RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 MGEA5O60502 916 aa11.25□□□□□ -0.61
HERC1-212ENST00000561348 STAG3L1P0CL83 205 aa11.25□□□□□ -0.61
HERC1-212ENST00000561348 DARSP14868 501 aaKnown RBP11.25□□□□□ -0.61
HERC1-212ENST00000561348 SFPQP23246 707 aaKnown RBP eCLIP11.25□□□□□ -0.61
HERC1-212ENST00000561348 UBA7P41226 1012 aa11.25□□□□□ -0.61
HERC1-212ENST00000561348 ATP2C1P98194 919 aaPredicted RBP11.25□□□□□ -0.61
HERC1-212ENST00000561348 CDC42EP1Q00587 391 aa11.25□□□□□ -0.61
HERC1-212ENST00000561348 RAD51AP2Q09MP3 1159 aa11.25□□□□□ -0.61
HERC1-212ENST00000561348 RESTQ13127 1097 aa11.25□□□□□ -0.61
HERC1-212ENST00000561348 TFDP1Q14186 410 aa11.25□□□□□ -0.61
HERC1-212ENST00000561348 PDIA5Q14554 519 aa11.25□□□□□ -0.61
HERC1-212ENST00000561348 SPECC1Q5M775 1068 aa11.25□□□□□ -0.61
HERC1-212ENST00000561348 TWF2Q6IBS0 349 aaKnown RBP11.25□□□□□ -0.61
HERC1-212ENST00000561348 PADI6Q6TGC4 694 aa11.25□□□□□ -0.61
HERC1-212ENST00000561348 CABP7Q86V35 215 aa11.25□□□□□ -0.61
HERC1-212ENST00000561348 FIBCD1Q8N539 461 aa11.25□□□□□ -0.61
HERC1-212ENST00000561348 LINC01465Q8N7H1 131 aa11.25□□□□□ -0.61
HERC1-212ENST00000561348 LINC01599Q8WXQ3 324 aa11.25□□□□□ -0.61
HERC1-212ENST00000561348 CEP89Q96ST8 783 aa11.25□□□□□ -0.61
HERC1-212ENST00000561348 INO80BQ9C086 356 aaPredicted RBP11.25□□□□□ -0.61
HERC1-212ENST00000561348 DNM3Q9UQ16 869 aa11.25□□□□□ -0.61
HERC1-212ENST00000561348 SQORQ9Y6N5 450 aa11.25□□□□□ -0.61
HERC1-212ENST00000561348 ARID2Q68CP9 1835 aa11.24□□□□□ -0.61
HERC1-212ENST00000561348 IGKV6-21A0A0C4DH24 114 aa11.24□□□□□ -0.61
HERC1-212ENST00000561348 ERLIN2O94905 339 aa11.24□□□□□ -0.61
HERC1-212ENST00000561348 LYPLA2O95372 231 aa11.24□□□□□ -0.61
HERC1-212ENST00000561348 SLC34A2O95436 690 aa11.24□□□□□ -0.61
HERC1-212ENST00000561348 PRPHP41219 470 aa11.24□□□□□ -0.61
HERC1-212ENST00000561348 PHKA2P46019 1235 aa11.24□□□□□ -0.61
HERC1-212ENST00000561348 GRIN1Q05586 938 aa11.24□□□□□ -0.61
HERC1-212ENST00000561348 STK38Q15208 465 aa11.24□□□□□ -0.61
HERC1-212ENST00000561348 SKIV2LQ15477 1246 aaKnown RBP11.24□□□□□ -0.61
HERC1-212ENST00000561348 ZNF410Q86VK4 478 aa11.24□□□□□ -0.61
HERC1-212ENST00000561348 IGSF22Q8N9C0 903 aa11.24□□□□□ -0.61
HERC1-212ENST00000561348 ASAP3Q8TDY4 903 aa11.24□□□□□ -0.61
HERC1-212ENST00000561348 CALML4Q96GE6 196 aa11.24□□□□□ -0.61
HERC1-212ENST00000561348 C17orf80Q9BSJ5 609 aa11.24□□□□□ -0.61
HERC1-212ENST00000561348 TSPYL2Q9H2G4 693 aaPredicted RBP11.24□□□□□ -0.61
HERC1-212ENST00000561348 ZSCAN16Q9H4T2 348 aaPredicted RBP11.24□□□□□ -0.61
HERC1-212ENST00000561348 XPNPEP1Q9NQW7 623 aa11.24□□□□□ -0.61
HERC1-212ENST00000561348 PPME1Q9Y570 386 aa11.24□□□□□ -0.61
HERC1-212ENST00000561348 STK24Q9Y6E0 443 aa11.24□□□□□ -0.61
HERC1-212ENST00000561348 TMEM265A0A087WTH1 108 aa11.23□□□□□ -0.61
HERC1-212ENST00000561348 LINC01553A4QN01 128 aa11.23□□□□□ -0.61
HERC1-212ENST00000561348 TBKBP1A7MCY6 615 aa11.23□□□□□ -0.61
HERC1-212ENST00000561348 ASAP2O43150 1006 aa11.23□□□□□ -0.61
HERC1-212ENST00000561348 GAS2O43903 313 aaKnown RBP11.23□□□□□ -0.61
HERC1-212ENST00000561348 BMP15O95972 392 aa11.23□□□□□ -0.61
HERC1-212ENST00000561348 FGFR1P11362 822 aa11.23□□□□□ -0.61
HERC1-212ENST00000561348 XRCC6P12956 609 aaKnown RBP eCLIP11.23□□□□□ -0.616e-6■■■■■ 27.6
HERC1-212ENST00000561348 NCLP19338 710 aaKnown RBP11.23□□□□□ -0.61
HERC1-212ENST00000561348 CTNNB1P35222 781 aa11.23□□□□□ -0.61
HERC1-212ENST00000561348 SARSP49591 514 aaKnown RBP11.23□□□□□ -0.61
HERC1-212ENST00000561348 NCBP1Q09161 790 aaKnown RBP11.23□□□□□ -0.61
HERC1-212ENST00000561348 BECN1Q14457 450 aa11.23□□□□□ -0.61
HERC1-212ENST00000561348 MXD4Q14582 209 aaPredicted RBP11.23□□□□□ -0.61
HERC1-212ENST00000561348 SLC24A5Q71RS6 500 aa11.23□□□□□ -0.61
HERC1-212ENST00000561348 NPAS4Q8IUM7 802 aa11.23□□□□□ -0.61
HERC1-212ENST00000561348 ABI1Q8IZP0 508 aa11.23□□□□□ -0.61
HERC1-212ENST00000561348 ZNF710Q8N1W2 664 aa11.23□□□□□ -0.61
HERC1-212ENST00000561348 GDPD5Q8WTR4 605 aa11.23□□□□□ -0.61
HERC1-212ENST00000561348 CLIC6Q96NY7 704 aa11.23□□□□□ -0.61
HERC1-212ENST00000561348 TGS1Q96RS0 853 aaKnown RBP11.23□□□□□ -0.61
HERC1-212ENST00000561348 PANK2Q9BZ23 570 aa11.23□□□□□ -0.61
HERC1-212ENST00000561348 RGS18Q9NS28 235 aa11.23□□□□□ -0.61
HERC1-212ENST00000561348 C1orf112Q9NSG2 853 aa11.23□□□□□ -0.61
HERC1-212ENST00000561348 DBR1Q9UK59 544 aaKnown RBP11.23□□□□□ -0.61
HERC1-212ENST00000561348 EPOPA6NHQ4 379 aa11.22□□□□□ -0.61
HERC1-212ENST00000561348 CCDC169A6NNP5 214 aa11.22□□□□□ -0.61
HERC1-212ENST00000561348 GTPBP6O43824 516 aaPredicted RBP11.22□□□□□ -0.61
HERC1-212ENST00000561348 KRT18P05783 430 aaKnown RBP11.22□□□□□ -0.61
HERC1-212ENST00000561348 ZSCAN22P10073 491 aaPredicted RBP11.22□□□□□ -0.61
HERC1-212ENST00000561348 GLRA2P23416 452 aa11.22□□□□□ -0.61
HERC1-212ENST00000561348 PKP1Q13835 747 aa11.22□□□□□ -0.61
HERC1-212ENST00000561348 CAPSQ13938 189 aa11.22□□□□□ -0.61
HERC1-212ENST00000561348 KARSQ15046 597 aaKnown RBP11.22□□□□□ -0.61
HERC1-212ENST00000561348 ARL6IP4Q66PJ3 421 aaKnown RBP11.22□□□□□ -0.61
HERC1-212ENST00000561348 CDR2LQ86X02 465 aaPredicted RBP11.22□□□□□ -0.61
HERC1-212ENST00000561348 ZBTB8OSQ8IWT0 167 aa11.22□□□□□ -0.61
HERC1-212ENST00000561348 MCPH1Q8NEM0 835 aa11.22□□□□□ -0.61
HERC1-212ENST00000561348 FBXO22Q8NEZ5 403 aa11.22□□□□□ -0.61
HERC1-212ENST00000561348 MAFAQ8NHW3 353 aaPredicted RBP11.22□□□□□ -0.61
HERC1-212ENST00000561348 DEPTORQ8TB45 409 aa11.22□□□□□ -0.61
HERC1-212ENST00000561348 LPPQ93052 612 aa11.22□□□□□ -0.61
HERC1-212ENST00000561348 CPB2Q96IY4 423 aa11.22□□□□□ -0.61
HERC1-212ENST00000561348 IFT74Q96LB3 600 aa11.22□□□□□ -0.61
HERC1-212ENST00000561348 ZNF396Q96N95 335 aaPredicted RBP11.22□□□□□ -0.61
HERC1-212ENST00000561348 USP28Q96RU2 1077 aa11.22□□□□□ -0.61
HERC1-212ENST00000561348 APOL6Q9BWW8 343 aa11.22□□□□□ -0.61
HERC1-212ENST00000561348 CSRNP2Q9H175 543 aa11.22□□□□□ -0.61
HERC1-212ENST00000561348 ZHX3Q9H4I2 956 aa11.22□□□□□ -0.61
HERC1-212ENST00000561348 MINDY3Q9H8M7 445 aa11.22□□□□□ -0.61
HERC1-212ENST00000561348 IFT122Q9HBG6 1241 aa11.22□□□□□ -0.61
HERC1-212ENST00000561348 DACT1Q9NYF0 836 aa11.22□□□□□ -0.61
HERC1-212ENST00000561348 INPP5FQ9Y2H2 1132 aa11.22□□□□□ -0.61
HERC1-212ENST00000561348 STXBP5LQ9Y2K9 1186 aa11.22□□□□□ -0.61
HERC1-212ENST00000561348 ADGRA3Q8IWK6 1321 aa11.21□□□□□ -0.61
HERC1-212ENST00000561348 SFI1A8K8P3 1242 aa11.21□□□□□ -0.61
HERC1-212ENST00000561348 DGKIO75912 1065 aa11.21□□□□□ -0.61
HERC1-212ENST00000561348 EYA4O95677 639 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms