RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 LRIT3Q3SXY7 679 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 RILPL1Q5EBL4 403 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 DTHD1Q6ZMT9 781 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 C16orf59Q7L2K0 433 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 MYOCDQ8IZQ8 938 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 TET1Q8NFU7 2136 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 SLC7A3Q8WY07 619 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 HERVK_113Q902F9 699 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 CDK5RAP3Q96JB5 506 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 ZNF668Q96K58 619 aaPredicted RBP8.94□□□□□ -0.98
LRRC28-219ENST00000560483 CTAGE1Q96RT6 745 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 EIF2AK1Q9BQI3 630 aaKnown RBP8.94□□□□□ -0.98
LRRC28-219ENST00000560483 IFIH1Q9BYX4 1025 aaKnown RBP8.94□□□□□ -0.98
LRRC28-219ENST00000560483 TMEM60Q9H2L4 133 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 PRO3102Q9H379 93 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 ZSWIM4Q9H7M6 989 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 RGL1Q9NZL6 768 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 CXXC1Q9P0U4 656 aaPredicted RBP8.94□□□□□ -0.98
LRRC28-219ENST00000560483 PCDHB6Q9Y5E3 794 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 TRPV2Q9Y5S1 764 aa8.94□□□□□ -0.98
LRRC28-219ENST00000560483 MYO9BQ13459 2157 aa8.93□□□□□ -0.98
LRRC28-219ENST00000560483 SMIM35A0A1B0GVV1 85 aa8.93□□□□□ -0.98
LRRC28-219ENST00000560483 MBLAC1A4D2B0 266 aaPredicted RBP8.93□□□□□ -0.98
LRRC28-219ENST00000560483 ZNF862O60290 1169 aa8.93□□□□□ -0.98
LRRC28-219ENST00000560483 EFCAB14O75071 495 aa8.93□□□□□ -0.98
LRRC28-219ENST00000560483 BAIAP3O94812 1187 aa8.93□□□□□ -0.98
LRRC28-219ENST00000560483 AMHP03971 560 aa8.93□□□□□ -0.98
LRRC28-219ENST00000560483 ATP4AP20648 1035 aa8.93□□□□□ -0.98
LRRC28-219ENST00000560483 U2AF2P26368 475 aaKnown RBP eCLIP8.93□□□□□ -0.98
LRRC28-219ENST00000560483 YWHABP31946 246 aaKnown RBP8.93□□□□□ -0.98
LRRC28-219ENST00000560483 CCT6AP40227 531 aaKnown RBP8.93□□□□□ -0.98
LRRC28-219ENST00000560483 RABGGTBP53611 331 aa8.93□□□□□ -0.98
LRRC28-219ENST00000560483 ORC2Q13416 577 aaPredicted RBP8.93□□□□□ -0.98
LRRC28-219ENST00000560483 CUL4AQ13619 759 aa8.93□□□□□ -0.98
LRRC28-219ENST00000560483 BECN1Q14457 450 aa8.93□□□□□ -0.98
LRRC28-219ENST00000560483 KIZQ2M2Z5 673 aa8.93□□□□□ -0.98
LRRC28-219ENST00000560483 TRIM71Q2Q1W2 868 aaKnown RBP8.93□□□□□ -0.98
LRRC28-219ENST00000560483 FOXD4L6Q3SYB3 417 aaPredicted RBP8.93□□□□□ -0.98
LRRC28-219ENST00000560483 MARCH8Q5T0T0 291 aa8.93□□□□□ -0.98
LRRC28-219ENST00000560483 HAUS3Q68CZ6 603 aa8.93□□□□□ -0.98
LRRC28-219ENST00000560483 FOXD4L3Q6VB84 417 aaPredicted RBP8.93□□□□□ -0.98
LRRC28-219ENST00000560483 NME8Q8N427 588 aa8.93□□□□□ -0.98
LRRC28-219ENST00000560483 DBF4BQ8NFT6 615 aa8.93□□□□□ -0.98
LRRC28-219ENST00000560483 NEK9Q8TD19 979 aa8.93□□□□□ -0.98
LRRC28-219ENST00000560483 SNX21Q969T3 373 aa8.93□□□□□ -0.98
LRRC28-219ENST00000560483 INTS4Q96HW7 963 aaKnown RBP8.93□□□□□ -0.98
LRRC28-219ENST00000560483 OSMRQ99650 979 aa8.93□□□□□ -0.98
LRRC28-219ENST00000560483 JPH2Q9BR39 696 aaPredicted RBP8.93□□□□□ -0.98
LRRC28-219ENST00000560483 CELF4Q9BZC1 486 aaKnown RBP8.93□□□□□ -0.98
LRRC28-219ENST00000560483 LRWD1Q9UFC0 647 aa8.93□□□□□ -0.98
LRRC28-219ENST00000560483 LAMA3Q16787 3333 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 A0A087WWV3 80 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 ABHD14A-ACY1A0A1B0GW23 586 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 DENND3A2RUS2 1198 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 VWA3AA6NCI4 1184 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 SIAH2O43255 324 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 STX6O43752 255 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 RPS6KA5O75582 802 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 C22orf31O95567 290 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 CHRNA1P02708 482 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 SYT1P21579 422 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 HOXC8P31273 242 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 CD52P31358 61 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 NPEPPSP55786 919 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 NLRP11P59045 1033 aaKnown RBP8.92□□□□□ -0.98
LRRC28-219ENST00000560483 ADAM17P78536 824 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 PLCB2Q00722 1185 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 RBL2Q08999 1139 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 RAB30Q15771 203 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 ODR4Q5SWX8 454 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 KRT79Q5XKE5 535 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 TSHZ1Q6ZSZ6 1077 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 Q7L0L9 218 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 MAEAQ7L5Y9 396 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 BRAPQ7Z569 592 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 RHPN2Q8IUC4 686 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 EXOC8Q8IYI6 725 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 DEFB123Q8N688 67 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 SNX29Q8TEQ0 813 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 PIGOQ8TEQ8 1089 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 APBB2Q92870 758 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 TIFAQ96CG3 184 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 NLRP4Q96MN2 994 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 SLC9A7Q96T83 725 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 SLC28A3Q9HAS3 691 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 CYP26B1Q9NR63 512 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 SUCLA2Q9P2R7 463 aaPredicted RBP8.92□□□□□ -0.98
LRRC28-219ENST00000560483 NXF1Q9UBU9 619 aaKnown RBP8.92□□□□□ -0.98
LRRC28-219ENST00000560483 LRFN2Q9ULH4 789 aa8.92□□□□□ -0.98
LRRC28-219ENST00000560483 ARHGEF35A5YM69 484 aa8.91□□□□□ -0.98
LRRC28-219ENST00000560483 RBAK-RBAKDNI3L0D1 243 aa8.91□□□□□ -0.98
LRRC28-219ENST00000560483 LAD1O00515 517 aa8.91□□□□□ -0.98
LRRC28-219ENST00000560483 USO1O60763 962 aaKnown RBP8.91□□□□□ -0.98
LRRC28-219ENST00000560483 SSBP05455 408 aaKnown RBP eCLIP8.91□□□□□ -0.98
LRRC28-219ENST00000560483 SRGAP2CP0DJJ0 459 aa8.91□□□□□ -0.98
LRRC28-219ENST00000560483 ZSCAN20P17040 1043 aaPredicted RBP8.91□□□□□ -0.98
LRRC28-219ENST00000560483 TOB1P50616 345 aaPredicted RBP8.91□□□□□ -0.98
LRRC28-219ENST00000560483 WDR5P61964 334 aaKnown RBP8.91□□□□□ -0.98
LRRC28-219ENST00000560483 SMAD3P84022 425 aaKnown RBP8.91□□□□□ -0.98
LRRC28-219ENST00000560483 LPIN1Q14693 890 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms