RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 SP100P23497 879 aaPredicted RBP14.39□□□□□ -0.11
CLK3-206ENST00000562078 PRCPP42785 496 aa14.39□□□□□ -0.11
CLK3-206ENST00000562078 SEPT2Q15019 361 aa14.39□□□□□ -0.11
CLK3-206ENST00000562078 DLGAP5Q15398 846 aa14.39□□□□□ -0.11
CLK3-206ENST00000562078 AGBL3Q8NEM8 1001 aa14.39□□□□□ -0.11
CLK3-206ENST00000562078 COA7Q96BR5 231 aa14.39□□□□□ -0.11
CLK3-206ENST00000562078 GMLQ99445 158 aa14.39□□□□□ -0.11
CLK3-206ENST00000562078 DISC1Q9NRI5 854 aa14.39□□□□□ -0.11
CLK3-206ENST00000562078 TMEM260Q9NX78 707 aa14.39□□□□□ -0.11
CLK3-206ENST00000562078 SMAPO00193 183 aa14.39□□□□□ -0.11
CLK3-206ENST00000562078 VIMP08670 466 aaKnown RBP14.39□□□□□ -0.11
CLK3-206ENST00000562078 ATP11AP98196 1134 aa14.39□□□□□ -0.11
CLK3-206ENST00000562078 ZNF543Q08ER8 600 aa14.39□□□□□ -0.11
CLK3-206ENST00000562078 MYBPC3Q14896 1274 aa14.39□□□□□ -0.11
CLK3-206ENST00000562078 TNIP1Q15025 636 aa14.39□□□□□ -0.11
CLK3-206ENST00000562078 SHROOM1Q2M3G4 852 aaPredicted RBP14.39□□□□□ -0.11
CLK3-206ENST00000562078 CCDC38Q502W7 563 aa14.39□□□□□ -0.11
CLK3-206ENST00000562078 LMNTD2Q8IXW0 634 aa14.39□□□□□ -0.11
CLK3-206ENST00000562078 TMOD2Q9NZR1 351 aa14.39□□□□□ -0.11
CLK3-206ENST00000562078 DLGAP2Q9P1A6 1054 aa14.39□□□□□ -0.11
CLK3-206ENST00000562078 LRRC42Q9Y546 428 aa14.39□□□□□ -0.11
CLK3-206ENST00000562078 GTPBP6O43824 516 aaPredicted RBP14.38□□□□□ -0.11
CLK3-206ENST00000562078 KIF11P52732 1056 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 LBRQ14739 615 aaKnown RBP14.38□□□□□ -0.11
CLK3-206ENST00000562078 FOXB2Q5VYV0 432 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 ARHGAP27Q6ZUM4 889 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 NEK8Q86SG6 692 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 LONP2Q86WA8 852 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 TBCKQ8TEA7 893 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 BICD1Q96G01 975 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 PLIN2Q99541 437 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 ISCUQ9H1K1 167 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 ARHGAP20Q9P2F6 1191 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 PACSIN2Q9UNF0 486 aaPredicted RBP14.38□□□□□ -0.11
CLK3-206ENST00000562078 ESYT2A0FGR8 921 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 DDTLA6NHG4 134 aaPredicted RBP14.38□□□□□ -0.11
CLK3-206ENST00000562078 SPDYE2BA6NHP3 402 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 LAD1O00515 517 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 SART1O43290 800 aaKnown RBP14.38□□□□□ -0.11
CLK3-206ENST00000562078 OR52Z1P0C646 297 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 SPDYE6P0CI01 402 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 UBA7P41226 1012 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 LACTBP83111 547 aaPredicted RBP14.38□□□□□ -0.11
CLK3-206ENST00000562078 TMEM62Q0P6H9 643 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 SGSM1Q2NKQ1 1148 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 TTBK2Q6IQ55 1244 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 MAIP1Q8WWC4 291 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 KIFAP3Q92845 792 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 LRRC45Q96CN5 670 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 IDI2Q9BXS1 227 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 FAM198AQ9UFP1 575 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 PNMA3Q9UL41 463 aa14.38□□□□□ -0.11
CLK3-206ENST00000562078 SRCAPQ6ZRS2 3230 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 CLRN2A0PK11 232 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 H7C1D1 291 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 FTCDO95954 541 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 GNAZP19086 355 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 SLC16A2P36021 539 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 NAALADL2Q58DX5 795 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 CACNA2D4Q7Z3S7 1137 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 ADGRF4Q8IZF3 695 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 ATXN2LQ8WWM7 1075 aaKnown RBP14.37□□□□□ -0.11
CLK3-206ENST00000562078 SELENOSQ9BQE4 189 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 CNOT10Q9H9A5 744 aaKnown RBP14.37□□□□□ -0.11
CLK3-206ENST00000562078 ARHGEF3Q9NR81 526 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.37□□□□□ -0.11
CLK3-206ENST00000562078 GJA3Q9Y6H8 435 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 GOLGA6L10A0A0M3HER8 536 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 hCG_1984214I3L0E3 225 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 CREB3O43889 395 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 RAD21O60216 631 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 ATP6V1G1O75348 118 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 EIF4A3P38919 411 aaKnown RBP14.37□□□□□ -0.11
CLK3-206ENST00000562078 DNM2P50570 870 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 ADCY7P51828 1080 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 COPS2P61201 443 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 KCTD1Q719H9 257 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 SDCCAG8Q86SQ7 713 aaPredicted RBP14.37□□□□□ -0.11
CLK3-206ENST00000562078 ZNF713Q8N859 430 aaPredicted RBP14.37□□□□□ -0.11
CLK3-206ENST00000562078 MOV10L1Q9BXT6 1211 aaKnown RBP14.37□□□□□ -0.11
CLK3-206ENST00000562078 JMJD4Q9H9V9 463 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 EXOC1Q9NV70 894 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 TSKSQ9UJT2 592 aa14.37□□□□□ -0.11
CLK3-206ENST00000562078 ABLIM1O14639 778 aa14.36□□□□□ -0.11
CLK3-206ENST00000562078 HIP1RO75146 1068 aa14.36□□□□□ -0.11
CLK3-206ENST00000562078 RPN1P04843 607 aaKnown RBP14.36□□□□□ -0.11
CLK3-206ENST00000562078 MYBP10242 640 aa14.36□□□□□ -0.11
CLK3-206ENST00000562078 ATP6V1C1P21283 382 aa14.36□□□□□ -0.11
CLK3-206ENST00000562078 PRELPP51888 382 aa14.36□□□□□ -0.11
CLK3-206ENST00000562078 GALNTL6Q49A17 601 aa14.36□□□□□ -0.11
CLK3-206ENST00000562078 ACBD5Q5T8D3 534 aaPredicted RBP14.36□□□□□ -0.11
CLK3-206ENST00000562078 ZNF658Q5TYW1 1059 aaPredicted RBP14.36□□□□□ -0.11
CLK3-206ENST00000562078 SH3BP5LQ7L8J4 393 aa14.36□□□□□ -0.11
CLK3-206ENST00000562078 CENPTQ96BT3 561 aa14.36□□□□□ -0.11
CLK3-206ENST00000562078 FGD4Q96M96 766 aa14.36□□□□□ -0.11
CLK3-206ENST00000562078 PRMT1Q99873 361 aaKnown RBP14.36□□□□□ -0.11
CLK3-206ENST00000562078 DHX36Q9H2U1 1008 aaKnown RBP14.36□□□□□ -0.11
CLK3-206ENST00000562078 DICER1Q9UPY3 1922 aaKnown RBP14.36□□□□□ -0.11
CLK3-206ENST00000562078 TCP10L2B9ZVM9 353 aa14.36□□□□□ -0.11
CLK3-206ENST00000562078 AKR1B10O60218 316 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms