RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 SMARCC2Q8TAQ2 1214 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 CYP2W1Q8TAV3 490 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 RUFY2Q8WXA3 655 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 GPRASP2Q96D09 838 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 RRP36Q96EU6 259 aaKnown RBP6.66□□□□□ -1.34
USP3-215ENST00000559771 MTA3Q9BTC8 594 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 IFIH1Q9BYX4 1025 aaKnown RBP6.66□□□□□ -1.34
USP3-215ENST00000559771 GRIP2Q9C0E4 1043 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 KLF15Q9UIH9 416 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 CDV3Q9UKY7 258 aaKnown RBP6.66□□□□□ -1.34
USP3-215ENST00000559771 NRCAMQ92823 1304 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 PLXNA4Q9HCM2 1894 aa6.66□□□□□ -1.34
USP3-215ENST00000559771 ERVH48-1M5A8F1 160 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 SLC27A2O14975 620 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 ADAMTS3O15072 1205 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 DGKIO75912 1065 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 DNAJB1P25685 340 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 MARK3P27448 753 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 GTF2F1P35269 517 aaKnown RBP eCLIP6.65□□□□□ -1.34
USP3-215ENST00000559771 BMPR1AP36894 532 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 LIFRP42702 1097 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 ITGB3BPQ13352 177 aaPredicted RBP6.65□□□□□ -1.34
USP3-215ENST00000559771 SART3Q15020 963 aaKnown RBP6.65□□□□□ -1.34
USP3-215ENST00000559771 GRIK4Q16099 956 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 TMEM31Q5JXX7 168 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 TMTC3Q6ZXV5 915 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 SKAP1Q86WV1 359 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 GJD3Q8N144 294 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 CTCFLQ8NI51 663 aaPredicted RBP6.65□□□□□ -1.34
USP3-215ENST00000559771 DNAJB3Q8WWF6 145 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 SEPT1Q8WYJ6 367 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 APBB2Q92870 758 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 CLP1Q92989 425 aaKnown RBP6.65□□□□□ -1.34
USP3-215ENST00000559771 PABPC5Q96DU9 382 aaKnown RBP6.65□□□□□ -1.34
USP3-215ENST00000559771 IL17RAQ96F46 866 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 SAMD11Q96NU1 681 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 YME1L1Q96TA2 773 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 LRRC2Q9BYS8 371 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 TMX1Q9H3N1 280 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 PSTPIP2Q9H939 334 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 JADE2Q9NQC1 790 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 NDFIP2Q9NV92 336 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 ZNF215Q9UL58 517 aaPredicted RBP6.65□□□□□ -1.34
USP3-215ENST00000559771 PCDHA6Q9UN73 950 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 PCDHA8Q9Y5H6 950 aa6.65□□□□□ -1.34
USP3-215ENST00000559771 FNDC1Q4ZHG4 1894 aaPredicted RBP6.64□□□□□ -1.35
USP3-215ENST00000559771 MYO7AQ13402 2215 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 ATG7O95352 703 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 CCNE2O96020 404 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 ARP10275 920 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 GNAT1P11488 350 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 BMP4P12644 408 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 INSRRP14616 1297 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 KIF5BP33176 963 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 MCM5P33992 734 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 CTNNB1P35222 781 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 EXOSC10Q01780 885 aaKnown RBP6.64□□□□□ -1.35
USP3-215ENST00000559771 ZP2Q05996 745 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 HYAL1Q12794 435 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 PPFIA1Q13136 1202 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 MTMR1Q13613 665 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 TIGD5Q53EQ6 642 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 CREB3L3Q68CJ9 461 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 WWC2Q6AWC2 1192 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 TAF2Q6P1X5 1199 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 NLRX1Q86UT6 975 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 SGMS1Q86VZ5 419 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 CCDC82Q8N4S0 544 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 FIBCD1Q8N539 461 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 FANCBQ8NB91 859 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 GIMAP8Q8ND71 665 aaPredicted RBP6.64□□□□□ -1.35
USP3-215ENST00000559771 TRAPPC12Q8WVT3 735 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 CUL5Q93034 780 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 FAM122AQ96E09 287 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 PGBD1Q96JS3 809 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 TMEM87BQ96K49 555 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 LZTS2Q9BRK4 669 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 ESYT1Q9BSJ8 1104 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 NSUN3Q9H649 340 aaKnown RBP6.64□□□□□ -1.35
USP3-215ENST00000559771 KCNH7Q9NS40 1196 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 ERAP1Q9NZ08 941 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 TUBE1Q9UJT0 475 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 BRPF3Q9ULD4 1205 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 CDY2AQ9Y6F7 541 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 MRPL42Q9Y6G3 142 aaKnown RBP6.64□□□□□ -1.35
USP3-215ENST00000559771 ADGRA3Q8IWK6 1321 aa6.64□□□□□ -1.35
USP3-215ENST00000559771 IGKV6D-21A0A0A0MT36 114 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 ZBTB42B2RXF5 422 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 STXBP3O00186 592 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 MAFGO15525 162 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 LINC01565O15544 149 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 DHX15O43143 795 aaKnown RBP6.63□□□□□ -1.35
USP3-215ENST00000559771 EDIL3O43854 480 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 MGEA5O60502 916 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 TBX10O75333 385 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 RB1P06400 928 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 ATP4AP20648 1035 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 CD52P31358 61 aa6.63□□□□□ -1.35
USP3-215ENST00000559771 CLK2P49760 499 aaKnown RBP6.63□□□□□ -1.35
USP3-215ENST00000559771 GNAQP50148 359 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms