RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 ARL2P36404 184 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 GPC3P51654 580 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 PEX3P56589 373 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 MAPK7Q13164 816 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 CUL4BQ13620 913 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 CAPSQ13938 189 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 GIT2Q14161 759 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 DAW1Q8N136 415 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 KCTD17Q8N5Z5 321 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 ENGASEQ8NFI3 743 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 DRC1Q96MC2 740 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 FDXACB1Q9BRP7 624 aaPredicted RBP13.76□□□□□ -0.21
GABPB1-208ENST00000558970 CELF4Q9BZC1 486 aaKnown RBP13.76□□□□□ -0.21
GABPB1-208ENST00000558970 TNMDQ9H2S6 317 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 KBTBD4Q9NVX7 518 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 DACT1Q9NYF0 836 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 TBC1D7Q9P0N9 293 aa13.76□□□□□ -0.21
GABPB1-208ENST00000558970 TET1Q8NFU7 2136 aa13.75□□□□□ -0.21
GABPB1-208ENST00000558970 PITPNM1O00562 1244 aa13.75□□□□□ -0.21
GABPB1-208ENST00000558970 GPR32O75388 356 aa13.75□□□□□ -0.21
GABPB1-208ENST00000558970 IQCF3P0C7M6 154 aa13.75□□□□□ -0.21
GABPB1-208ENST00000558970 ACRP10323 421 aa13.75□□□□□ -0.21
GABPB1-208ENST00000558970 CSF2RAP15509 400 aa13.75□□□□□ -0.21
GABPB1-208ENST00000558970 IBSPP21815 317 aaPredicted RBP13.75□□□□□ -0.21
GABPB1-208ENST00000558970 GUCY2CP25092 1073 aa13.75□□□□□ -0.21
GABPB1-208ENST00000558970 MCM4P33991 863 aa13.75□□□□□ -0.21
GABPB1-208ENST00000558970 MGAT3Q09327 533 aa13.75□□□□□ -0.21
GABPB1-208ENST00000558970 PNOCQ13519 176 aa13.75□□□□□ -0.21
GABPB1-208ENST00000558970 MBTPS1Q14703 1052 aa13.75□□□□□ -0.21
GABPB1-208ENST00000558970 CAMK4Q16566 473 aa13.75□□□□□ -0.21
GABPB1-208ENST00000558970 SFR1Q86XK3 245 aa13.75□□□□□ -0.21
GABPB1-208ENST00000558970 NME8Q8N427 588 aa13.75□□□□□ -0.21
GABPB1-208ENST00000558970 MYCT1Q8N699 235 aa13.75□□□□□ -0.21
GABPB1-208ENST00000558970 TMEM40Q8WWA1 233 aa13.75□□□□□ -0.21
GABPB1-208ENST00000558970 KIFAP3Q92845 792 aa13.75□□□□□ -0.21
GABPB1-208ENST00000558970 IFT74Q96LB3 600 aa13.75□□□□□ -0.21
GABPB1-208ENST00000558970 TRIM9Q9C026 710 aa13.75□□□□□ -0.21
GABPB1-208ENST00000558970 MAGEF1Q9HAY2 307 aa13.75□□□□□ -0.21
GABPB1-208ENST00000558970 A0A0C4DFX4 3053 aa13.75□□□□□ -0.21
GABPB1-208ENST00000558970 SLC16A4O15374 487 aa13.74□□□□□ -0.21
GABPB1-208ENST00000558970 NBNO60934 754 aa13.74□□□□□ -0.21
GABPB1-208ENST00000558970 AMPD3Q01432 767 aa13.74□□□□□ -0.21
GABPB1-208ENST00000558970 TFDP1Q14186 410 aa13.74□□□□□ -0.21
GABPB1-208ENST00000558970 MXD4Q14582 209 aaPredicted RBP13.74□□□□□ -0.21
GABPB1-208ENST00000558970 ODR4Q5SWX8 454 aa13.74□□□□□ -0.21
GABPB1-208ENST00000558970 TRAF7Q6Q0C0 670 aa13.74□□□□□ -0.21
GABPB1-208ENST00000558970 GPT2Q8TD30 523 aa13.74□□□□□ -0.21
GABPB1-208ENST00000558970 HPS3Q969F9 1004 aa13.74□□□□□ -0.21
GABPB1-208ENST00000558970 DNAJC19Q96DA6 116 aa13.74□□□□□ -0.21
GABPB1-208ENST00000558970 LBHD1Q9BQE6 289 aaPredicted RBP13.74□□□□□ -0.21
GABPB1-208ENST00000558970 ADAMTS10Q9H324 1103 aa13.74□□□□□ -0.21
GABPB1-208ENST00000558970 MINDY3Q9H8M7 445 aa13.74□□□□□ -0.21
GABPB1-208ENST00000558970 KMT5AQ9NQR1 393 aa13.74□□□□□ -0.21
GABPB1-208ENST00000558970 PANK4Q9NVE7 773 aa13.74□□□□□ -0.21
GABPB1-208ENST00000558970 KCND2Q9NZV8 630 aa13.74□□□□□ -0.21
GABPB1-208ENST00000558970 USP25Q9UHP3 1055 aa13.74□□□□□ -0.21
GABPB1-208ENST00000558970 ODF2LQ9ULJ1 636 aa13.74□□□□□ -0.21
GABPB1-208ENST00000558970 NOC2LQ9Y3T9 749 aaKnown RBP13.74□□□□□ -0.21
GABPB1-208ENST00000558970 MICAL3Q7RTP6 2002 aa13.74□□□□□ -0.21
GABPB1-208ENST00000558970 CUL9Q8IWT3 2517 aa13.73□□□□□ -0.21
GABPB1-208ENST00000558970 ADGRA3Q8IWK6 1321 aa13.73□□□□□ -0.21
GABPB1-208ENST00000558970 PTPRSQ13332 1948 aa13.73□□□□□ -0.21
GABPB1-208ENST00000558970 INO80B-WBP1J3KQ70 363 aa13.73□□□□□ -0.21
GABPB1-208ENST00000558970 K7ENM7 598 aa13.73□□□□□ -0.21
GABPB1-208ENST00000558970 CD52P31358 61 aa13.73□□□□□ -0.21
GABPB1-208ENST00000558970 PHKA2P46019 1235 aa13.73□□□□□ -0.21
GABPB1-208ENST00000558970 NPTX2P47972 431 aa13.73□□□□□ -0.21
GABPB1-208ENST00000558970 NFX1Q12986 1120 aaKnown RBP13.73□□□□□ -0.21
GABPB1-208ENST00000558970 COASYQ13057 564 aa13.73□□□□□ -0.21
GABPB1-208ENST00000558970 DMP1Q13316 513 aaPredicted RBP13.73□□□□□ -0.21
GABPB1-208ENST00000558970 LPIN1Q14693 890 aa13.73□□□□□ -0.21
GABPB1-208ENST00000558970 POSTNQ15063 836 aa13.73□□□□□ -0.21
GABPB1-208ENST00000558970 FBXO47Q5MNV8 452 aa13.73□□□□□ -0.21
GABPB1-208ENST00000558970 MFSD5Q6N075 450 aa13.73□□□□□ -0.21
GABPB1-208ENST00000558970 TMEM199Q8N511 208 aa13.73□□□□□ -0.21
GABPB1-208ENST00000558970 DEPTORQ8TB45 409 aa13.73□□□□□ -0.21
GABPB1-208ENST00000558970 TIPINQ9BVW5 301 aa13.73□□□□□ -0.21
GABPB1-208ENST00000558970 GCOM2Q9BZD3 368 aaPredicted RBP13.73□□□□□ -0.21
GABPB1-208ENST00000558970 INO80BQ9C086 356 aaPredicted RBP13.73□□□□□ -0.21
GABPB1-208ENST00000558970 LRRC27Q9C0I9 530 aa13.73□□□□□ -0.21
GABPB1-208ENST00000558970 IFT122Q9HBG6 1241 aa13.73□□□□□ -0.21
GABPB1-208ENST00000558970 PARVGQ9HBI0 331 aa13.73□□□□□ -0.21
GABPB1-208ENST00000558970 USP20Q9Y2K6 914 aa13.73□□□□□ -0.21
GABPB1-208ENST00000558970 ASAP2O43150 1006 aa13.72□□□□□ -0.21
GABPB1-208ENST00000558970 GTPBP6O43824 516 aaPredicted RBP13.72□□□□□ -0.21
GABPB1-208ENST00000558970 CAND2O75155 1236 aa13.72□□□□□ -0.21
GABPB1-208ENST00000558970 RPS6KA5O75582 802 aa13.72□□□□□ -0.21
GABPB1-208ENST00000558970 RPLP2P05387 115 aaKnown RBP13.72□□□□□ -0.21
GABPB1-208ENST00000558970 PLS3P13797 630 aa13.72□□□□□ -0.21
GABPB1-208ENST00000558970 NMT1P30419 496 aaKnown RBP13.72□□□□□ -0.21
GABPB1-208ENST00000558970 CRYBB1P53674 252 aaPredicted RBP13.72□□□□□ -0.21
GABPB1-208ENST00000558970 FPGSQ05932 587 aa13.72□□□□□ -0.21
GABPB1-208ENST00000558970 RBL2Q08999 1139 aa13.72□□□□□ -0.21
GABPB1-208ENST00000558970 PAK2Q13177 524 aa13.72□□□□□ -0.21
GABPB1-208ENST00000558970 PPP2R5AQ15172 486 aa13.72□□□□□ -0.21
GABPB1-208ENST00000558970 TMEM132AQ24JP5 1023 aa13.72□□□□□ -0.21
GABPB1-208ENST00000558970 HERC4Q5GLZ8 1057 aaPredicted RBP13.72□□□□□ -0.21
GABPB1-208ENST00000558970 FAM26DQ5JW98 314 aa13.72□□□□□ -0.21
GABPB1-208ENST00000558970 CATSPER4Q7RTX7 472 aa13.72□□□□□ -0.21
GABPB1-208ENST00000558970 RPAINQ86UA6 219 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms