RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 NFASCO94856 1347 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 A0A0G2JMZ2 1700 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 ATP8B3O60423 1300 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 ERLIN1O75477 346 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 STAM2O75886 525 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 KRT13P13646 458 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 STAT1P42224 750 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 NAP1L1P55209 391 aaKnown RBP10.7□□□□□ -0.7
SMG1-205ENST00000561947 PRKG1Q13976 671 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 LONRF2Q1L5Z9 754 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 KIAA0753Q2KHM9 967 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 FAM102BQ5T8I3 360 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 INTS8Q75QN2 995 aaKnown RBP10.7□□□□□ -0.7
SMG1-205ENST00000561947 ANO5Q75V66 913 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 ZNF572Q7Z3I7 529 aaPredicted RBP10.7□□□□□ -0.7
SMG1-205ENST00000561947 CREG2Q8IUH2 290 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 IWS1Q96ST2 819 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 PACSIN1Q9BY11 444 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 INTS2Q9H0H0 1204 aaKnown RBP10.7□□□□□ -0.7
SMG1-205ENST00000561947 PCIF1Q9H4Z3 704 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 TSKSQ9UJT2 592 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 NENFQ9UMX5 172 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 DAAM1Q9Y4D1 1078 aa10.7□□□□□ -0.7
SMG1-205ENST00000561947 BTNL10A8MVZ5 291 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 TISP43B9A030 160 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 SLC16A4O15374 487 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 DKC1O60832 514 aaKnown RBP eCLIP10.69□□□□□ -0.74e-9■■■■■ 30.3
SMG1-205ENST00000561947 SASH3O75995 380 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 PLA2G4AP47712 749 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 VSNL1P62760 191 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 WDR93Q6P2C0 686 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 NFRKBQ6P4R8 1299 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 OTUD6AQ7L8S5 288 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 TRMT1LQ7Z2T5 733 aaKnown RBP10.69□□□□□ -0.7
SMG1-205ENST00000561947 RDH13Q8NBN7 331 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 COG1Q8WTW3 980 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 ATP6V0A1Q93050 837 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 CBWD1Q9BRT8 395 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 TLR10Q9BXR5 811 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 STK33Q9BYT3 514 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 JPH1Q9HDC5 661 aaPredicted RBP10.69□□□□□ -0.7
SMG1-205ENST00000561947 GABBR1Q9UBS5 961 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 NAGPAQ9UK23 515 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 MYH9P35579 1960 aaKnown RBP10.69□□□□□ -0.7
SMG1-205ENST00000561947 F8VZ95 297 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 MAPK13O15264 365 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 NCK2O43639 380 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 STBD1O95210 358 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 PSAPP07602 524 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 SOX5P35711 763 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 VGLL4Q14135 290 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 GNPTABQ3T906 1256 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 BEND6Q5SZJ8 279 aaPredicted RBP10.69□□□□□ -0.7
SMG1-205ENST00000561947 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.69□□□□□ -0.7
SMG1-205ENST00000561947 VPS36Q86VN1 386 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 HVCN1Q96D96 273 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 FUT8Q9BYC5 575 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 HSPBP1Q9NZL4 362 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 DNAJC12Q9UKB3 198 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 PCDHGC5Q9Y5F6 944 aa10.69□□□□□ -0.7
SMG1-205ENST00000561947 ZNF862O60290 1169 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 N4BP1O75113 896 aaKnown RBP10.68□□□□□ -0.7
SMG1-205ENST00000561947 PALMO75781 387 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 GFPT2O94808 682 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 VAMP7P51809 220 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 ITIH3Q06033 890 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 XXYLT1Q8NBI6 393 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 CHST13Q8NET6 341 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 ABCB6Q9NP58 842 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 SLC9A2Q9UBY0 812 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 APEX2Q9UBZ4 518 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 EXOC7Q9UPT5 735 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 EMSYQ7Z589 1322 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 TARSL2A2RTX5 802 aaKnown RBP10.68□□□□□ -0.7
SMG1-205ENST00000561947 SPATA31C2B4DYI2 1134 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 EVI5O60447 810 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 RFX1P22670 979 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 SMTNP53814 917 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 C2orf54Q08AI8 447 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 DMP1Q13316 513 aaPredicted RBP10.68□□□□□ -0.7
SMG1-205ENST00000561947 DRAP1Q14919 205 aaPredicted RBP10.68□□□□□ -0.7
SMG1-205ENST00000561947 ALKBH5Q6P6C2 394 aaKnown RBP10.68□□□□□ -0.7
SMG1-205ENST00000561947 FMNL3Q8IVF7 1028 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 TMEM161BQ8NDZ6 487 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 LMO3Q8TAP4 145 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 KIFAP3Q92845 792 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 CEP170P1Q96L14 293 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 GPR88Q9GZN0 384 aa10.68□□□□□ -0.7
SMG1-205ENST00000561947 CCDC169A6NNP5 214 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 P4HA2O15460 535 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 MCM3P25205 808 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 NPTX2P47972 431 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 DLG4P78352 724 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 TREML2Q5T2D2 321 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 SWSAP1Q6NVH7 229 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 MAP4K3Q8IVH8 894 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 SPIRE2Q8WWL2 714 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 C17orf75Q9HAS0 396 aa10.67□□□□□ -0.7
SMG1-205ENST00000561947 RNF216Q9NWF9 866 aaPredicted RBP10.67□□□□□ -0.7
SMG1-205ENST00000561947 TBX20Q9UMR3 447 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms