RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 KLHL5Q96PQ7 755 aa10.92□□□□□ -0.66
HERC1-210ENST00000560897 ZSCAN10Q96SZ4 725 aaPredicted RBP10.92□□□□□ -0.66
HERC1-210ENST00000560897 LTB4R2Q9NPC1 389 aa10.92□□□□□ -0.66
HERC1-210ENST00000560897 HELLSQ9NRZ9 838 aa10.92□□□□□ -0.66
HERC1-210ENST00000560897 ZBTB40Q9NUA8 1239 aa10.92□□□□□ -0.66
HERC1-210ENST00000560897 RNF19AQ9NV58 838 aa10.92□□□□□ -0.66
HERC1-210ENST00000560897 LHX6Q9UPM6 363 aa10.92□□□□□ -0.66
HERC1-210ENST00000560897 LAMA4Q16363 1823 aa10.92□□□□□ -0.66
HERC1-210ENST00000560897 MYH15Q9Y2K3 1946 aa10.92□□□□□ -0.66
HERC1-210ENST00000560897 TMEM8BA6NDV4 472 aa10.91□□□□□ -0.66
HERC1-210ENST00000560897 C1QTNF9BB2RNN3 333 aa10.91□□□□□ -0.66
HERC1-210ENST00000560897 ATP9AO75110 1047 aa10.91□□□□□ -0.66
HERC1-210ENST00000560897 ADH1AP07327 375 aa10.91□□□□□ -0.66
HERC1-210ENST00000560897 C1QTNF9P0C862 333 aa10.91□□□□□ -0.66
HERC1-210ENST00000560897 KLRC1P26715 233 aa10.91□□□□□ -0.66
HERC1-210ENST00000560897 STAT5BP51692 787 aa10.91□□□□□ -0.66
HERC1-210ENST00000560897 RNASELQ05823 741 aaKnown RBP10.91□□□□□ -0.66
HERC1-210ENST00000560897 MTMR1Q13613 665 aa10.91□□□□□ -0.66
HERC1-210ENST00000560897 HTR4Q13639 388 aa10.91□□□□□ -0.66
HERC1-210ENST00000560897 DSC3Q14574 896 aa10.91□□□□□ -0.66
HERC1-210ENST00000560897 IFIT1BQ5T764 474 aaKnown RBP10.91□□□□□ -0.66
HERC1-210ENST00000560897 PLPPR4Q7Z2D5 763 aa10.91□□□□□ -0.66
HERC1-210ENST00000560897 TBC1D10CQ8IV04 446 aa10.91□□□□□ -0.66
HERC1-210ENST00000560897 STAG2Q8N3U4 1231 aa10.91□□□□□ -0.66
HERC1-210ENST00000560897 NELL1Q92832 810 aa10.91□□□□□ -0.66
HERC1-210ENST00000560897 MTMR8Q96EF0 704 aa10.91□□□□□ -0.66
HERC1-210ENST00000560897 UBAC1Q9BSL1 405 aa10.91□□□□□ -0.66
HERC1-210ENST00000560897 CDHR5Q9HBB8 845 aa10.91□□□□□ -0.66
HERC1-210ENST00000560897 PRMT8Q9NR22 394 aaPredicted RBP10.91□□□□□ -0.66
HERC1-210ENST00000560897 MRPL17Q9NRX2 175 aaKnown RBP10.91□□□□□ -0.66
HERC1-210ENST00000560897 CEP295Q9C0D2 2601 aa10.91□□□□□ -0.66
HERC1-210ENST00000560897 BAZ2BQ9UIF8 2168 aaKnown RBP10.9□□□□□ -0.66
HERC1-210ENST00000560897 ANHXE9PGG2 379 aa10.9□□□□□ -0.66
HERC1-210ENST00000560897 GDF9O60383 454 aa10.9□□□□□ -0.66
HERC1-210ENST00000560897 GLUD1P00367 558 aa10.9□□□□□ -0.66
HERC1-210ENST00000560897 URODP06132 367 aa10.9□□□□□ -0.66
HERC1-210ENST00000560897 CNPP09543 421 aaKnown RBP10.9□□□□□ -0.66
HERC1-210ENST00000560897 SLC26A2P50443 739 aa10.9□□□□□ -0.66
HERC1-210ENST00000560897 GPC5P78333 572 aa10.9□□□□□ -0.66
HERC1-210ENST00000560897 SLC44A4Q53GD3 710 aa10.9□□□□□ -0.66
HERC1-210ENST00000560897 LRSAM1Q6UWE0 723 aa10.9□□□□□ -0.66
HERC1-210ENST00000560897 TMEM173Q86WV6 379 aaPredicted RBP10.9□□□□□ -0.66
HERC1-210ENST00000560897 KIAA0319LQ8IZA0 1049 aa10.9□□□□□ -0.66
HERC1-210ENST00000560897 ENAHQ8N8S7 591 aaPredicted RBP10.9□□□□□ -0.66
HERC1-210ENST00000560897 C12orf50Q8NA57 414 aaPredicted RBP10.9□□□□□ -0.66
HERC1-210ENST00000560897 PIGSQ96S52 555 aa10.9□□□□□ -0.66
HERC1-210ENST00000560897 NELL2Q99435 816 aa10.9□□□□□ -0.66
HERC1-210ENST00000560897 SDF4Q9BRK5 362 aa10.9□□□□□ -0.66
HERC1-210ENST00000560897 DDX23Q9BUQ8 820 aaKnown RBP10.9□□□□□ -0.66
HERC1-210ENST00000560897 RHOBTB2Q9BYZ6 727 aa10.9□□□□□ -0.66
HERC1-210ENST00000560897 DACT1Q9NYF0 836 aa10.9□□□□□ -0.66
HERC1-210ENST00000560897 SLC9A2Q9UBY0 812 aa10.9□□□□□ -0.66
HERC1-210ENST00000560897 SSX2IPQ9Y2D8 614 aa10.9□□□□□ -0.66
HERC1-210ENST00000560897 MRPS17Q9Y2R5 130 aaKnown RBP10.9□□□□□ -0.66
HERC1-210ENST00000560897 ZFP37Q9Y6Q3 630 aaPredicted RBP10.9□□□□□ -0.66
HERC1-210ENST00000560897 PNMA6FA0A0J9YX94 578 aa10.89□□□□□ -0.67
HERC1-210ENST00000560897 ZNF213O14771 459 aa10.89□□□□□ -0.67
HERC1-210ENST00000560897 HBP1O60381 514 aa10.89□□□□□ -0.67
HERC1-210ENST00000560897 RPS9P46781 194 aaKnown RBP10.89□□□□□ -0.67
HERC1-210ENST00000560897 SIM2Q14190 667 aaPredicted RBP10.89□□□□□ -0.67
HERC1-210ENST00000560897 MCMDC2Q4G0Z9 681 aa10.89□□□□□ -0.67
HERC1-210ENST00000560897 FAM160B1Q5W0V3 765 aa10.89□□□□□ -0.67
HERC1-210ENST00000560897 MTSS1LQ765P7 747 aa10.89□□□□□ -0.67
HERC1-210ENST00000560897 METTL13Q8N6R0 699 aa10.89□□□□□ -0.67
HERC1-210ENST00000560897 KDF1Q8NAX2 398 aaPredicted RBP10.89□□□□□ -0.67
HERC1-210ENST00000560897 ST13P5Q8NFI4 369 aaPredicted RBP10.89□□□□□ -0.67
HERC1-210ENST00000560897 SCLT1Q96NL6 688 aa10.89□□□□□ -0.67
HERC1-210ENST00000560897 PCYT2Q99447 389 aa10.89□□□□□ -0.67
HERC1-210ENST00000560897 MTF2Q9Y483 593 aaPredicted RBP10.89□□□□□ -0.67
HERC1-210ENST00000560897 COL1A2P08123 1366 aa10.89□□□□□ -0.67
HERC1-210ENST00000560897 A0A0U1RQF3 1178 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 B4E1Z4 1266 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 C2CD2LO14523 706 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 BACH1O14867 736 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 MAFGO15525 162 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 RFPL2O75678 378 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 VTNP04004 478 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 GALTP07902 379 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 MYBP10242 640 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 LIMK1P53667 647 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 AK2P54819 239 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 WTAPQ15007 396 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 ZNF484Q5JVG2 852 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 USP17L6PQ6QN14 398 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 GLB1LQ6UWU2 654 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 TPRG1Q6ZUI0 275 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 PI4K2BQ8TCG2 481 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 MAP7D2Q96T17 732 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 GBP3Q9H0R5 595 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 FAM217BQ9NTX9 383 aaPredicted RBP10.88□□□□□ -0.67
HERC1-210ENST00000560897 MAD2L2Q9UI95 211 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 AKT3Q9Y243 479 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 INPP5FQ9Y2H2 1132 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 FRYQ5TBA9 3013 aa10.88□□□□□ -0.67
HERC1-210ENST00000560897 SETXQ7Z333 2677 aaKnown RBP10.88□□□□□ -0.67
HERC1-210ENST00000560897 ITGB5P18084 799 aa10.87□□□□□ -0.67
HERC1-210ENST00000560897 CD72P21854 359 aa10.87□□□□□ -0.67
HERC1-210ENST00000560897 FSHRP23945 695 aa10.87□□□□□ -0.67
HERC1-210ENST00000560897 TARSP26639 723 aaKnown RBP10.87□□□□□ -0.67
HERC1-210ENST00000560897 RBM25P49756 843 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms