RNA–Protein interactions for RNA: ENST00000561728.1

AC010542.3-202, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC010542.3, Length 701 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010542.3-202ENST00000561728 TUBE1Q9UJT0 475 aa11.05□□□□□ -0.64
AC010542.3-202ENST00000561728 IGSF9BQ9UPX0 1349 aa11.05□□□□□ -0.64
AC010542.3-202ENST00000561728 RELNP78509 3460 aa11.04□□□□□ -0.64
AC010542.3-202ENST00000561728 K7ESF4 209 aa11.04□□□□□ -0.64
AC010542.3-202ENST00000561728 MGEA5O60502 916 aa11.04□□□□□ -0.64
AC010542.3-202ENST00000561728 PAPSS2O95340 614 aaPredicted RBP11.04□□□□□ -0.64
AC010542.3-202ENST00000561728 CAVIN2O95810 425 aa11.04□□□□□ -0.64
AC010542.3-202ENST00000561728 CSRP3P50461 194 aa11.04□□□□□ -0.64
AC010542.3-202ENST00000561728 CREB5Q02930 508 aa11.04□□□□□ -0.64
AC010542.3-202ENST00000561728 TTF1Q15361 905 aaPredicted RBP11.04□□□□□ -0.64
AC010542.3-202ENST00000561728 TMEM266Q2M3C6 531 aa11.04□□□□□ -0.64
AC010542.3-202ENST00000561728 FAM43BQ6ZT52 329 aaPredicted RBP11.04□□□□□ -0.64
AC010542.3-202ENST00000561728 TRIM50Q86XT4 487 aa11.04□□□□□ -0.64
AC010542.3-202ENST00000561728 SCUBE3Q8IX30 993 aa11.04□□□□□ -0.64
AC010542.3-202ENST00000561728 MRPL50Q8N5N7 158 aaKnown RBP11.04□□□□□ -0.64
AC010542.3-202ENST00000561728 CASD1Q96PB1 797 aa11.04□□□□□ -0.64
AC010542.3-202ENST00000561728 FAM49AQ9H0Q0 323 aaPredicted RBP11.04□□□□□ -0.64
AC010542.3-202ENST00000561728 ADAMTS10Q9H324 1103 aa11.04□□□□□ -0.64
AC010542.3-202ENST00000561728 ZNF287Q9HBT7 754 aa11.04□□□□□ -0.64
AC010542.3-202ENST00000561728 RGS18Q9NS28 235 aa11.04□□□□□ -0.64
AC010542.3-202ENST00000561728 MTMR7Q9Y216 660 aa11.04□□□□□ -0.64
AC010542.3-202ENST00000561728 FBN2P35556 2912 aa11.04□□□□□ -0.64
AC010542.3-202ENST00000561728 C9IYK1 514 aa11.03□□□□□ -0.64
AC010542.3-202ENST00000561728 RFPL2O75678 378 aa11.03□□□□□ -0.64
AC010542.3-202ENST00000561728 EIF2AK2P19525 551 aaKnown RBP11.03□□□□□ -0.64
AC010542.3-202ENST00000561728 UBA1P22314 1058 aaKnown RBP11.03□□□□□ -0.64
AC010542.3-202ENST00000561728 FSHRP23945 695 aa11.03□□□□□ -0.64
AC010542.3-202ENST00000561728 TIE1P35590 1138 aa11.03□□□□□ -0.64
AC010542.3-202ENST00000561728 SLC16A2P36021 539 aa11.03□□□□□ -0.64
AC010542.3-202ENST00000561728 TMEM62Q0P6H9 643 aa11.03□□□□□ -0.64
AC010542.3-202ENST00000561728 PPFIA1Q13136 1202 aa11.03□□□□□ -0.64
AC010542.3-202ENST00000561728 OS9Q13438 667 aaPredicted RBP11.03□□□□□ -0.64
AC010542.3-202ENST00000561728 UTP14CQ5TAP6 766 aaKnown RBP11.03□□□□□ -0.64
AC010542.3-202ENST00000561728 SYDE2Q5VT97 1194 aa11.03□□□□□ -0.64
AC010542.3-202ENST00000561728 DDX53Q86TM3 631 aaKnown RBP11.03□□□□□ -0.64
AC010542.3-202ENST00000561728 ARID3AQ99856 593 aa11.03□□□□□ -0.64
AC010542.3-202ENST00000561728 KXD1Q9BQD3 176 aa11.03□□□□□ -0.64
AC010542.3-202ENST00000561728 MFRPQ9BY79 579 aa11.03□□□□□ -0.64
AC010542.3-202ENST00000561728 ELAC1Q9H777 363 aaKnown RBP11.03□□□□□ -0.64
AC010542.3-202ENST00000561728 DBNLQ9UJU6 430 aaKnown RBP11.03□□□□□ -0.64
AC010542.3-202ENST00000561728 CDH7Q9ULB5 785 aa11.03□□□□□ -0.64
AC010542.3-202ENST00000561728 PAXBP1Q9Y5B6 917 aa11.03□□□□□ -0.64
AC010542.3-202ENST00000561728 SLC4A4Q9Y6R1 1079 aa11.03□□□□□ -0.64
AC010542.3-202ENST00000561728 C2CD2LO14523 706 aa11.02□□□□□ -0.65
AC010542.3-202ENST00000561728 CDX4O14627 284 aaPredicted RBP11.02□□□□□ -0.65
AC010542.3-202ENST00000561728 KHNYNO15037 678 aaKnown RBP11.02□□□□□ -0.65
AC010542.3-202ENST00000561728 CNPP09543 421 aaKnown RBP11.02□□□□□ -0.65
AC010542.3-202ENST00000561728 TSPY3P0CV98 308 aa11.02□□□□□ -0.65
AC010542.3-202ENST00000561728 TSPY8P0CW00 308 aa11.02□□□□□ -0.65
AC010542.3-202ENST00000561728 MYBP10242 640 aa11.02□□□□□ -0.65
AC010542.3-202ENST00000561728 GP1BBP13224 206 aa11.02□□□□□ -0.65
AC010542.3-202ENST00000561728 BCAR1P56945 870 aa11.02□□□□□ -0.65
AC010542.3-202ENST00000561728 MTX1Q13505 466 aa11.02□□□□□ -0.65
AC010542.3-202ENST00000561728 CCNI2Q6ZMN8 369 aaPredicted RBP11.02□□□□□ -0.65
AC010542.3-202ENST00000561728 ZNF687Q8N1G0 1237 aa11.02□□□□□ -0.65
AC010542.3-202ENST00000561728 ZNF710Q8N1W2 664 aa11.02□□□□□ -0.65
AC010542.3-202ENST00000561728 RGS22Q8NE09 1264 aa11.02□□□□□ -0.65
AC010542.3-202ENST00000561728 SYTL5Q8TDW5 730 aaPredicted RBP11.02□□□□□ -0.65
AC010542.3-202ENST00000561728 DCBLD2Q96PD2 775 aa11.02□□□□□ -0.65
AC010542.3-202ENST00000561728 TLR7Q9NYK1 1049 aaKnown RBP11.02□□□□□ -0.65
AC010542.3-202ENST00000561728 DKK4Q9UBT3 224 aa11.02□□□□□ -0.65
AC010542.3-202ENST00000561728 NXF1Q9UBU9 619 aaKnown RBP11.02□□□□□ -0.65
AC010542.3-202ENST00000561728 TCRBV5S4A2TA0A5A2 114 aa11.01□□□□□ -0.65
AC010542.3-202ENST00000561728 SLC28A2O43868 658 aa11.01□□□□□ -0.65
AC010542.3-202ENST00000561728 PRDM1O75626 825 aa11.01□□□□□ -0.65
AC010542.3-202ENST00000561728 NR3C2P08235 984 aa11.01□□□□□ -0.65
AC010542.3-202ENST00000561728 GRIK4Q16099 956 aa11.01□□□□□ -0.65
AC010542.3-202ENST00000561728 ODR4Q5SWX8 454 aa11.01□□□□□ -0.65
AC010542.3-202ENST00000561728 FAM3CQ92520 227 aa11.01□□□□□ -0.65
AC010542.3-202ENST00000561728 CLUAP1Q96AJ1 413 aa11.01□□□□□ -0.65
AC010542.3-202ENST00000561728 ZNF707Q96C28 371 aaPredicted RBP11.01□□□□□ -0.65
AC010542.3-202ENST00000561728 MS4A3Q96HJ5 214 aa11.01□□□□□ -0.65
AC010542.3-202ENST00000561728 CELF4Q9BZC1 486 aaKnown RBP11.01□□□□□ -0.65
AC010542.3-202ENST00000561728 PRORYQ9H606 182 aa11.01□□□□□ -0.65
AC010542.3-202ENST00000561728 ZBED9Q6R2W3 1325 aa11.01□□□□□ -0.65
AC010542.3-202ENST00000561728 NBPF19A0A087WUL8 3843 aa11□□□□□ -0.65
AC010542.3-202ENST00000561728 MBLAC1A4D2B0 266 aaPredicted RBP11□□□□□ -0.65
AC010542.3-202ENST00000561728 CARNS1A5YM72 827 aa11□□□□□ -0.65
AC010542.3-202ENST00000561728 MINDY4BA8MYZ0 360 aa11□□□□□ -0.65
AC010542.3-202ENST00000561728 B8ZZF3 427 aa11□□□□□ -0.65
AC010542.3-202ENST00000561728 GLUD1P00367 558 aa11□□□□□ -0.65
AC010542.3-202ENST00000561728 SSBP05455 408 aaKnown RBP eCLIP11□□□□□ -0.65
AC010542.3-202ENST00000561728 TGFB3P10600 412 aa11□□□□□ -0.65
AC010542.3-202ENST00000561728 HOXA6P31267 233 aa11□□□□□ -0.65
AC010542.3-202ENST00000561728 SP2Q02086 613 aa11□□□□□ -0.65
AC010542.3-202ENST00000561728 GAS6Q14393 721 aa11□□□□□ -0.65
AC010542.3-202ENST00000561728 ELF2Q15723 593 aa11□□□□□ -0.65
AC010542.3-202ENST00000561728 USH1GQ495M9 461 aa11□□□□□ -0.65
AC010542.3-202ENST00000561728 PPP4R3BQ5MIZ7 849 aa11□□□□□ -0.65
AC010542.3-202ENST00000561728 TTBK2Q6IQ55 1244 aa11□□□□□ -0.65
AC010542.3-202ENST00000561728 WDR63Q8IWG1 891 aa11□□□□□ -0.65
AC010542.3-202ENST00000561728 EFCAB3Q8N7B9 438 aa11□□□□□ -0.65
AC010542.3-202ENST00000561728 DNASE1L2Q92874 299 aa11□□□□□ -0.65
AC010542.3-202ENST00000561728 ZC3H10Q96K80 434 aaKnown RBP11□□□□□ -0.65
AC010542.3-202ENST00000561728 FCRL3Q96P31 734 aaPredicted RBP11□□□□□ -0.65
AC010542.3-202ENST00000561728 COL20A1Q9P218 1284 aa11□□□□□ -0.65
AC010542.3-202ENST00000561728 ANKMY1Q9P2S6 941 aa11□□□□□ -0.65
AC010542.3-202ENST00000561728 STX8Q9UNK0 236 aa11□□□□□ -0.65
AC010542.3-202ENST00000561728 WDR19Q8NEZ3 1342 aa11□□□□□ -0.65
AC010542.3-202ENST00000561728 SALL3Q9BXA9 1300 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms