RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 TSPYL2Q9H2G4 693 aaPredicted RBP18.69■□□□□ 0.58
RPL28-209ENST00000560055 BLOC1S4Q9NUP1 217 aa18.69■□□□□ 0.58
RPL28-209ENST00000560055 ATP6V1DQ9Y5K8 247 aa18.69■□□□□ 0.58
RPL28-209ENST00000560055 GRXCR1A8MXD5 290 aa18.68■□□□□ 0.58
RPL28-209ENST00000560055 KCNJ6P48051 423 aa18.68■□□□□ 0.58
RPL28-209ENST00000560055 NFX1Q12986 1120 aaKnown RBP18.68■□□□□ 0.58
RPL28-209ENST00000560055 CAPSQ13938 189 aa18.68■□□□□ 0.58
RPL28-209ENST00000560055 ODR4Q5SWX8 454 aa18.68■□□□□ 0.58
RPL28-209ENST00000560055 RINT1Q6NUQ1 792 aa18.68■□□□□ 0.58
RPL28-209ENST00000560055 C1orf186Q6ZWK4 172 aa18.68■□□□□ 0.58
RPL28-209ENST00000560055 RTN4RL1Q86UN2 441 aaPredicted RBP18.68■□□□□ 0.58
RPL28-209ENST00000560055 IFNLR1Q8IU57 520 aaPredicted RBP18.68■□□□□ 0.58
RPL28-209ENST00000560055 RNF149Q8NC42 400 aa18.68■□□□□ 0.58
RPL28-209ENST00000560055 SCLT1Q96NL6 688 aa18.68■□□□□ 0.58
RPL28-209ENST00000560055 RUSC1Q9BVN2 902 aa18.68■□□□□ 0.58
RPL28-209ENST00000560055 A0A0C4DFX4 3053 aa18.68■□□□□ 0.58
RPL28-209ENST00000560055 PTPRSQ13332 1948 aa18.67■□□□□ 0.58
RPL28-209ENST00000560055 ENPP3O14638 875 aa18.67■□□□□ 0.58
RPL28-209ENST00000560055 CUTAO60888 179 aa18.67■□□□□ 0.58
RPL28-209ENST00000560055 CSDE1O75534 798 aaKnown RBP18.67■□□□□ 0.58
RPL28-209ENST00000560055 PLA2G4BP0C869 781 aa18.67■□□□□ 0.58
RPL28-209ENST00000560055 SRGAP2CP0DJJ0 459 aa18.67■□□□□ 0.58
RPL28-209ENST00000560055 GUCY2CP25092 1073 aa18.67■□□□□ 0.58
RPL28-209ENST00000560055 PTENP60484 403 aa18.67■□□□□ 0.58
RPL28-209ENST00000560055 KRT85P78386 507 aa18.67■□□□□ 0.58
RPL28-209ENST00000560055 FAM102BQ5T8I3 360 aa18.67■□□□□ 0.58
RPL28-209ENST00000560055 MAEAQ7L5Y9 396 aa18.67■□□□□ 0.58
RPL28-209ENST00000560055 SRGAP1Q7Z6B7 1085 aa18.67■□□□□ 0.58
RPL28-209ENST00000560055 HERC6Q8IVU3 1022 aa18.67■□□□□ 0.58
RPL28-209ENST00000560055 DAW1Q8N136 415 aa18.67■□□□□ 0.58
RPL28-209ENST00000560055 RAD54LQ92698 747 aa18.67■□□□□ 0.58
RPL28-209ENST00000560055 GUCD1Q96NT3 240 aa18.67■□□□□ 0.58
RPL28-209ENST00000560055 NFKBIZQ9BYH8 718 aa18.67■□□□□ 0.58
RPL28-209ENST00000560055 MINDY3Q9H8M7 445 aa18.67■□□□□ 0.58
RPL28-209ENST00000560055 MGEA5O60502 916 aa18.66■□□□□ 0.58
RPL28-209ENST00000560055 AMHP03971 560 aa18.66■□□□□ 0.58
RPL28-209ENST00000560055 TXLNAP40222 546 aa18.66■□□□□ 0.58
RPL28-209ENST00000560055 MAPK7Q13164 816 aa18.66■□□□□ 0.58
RPL28-209ENST00000560055 DSC3Q14574 896 aa18.66■□□□□ 0.58
RPL28-209ENST00000560055 NAALADL2Q58DX5 795 aa18.66■□□□□ 0.58
RPL28-209ENST00000560055 SHC4Q6S5L8 630 aa18.66■□□□□ 0.58
RPL28-209ENST00000560055 CRIPAKQ8N1N5 446 aa18.66■□□□□ 0.58
RPL28-209ENST00000560055 LEO1Q8WVC0 666 aaPredicted RBP18.66■□□□□ 0.58
RPL28-209ENST00000560055 BSNDQ8WZ55 320 aa18.66■□□□□ 0.58
RPL28-209ENST00000560055 KIFAP3Q92845 792 aa18.66■□□□□ 0.58
RPL28-209ENST00000560055 TOP1MTQ969P6 601 aa18.66■□□□□ 0.58
RPL28-209ENST00000560055 PBX4Q9BYU1 374 aa18.66■□□□□ 0.58
RPL28-209ENST00000560055 INO80BQ9C086 356 aaPredicted RBP18.66■□□□□ 0.58
RPL28-209ENST00000560055 KCND2Q9NZV8 630 aa18.66■□□□□ 0.58
RPL28-209ENST00000560055 CIZ1Q9ULV3 898 aaPredicted RBP18.66■□□□□ 0.58
RPL28-209ENST00000560055 PCDHA7Q9UN72 937 aa18.66■□□□□ 0.58
RPL28-209ENST00000560055 STXBP5LQ9Y2K9 1186 aa18.66■□□□□ 0.58
RPL28-209ENST00000560055 TTC3P53804 2025 aa18.66■□□□□ 0.58
RPL28-209ENST00000560055 A0A087X0B3 334 aa18.65■□□□□ 0.58
RPL28-209ENST00000560055 GJB5O95377 273 aa18.65■□□□□ 0.58
RPL28-209ENST00000560055 FGFR4P22455 802 aa18.65■□□□□ 0.58
RPL28-209ENST00000560055 SFPQP23246 707 aaKnown RBP eCLIP18.65■□□□□ 0.58
RPL28-209ENST00000560055 PHKA2P46019 1235 aa18.65■□□□□ 0.58
RPL28-209ENST00000560055 ME1P48163 572 aa18.65■□□□□ 0.58
RPL28-209ENST00000560055 TFDP1Q14186 410 aa18.65■□□□□ 0.58
RPL28-209ENST00000560055 ARSHQ5FYA8 562 aa18.65■□□□□ 0.58
RPL28-209ENST00000560055 CDCA2Q69YH5 1023 aaPredicted RBP18.65■□□□□ 0.58
RPL28-209ENST00000560055 TMCO2Q7Z6W1 182 aaPredicted RBP18.65■□□□□ 0.58
RPL28-209ENST00000560055 RASSF8Q8NHQ8 419 aa18.65■□□□□ 0.58
RPL28-209ENST00000560055 TIPINQ9BVW5 301 aa18.65■□□□□ 0.58
RPL28-209ENST00000560055 STK17AQ9UEE5 414 aa18.65■□□□□ 0.58
RPL28-209ENST00000560055 CCDC39Q9UFE4 941 aa18.65■□□□□ 0.58
RPL28-209ENST00000560055 HIP1RO75146 1068 aa18.64■□□□□ 0.57
RPL28-209ENST00000560055 PBX2P40425 430 aa18.64■□□□□ 0.57
RPL28-209ENST00000560055 RABGGTBP53611 331 aa18.64■□□□□ 0.57
RPL28-209ENST00000560055 MCM6Q14566 821 aa18.64■□□□□ 0.57
RPL28-209ENST00000560055 ZNF697Q5TEC3 545 aa18.64■□□□□ 0.57
RPL28-209ENST00000560055 MYOCDQ8IZQ8 938 aa18.64■□□□□ 0.57
RPL28-209ENST00000560055 SLC17A8Q8NDX2 589 aa18.64■□□□□ 0.57
RPL28-209ENST00000560055 LARP4BQ92615 738 aaKnown RBP18.64■□□□□ 0.57
RPL28-209ENST00000560055 ADAM2Q99965 735 aa18.64■□□□□ 0.57
RPL28-209ENST00000560055 POLD4Q9HCU8 107 aa18.64■□□□□ 0.57
RPL28-209ENST00000560055 RGS18Q9NS28 235 aa18.64■□□□□ 0.57
RPL28-209ENST00000560055 PCDHA11Q9Y5I1 949 aa18.64■□□□□ 0.57
RPL28-209ENST00000560055 SSBP05455 408 aaKnown RBP eCLIP18.63■□□□□ 0.57
RPL28-209ENST00000560055 NCLP19338 710 aaKnown RBP18.63■□□□□ 0.57
RPL28-209ENST00000560055 DNAJB2P25686 324 aa18.63■□□□□ 0.57
RPL28-209ENST00000560055 NAMPTP43490 491 aa18.63■□□□□ 0.57
RPL28-209ENST00000560055 HTRA4P83105 476 aaPredicted RBP18.63■□□□□ 0.57
RPL28-209ENST00000560055 MBTD1Q05BQ5 628 aa18.63■□□□□ 0.57
RPL28-209ENST00000560055 PCBP1Q15365 356 aaKnown RBP eCLIP18.63■□□□□ 0.572e-6■■□□□ 13.9
RPL28-209ENST00000560055 RAB30Q15771 203 aa18.63■□□□□ 0.57
RPL28-209ENST00000560055 RRAGBQ5VZM2 374 aa18.63■□□□□ 0.57
RPL28-209ENST00000560055 CCDC73Q6ZRK6 1079 aa18.63■□□□□ 0.57
RPL28-209ENST00000560055 SPATA32Q96LK8 384 aa18.63■□□□□ 0.57
RPL28-209ENST00000560055 SCAND2PQ9GZW5 306 aaPredicted RBP18.63■□□□□ 0.57
RPL28-209ENST00000560055 TTYH1Q9H313 450 aaPredicted RBP18.63■□□□□ 0.57
RPL28-209ENST00000560055 CHST12Q9NRB3 414 aa18.63■□□□□ 0.57
RPL28-209ENST00000560055 C1orf112Q9NSG2 853 aa18.63■□□□□ 0.57
RPL28-209ENST00000560055 AGPAT5Q9NUQ2 364 aa18.63■□□□□ 0.57
RPL28-209ENST00000560055 YBX2Q9Y2T7 364 aaKnown RBP18.63■□□□□ 0.57
RPL28-209ENST00000560055 EYSQ5T1H1 3165 aa18.63■□□□□ 0.57
RPL28-209ENST00000560055 TCHHQ07283 1943 aa18.62■□□□□ 0.57
RPL28-209ENST00000560055 LRRIQ4A6NIV6 560 aa18.62■□□□□ 0.57
RPL28-209ENST00000560055 C9IYK1 514 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms