RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 RHOBTB2Q9BYZ6 727 aa8.36□□□□□ -1.07
SMG1-204ENST00000561940 CCM2LQ9NUG4 571 aaPredicted RBP8.36□□□□□ -1.07
SMG1-204ENST00000561940 IP6K2Q9UHH9 426 aa8.36□□□□□ -1.07
SMG1-204ENST00000561940 LUC7L2Q9Y383 392 aaKnown RBP8.36□□□□□ -1.07
SMG1-204ENST00000561940 PCDHGA9Q9Y5G4 932 aaKnown RBP8.36□□□□□ -1.07
SMG1-204ENST00000561940 PCDHGA8Q9Y5G5 932 aa8.36□□□□□ -1.07
SMG1-204ENST00000561940 PCDHGA7Q9Y5G6 932 aa8.36□□□□□ -1.07
SMG1-204ENST00000561940 PCDHGA6Q9Y5G7 932 aa8.36□□□□□ -1.07
SMG1-204ENST00000561940 PCDHGA3Q9Y5H0 932 aa8.36□□□□□ -1.07
SMG1-204ENST00000561940 PCDHGA2Q9Y5H1 932 aa8.36□□□□□ -1.07
SMG1-204ENST00000561940 ELL2O00472 640 aaPredicted RBP8.35□□□□□ -1.07
SMG1-204ENST00000561940 ABLIM3O94929 683 aa8.35□□□□□ -1.07
SMG1-204ENST00000561940 HSP90AB2PQ58FF8 381 aa8.35□□□□□ -1.07
SMG1-204ENST00000561940 ZBTB41Q5SVQ8 909 aa8.35□□□□□ -1.07
SMG1-204ENST00000561940 ERICH6BQ5W0A0 696 aa8.35□□□□□ -1.07
SMG1-204ENST00000561940 LARP4Q71RC2 724 aaKnown RBP eCLIP8.35□□□□□ -1.07
SMG1-204ENST00000561940 CXXC5Q7LFL8 322 aaKnown RBP8.35□□□□□ -1.07
SMG1-204ENST00000561940 PLEKHH3Q7Z736 793 aa8.35□□□□□ -1.07
SMG1-204ENST00000561940 CXorf67Q86X51 503 aaPredicted RBP8.35□□□□□ -1.07
SMG1-204ENST00000561940 TUBGCP5Q96RT8 1024 aa8.35□□□□□ -1.07
SMG1-204ENST00000561940 ANO3Q9BYT9 981 aa8.35□□□□□ -1.07
SMG1-204ENST00000561940 PPP4R1LQ9P1A2 415 aa8.35□□□□□ -1.07
SMG1-204ENST00000561940 ZNF180Q9UJW8 692 aa8.35□□□□□ -1.07
SMG1-204ENST00000561940 NOB1Q9ULX3 412 aaKnown RBP8.35□□□□□ -1.07
SMG1-204ENST00000561940 SPEF1Q9Y4P9 236 aa8.35□□□□□ -1.07
SMG1-204ENST00000561940 PPP2R3BQ9Y5P8 575 aa8.35□□□□□ -1.07
SMG1-204ENST00000561940 UBA6A0AVT1 1052 aaPredicted RBP8.34□□□□□ -1.07
SMG1-204ENST00000561940 NPEPPSL1A6NEC2 478 aa8.34□□□□□ -1.07
SMG1-204ENST00000561940 PRRG2O14669 202 aa8.34□□□□□ -1.07
SMG1-204ENST00000561940 PRPF3O43395 683 aaKnown RBP8.34□□□□□ -1.07
SMG1-204ENST00000561940 CUTAO60888 179 aa8.34□□□□□ -1.07
SMG1-204ENST00000561940 HMGCRP04035 888 aa8.34□□□□□ -1.07
SMG1-204ENST00000561940 APEX1P27695 318 aaKnown RBP8.34□□□□□ -1.07
SMG1-204ENST00000561940 BUD31P41223 144 aaPredicted RBP8.34□□□□□ -1.07
SMG1-204ENST00000561940 STAT5BP51692 787 aa8.34□□□□□ -1.07
SMG1-204ENST00000561940 MANFP55145 182 aaKnown RBP8.34□□□□□ -1.07
SMG1-204ENST00000561940 CT83Q5H943 113 aa8.34□□□□□ -1.07
SMG1-204ENST00000561940 PRAMEF9Q5VWM5 478 aa8.34□□□□□ -1.07
SMG1-204ENST00000561940 GRAMD4Q6IC98 578 aa8.34□□□□□ -1.07
SMG1-204ENST00000561940 REXO1L1PQ8IX06 675 aa8.34□□□□□ -1.07
SMG1-204ENST00000561940 IFNL2Q8IZJ0 200 aa8.34□□□□□ -1.07
SMG1-204ENST00000561940 C7orf31Q8N865 590 aa8.34□□□□□ -1.07
SMG1-204ENST00000561940 SLC13A1Q9BZW2 595 aa8.34□□□□□ -1.07
SMG1-204ENST00000561940 KIAA1683Q9H0B3 1180 aa8.34□□□□□ -1.07
SMG1-204ENST00000561940 PRDM12Q9H4Q4 367 aa8.34□□□□□ -1.07
SMG1-204ENST00000561940 A0A0G2JNJ9 132 aa8.33□□□□□ -1.08
SMG1-204ENST00000561940 APOL3O95236 402 aa8.33□□□□□ -1.08
SMG1-204ENST00000561940 PRLP01236 227 aa8.33□□□□□ -1.08
SMG1-204ENST00000561940 ITGB3P05106 788 aa8.33□□□□□ -1.08
SMG1-204ENST00000561940 RBP3P10745 1247 aa8.33□□□□□ -1.08
SMG1-204ENST00000561940 MYBPC3Q14896 1274 aa8.33□□□□□ -1.08
SMG1-204ENST00000561940 SURF1Q15526 300 aa8.33□□□□□ -1.08
SMG1-204ENST00000561940 GLB1LQ6UWU2 654 aa8.33□□□□□ -1.08
SMG1-204ENST00000561940 LRRC37BQ96QE4 947 aa8.33□□□□□ -1.08
SMG1-204ENST00000561940 RBM15Q96T37 977 aaKnown RBP eCLIP8.33□□□□□ -1.08
SMG1-204ENST00000561940 MYL10Q9BUA6 226 aa8.33□□□□□ -1.08
SMG1-204ENST00000561940 MKS1Q9NXB0 559 aa8.33□□□□□ -1.08
SMG1-204ENST00000561940 Q9UFV3 132 aa8.33□□□□□ -1.08
SMG1-204ENST00000561940 EDARQ9UNE0 448 aa8.33□□□□□ -1.08
SMG1-204ENST00000561940 K7ESM1 405 aa8.32□□□□□ -1.08
SMG1-204ENST00000561940 CNOT4O95628 575 aaKnown RBP8.32□□□□□ -1.08
SMG1-204ENST00000561940 ZSCAN20P17040 1043 aaPredicted RBP8.32□□□□□ -1.08
SMG1-204ENST00000561940 CCND1P24385 295 aa8.32□□□□□ -1.08
SMG1-204ENST00000561940 ETV4P43268 484 aa8.32□□□□□ -1.08
SMG1-204ENST00000561940 SRSF2Q01130 221 aaKnown RBP8.32□□□□□ -1.08
SMG1-204ENST00000561940 ROM1Q03395 351 aa8.32□□□□□ -1.08
SMG1-204ENST00000561940 TTC38Q5R3I4 469 aa8.32□□□□□ -1.08
SMG1-204ENST00000561940 SLFN12LQ6IEE8 588 aa8.32□□□□□ -1.08
SMG1-204ENST00000561940 CCDC62Q6P9F0 684 aa8.32□□□□□ -1.08
SMG1-204ENST00000561940 UNQ6494/PRO21346Q6UXR6 183 aa8.32□□□□□ -1.08
SMG1-204ENST00000561940 PNMA8AQ86V59 439 aaPredicted RBP8.32□□□□□ -1.08
SMG1-204ENST00000561940 PHYKPLQ8IUZ5 450 aa8.32□□□□□ -1.08
SMG1-204ENST00000561940 CHPFQ8IZ52 775 aa8.32□□□□□ -1.08
SMG1-204ENST00000561940 JPH3Q8WXH2 748 aaPredicted RBP8.32□□□□□ -1.08
SMG1-204ENST00000561940 E2F7Q96AV8 911 aa8.32□□□□□ -1.08
SMG1-204ENST00000561940 LOXL4Q96JB6 756 aa8.32□□□□□ -1.08
SMG1-204ENST00000561940 MAML3Q96JK9 1138 aa8.32□□□□□ -1.08
SMG1-204ENST00000561940 ORAI2Q96SN7 254 aa8.32□□□□□ -1.08
SMG1-204ENST00000561940 FOXB1Q99853 325 aa8.32□□□□□ -1.08
SMG1-204ENST00000561940 QRSL1Q9H0R6 528 aaKnown RBP8.32□□□□□ -1.08
SMG1-204ENST00000561940 FBXO10Q9UK96 956 aa8.32□□□□□ -1.08
SMG1-204ENST00000561940 NCANO14594 1321 aa8.31□□□□□ -1.08
SMG1-204ENST00000561940 E2F8A0AVK6 867 aa8.31□□□□□ -1.08
SMG1-204ENST00000561940 TRIM75PA6NK02 468 aa8.31□□□□□ -1.08
SMG1-204ENST00000561940 XPOTO43592 962 aaKnown RBP8.31□□□□□ -1.08
SMG1-204ENST00000561940 SNUPNO95149 360 aaKnown RBP8.31□□□□□ -1.08
SMG1-204ENST00000561940 ADCY1Q08828 1119 aa8.31□□□□□ -1.08
SMG1-204ENST00000561940 EIF4HQ15056 248 aaKnown RBP8.31□□□□□ -1.08
SMG1-204ENST00000561940 PCOLCEQ15113 449 aa8.31□□□□□ -1.08
SMG1-204ENST00000561940 CLUL1Q15846 466 aa8.31□□□□□ -1.08
SMG1-204ENST00000561940 TBR1Q16650 682 aa8.31□□□□□ -1.08
SMG1-204ENST00000561940 RNF151Q2KHN1 245 aa8.31□□□□□ -1.08
SMG1-204ENST00000561940 CCDC181Q5TID7 509 aa8.31□□□□□ -1.08
SMG1-204ENST00000561940 C14orf80Q86SX3 495 aa8.31□□□□□ -1.08
SMG1-204ENST00000561940 RTKN2Q8IZC4 609 aa8.31□□□□□ -1.08
SMG1-204ENST00000561940 EAF2Q96CJ1 260 aaPredicted RBP8.31□□□□□ -1.08
SMG1-204ENST00000561940 GNRHR2Q96P88 292 aa8.31□□□□□ -1.08
SMG1-204ENST00000561940 USP36Q9P275 1121 aaKnown RBP8.31□□□□□ -1.08
SMG1-204ENST00000561940 FAM184BQ9ULE4 1060 aa8.31□□□□□ -1.08
SMG1-204ENST00000561940 PRSS38A1L453 326 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms