□ -0.47
SNAPC5-204ENST00000562411 RFXAPO00287 272 aa12.12□□□□□ -0.47
SNAPC5-204ENST00000562411 TSPAN1O60635 241 aa12.12□□□□□ -0.47
SNAPC5-204ENST00000562411 HIP1RO75146 1068 aa12.12□□□□□ -0.47
SNAPC5-204ENST00000562411 LIG1P18858 919 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms