RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 PPM1AP35813 382 aa7.61□□□□□ -1.19
HERC1-208ENST00000560462 RAP1GAPP47736 663 aa7.61□□□□□ -1.19
HERC1-208ENST00000560462 CXCL12P48061 93 aa7.61□□□□□ -1.19
HERC1-208ENST00000560462 CLDN10P78369 228 aa7.61□□□□□ -1.19
HERC1-208ENST00000560462 PFKPQ01813 784 aa7.61□□□□□ -1.19
HERC1-208ENST00000560462 C4orf17Q53FE4 359 aa7.61□□□□□ -1.19
HERC1-208ENST00000560462 HEATR6Q6AI08 1181 aaKnown RBP7.61□□□□□ -1.19
HERC1-208ENST00000560462 TPRG1Q6ZUI0 275 aa7.61□□□□□ -1.19
HERC1-208ENST00000560462 TAS1R3Q7RTX0 852 aa7.61□□□□□ -1.19
HERC1-208ENST00000560462 RTN4RL1Q86UN2 441 aaPredicted RBP7.61□□□□□ -1.19
HERC1-208ENST00000560462 ST13P5Q8NFI4 369 aaPredicted RBP7.61□□□□□ -1.19
HERC1-208ENST00000560462 PPTC7Q8NI37 304 aa7.61□□□□□ -1.19
HERC1-208ENST00000560462 SLC22A17Q8WUG5 538 aa7.61□□□□□ -1.19
HERC1-208ENST00000560462 MARVELD3Q96A59 401 aa7.61□□□□□ -1.19
HERC1-208ENST00000560462 FTHL17Q9BXU8 183 aa7.61□□□□□ -1.19
HERC1-208ENST00000560462 WDR6Q9NNW5 1121 aaKnown RBP7.61□□□□□ -1.19
HERC1-208ENST00000560462 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.61□□□□□ -1.19
HERC1-208ENST00000560462 NXF1Q9UBU9 619 aaKnown RBP7.61□□□□□ -1.19
HERC1-208ENST00000560462 ATMQ13315 3056 aa7.6□□□□□ -1.19
HERC1-208ENST00000560462 PTPDC1A2A3K4 754 aa7.6□□□□□ -1.19
HERC1-208ENST00000560462 B4DLN1 442 aa7.6□□□□□ -1.19
HERC1-208ENST00000560462 DXOO77932 396 aaKnown RBP7.6□□□□□ -1.19
HERC1-208ENST00000560462 DKK1O94907 266 aa7.6□□□□□ -1.19
HERC1-208ENST00000560462 SMIM10L2AP0DMW4 78 aa7.6□□□□□ -1.19
HERC1-208ENST00000560462 SMIM10L2BP0DMW5 78 aa7.6□□□□□ -1.19
HERC1-208ENST00000560462 CYP2D6P10635 497 aa7.6□□□□□ -1.19
HERC1-208ENST00000560462 IBSPP21815 317 aaPredicted RBP7.6□□□□□ -1.19
HERC1-208ENST00000560462 MRPL12P52815 198 aaKnown RBP7.6□□□□□ -1.19
HERC1-208ENST00000560462 ATP8B2P98198 1209 aa7.6□□□□□ -1.19
HERC1-208ENST00000560462 TFCP2Q12800 502 aa7.6□□□□□ -1.19
HERC1-208ENST00000560462 TSHZ1Q6ZSZ6 1077 aa7.6□□□□□ -1.19
HERC1-208ENST00000560462 RAB44Q7Z6P3 723 aaPredicted RBP7.6□□□□□ -1.19
HERC1-208ENST00000560462 RPAP2Q8IXW5 612 aaPredicted RBP7.6□□□□□ -1.19
HERC1-208ENST00000560462 PIP4K2CQ8TBX8 421 aa7.6□□□□□ -1.19
HERC1-208ENST00000560462 TMEM9BQ9NQ34 198 aa7.6□□□□□ -1.19
HERC1-208ENST00000560462 ANKMY1Q9P2S6 941 aa7.6□□□□□ -1.19
HERC1-208ENST00000560462 LCTP09848 1927 aa7.6□□□□□ -1.19
HERC1-208ENST00000560462 LNP1A1A4G5 178 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 ANKRD33BA6NCL7 494 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 B8ZZF3 427 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 SLC28A2O43868 658 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 PPFIA4O75335 1185 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 GNAT1P11488 350 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 MMP16P51512 607 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 STAT2P52630 851 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 SEC13P55735 322 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 SATB1Q01826 763 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 FBXO47Q5MNV8 452 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 KCNT2Q6UVM3 1135 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 CACNA2D4Q7Z3S7 1137 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 PPFIBP1Q86W92 1011 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 EMID1Q96A84 441 aaPredicted RBP7.59□□□□□ -1.19
HERC1-208ENST00000560462 ZNF558Q96NG5 402 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 ARHGAP9Q9BRR9 750 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 RPP25Q9BUL9 199 aaKnown RBP7.59□□□□□ -1.19
HERC1-208ENST00000560462 RNPEPQ9H4A4 650 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 CWH43Q9H720 699 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 SPG21Q9NZD8 308 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 DDX41Q9UJV9 622 aaKnown RBP7.59□□□□□ -1.19
HERC1-208ENST00000560462 CCPG1Q9ULG6 757 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 ISY1Q9ULR0 285 aaKnown RBP7.59□□□□□ -1.19
HERC1-208ENST00000560462 PA2G4Q9UQ80 394 aaKnown RBP7.59□□□□□ -1.19
HERC1-208ENST00000560462 PCDHB7Q9Y5E2 793 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 PCDHB3Q9Y5E6 796 aa7.59□□□□□ -1.19
HERC1-208ENST00000560462 URB1O60287 2271 aaKnown RBP7.58□□□□□ -1.2
HERC1-208ENST00000560462 TMEM232C9JQI7 657 aa7.58□□□□□ -1.2
HERC1-208ENST00000560462 CALML3P27482 149 aa7.58□□□□□ -1.2
HERC1-208ENST00000560462 CD52P31358 61 aa7.58□□□□□ -1.2
HERC1-208ENST00000560462 PBX3P40426 434 aa7.58□□□□□ -1.2
HERC1-208ENST00000560462 CDK8P49336 464 aa7.58□□□□□ -1.2
HERC1-208ENST00000560462 IKQ13123 557 aaPredicted RBP7.58□□□□□ -1.2
HERC1-208ENST00000560462 LAMC2Q13753 1193 aa7.58□□□□□ -1.2
HERC1-208ENST00000560462 WTAPQ15007 396 aa7.58□□□□□ -1.2
HERC1-208ENST00000560462 WDR43Q15061 677 aaKnown RBP eCLIP7.58□□□□□ -1.2
HERC1-208ENST00000560462 OCLNQ16625 522 aa7.58□□□□□ -1.2
HERC1-208ENST00000560462 ZNF423Q2M1K9 1284 aa7.58□□□□□ -1.2
HERC1-208ENST00000560462 UAP1L1Q3KQV9 507 aa7.58□□□□□ -1.2
HERC1-208ENST00000560462 KRTAP21-3Q3LHN1 58 aa7.58□□□□□ -1.2
HERC1-208ENST00000560462 SLC30A10Q6XR72 485 aa7.58□□□□□ -1.2
HERC1-208ENST00000560462 CCNI2Q6ZMN8 369 aaPredicted RBP7.58□□□□□ -1.2
HERC1-208ENST00000560462 SEPT14Q6ZU15 432 aa7.58□□□□□ -1.2
HERC1-208ENST00000560462 KBTBD6Q86V97 674 aa7.58□□□□□ -1.2
HERC1-208ENST00000560462 ZNF687Q8N1G0 1237 aa7.58□□□□□ -1.2
HERC1-208ENST00000560462 GIPC2Q8TF65 315 aa7.58□□□□□ -1.2
HERC1-208ENST00000560462 FGF14Q92915 247 aa7.58□□□□□ -1.2
HERC1-208ENST00000560462 CRNKL1Q9BZJ0 848 aaKnown RBP7.58□□□□□ -1.2
HERC1-208ENST00000560462 USP44Q9H0E7 712 aa7.58□□□□□ -1.2
HERC1-208ENST00000560462 PRORYQ9H606 182 aa7.58□□□□□ -1.2
HERC1-208ENST00000560462 PIH1D3Q9NQM4 214 aaKnown RBP7.58□□□□□ -1.2
HERC1-208ENST00000560462 NYAP2Q9P242 653 aa7.58□□□□□ -1.2
HERC1-208ENST00000560462 DKK4Q9UBT3 224 aa7.58□□□□□ -1.2
HERC1-208ENST00000560462 NDRG2Q9UN36 371 aaKnown RBP7.58□□□□□ -1.2
HERC1-208ENST00000560462 RBM19Q9Y4C8 960 aaKnown RBP7.58□□□□□ -1.2
HERC1-208ENST00000560462 SALL3Q9BXA9 1300 aa7.57□□□□□ -1.2
HERC1-208ENST00000560462 NFIBO00712 420 aa7.57□□□□□ -1.2
HERC1-208ENST00000560462 IDH1O75874 414 aaKnown RBP7.57□□□□□ -1.2
HERC1-208ENST00000560462 BMP3P12645 472 aa7.57□□□□□ -1.2
HERC1-208ENST00000560462 SARSP49591 514 aaKnown RBP7.57□□□□□ -1.2
HERC1-208ENST00000560462 MGAT3Q09327 533 aa7.57□□□□□ -1.2
HERC1-208ENST00000560462 SERINC3Q13530 473 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms