RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 YTHDC1Q96MU7 727 aaKnown RBP7.5□□□□□ -1.21
LRRC28-209ENST00000558861 CELF4Q9BZC1 486 aaKnown RBP7.5□□□□□ -1.21
LRRC28-209ENST00000558861 EPB41L1Q9H4G0 881 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 CAAP1Q9H8G2 361 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 PCDH12Q9NPG4 1184 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 SMC4Q9NTJ3 1288 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 CBLCQ9ULV8 474 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 TNNQ9UQP3 1299 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 NIP7Q9Y221 180 aaKnown RBP eCLIP7.5□□□□□ -1.21
LRRC28-209ENST00000558861 COA3Q9Y2R0 106 aaPredicted RBP7.5□□□□□ -1.21
LRRC28-209ENST00000558861 MAP3K2Q9Y2U5 619 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 ARFGEF2Q9Y6D5 1785 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 RIC1Q4ADV7 1423 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 NUP98P52948 1817 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 PTPRCP08575 1304 aa7.5□□□□□ -1.21
LRRC28-209ENST00000558861 KIAA1551Q9HCM1 1747 aa7.49□□□□□ -1.21
LRRC28-209ENST00000558861 A0A1W2PQJ5 194 aa7.49□□□□□ -1.21
LRRC28-209ENST00000558861 NTRK1P04629 796 aa7.49□□□□□ -1.21
LRRC28-209ENST00000558861 SERPINB2P05120 415 aa7.49□□□□□ -1.21
LRRC28-209ENST00000558861 COL6A2P12110 1019 aa7.49□□□□□ -1.21
LRRC28-209ENST00000558861 TRIM27P14373 513 aa7.49□□□□□ -1.21
LRRC28-209ENST00000558861 POU3F3P20264 500 aaPredicted RBP7.49□□□□□ -1.21
LRRC28-209ENST00000558861 GPTP24298 496 aa7.49□□□□□ -1.21
LRRC28-209ENST00000558861 SOX5P35711 763 aa7.49□□□□□ -1.21
LRRC28-209ENST00000558861 AMPD3Q01432 767 aa7.49□□□□□ -1.21
LRRC28-209ENST00000558861 SKOR2Q2VWA4 1001 aaPredicted RBP7.49□□□□□ -1.21
LRRC28-209ENST00000558861 FAM47CQ5HY64 1035 aa7.49□□□□□ -1.21
LRRC28-209ENST00000558861 UBE2R2Q712K3 238 aaPredicted RBP7.49□□□□□ -1.21
LRRC28-209ENST00000558861 CBLL1Q75N03 491 aa7.49□□□□□ -1.21
LRRC28-209ENST00000558861 SYNE4Q8N205 404 aa7.49□□□□□ -1.21
LRRC28-209ENST00000558861 DNAAF4Q8WXU2 420 aa7.49□□□□□ -1.21
LRRC28-209ENST00000558861 ARHGAP45Q92619 1136 aa7.49□□□□□ -1.21
LRRC28-209ENST00000558861 RXFP1Q9HBX9 757 aa7.49□□□□□ -1.21
LRRC28-209ENST00000558861 TNFRSF12AQ9NP84 129 aa7.49□□□□□ -1.21
LRRC28-209ENST00000558861 ADGRE2Q9UHX3 823 aa7.49□□□□□ -1.21
LRRC28-209ENST00000558861 NOB1Q9ULX3 412 aaKnown RBP7.49□□□□□ -1.21
LRRC28-209ENST00000558861 ZNF652Q9Y2D9 606 aa7.49□□□□□ -1.21
LRRC28-209ENST00000558861 KIF13BQ9NQT8 1826 aa7.49□□□□□ -1.21
LRRC28-209ENST00000558861 ABCC4O15439 1325 aa7.49□□□□□ -1.21
LRRC28-209ENST00000558861 RNF123Q5XPI4 1314 aa7.49□□□□□ -1.21
LRRC28-209ENST00000558861 AFDNP55196 1824 aaKnown RBP7.48□□□□□ -1.21
LRRC28-209ENST00000558861 M0R2C6 588 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 DDX58O95786 925 aaKnown RBP7.48□□□□□ -1.21
LRRC28-209ENST00000558861 GLI4P10075 376 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 GNAT1P11488 350 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 KCNA3P22001 575 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 ST5P78524 1137 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 SNX17Q15036 470 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 CRY2Q49AN0 593 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 PARP10Q53GL7 1025 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 TMEM177Q53S58 311 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 HSP90AB3PQ58FF7 597 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 CT47A1Q5JQC4 288 aaPredicted RBP7.48□□□□□ -1.21
LRRC28-209ENST00000558861 SLC10A5Q5PT55 438 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 MROH9Q5TGP6 573 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 RIOX2Q8IUF8 465 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 CCDC191Q8NCU4 936 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 LINS1Q8NG48 757 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 KIRREL1Q96J84 757 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 WNK4Q96J92 1243 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 MYD88Q99836 296 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 CRTAC1Q9NQ79 661 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 CATSPERZQ9NTU4 200 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 RCAN3Q9UKA8 241 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 ANKRD36CQ5JPF3 1778 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 UTYO14607 1347 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 KIF16BQ96L93 1317 aa7.48□□□□□ -1.21
LRRC28-209ENST00000558861 ANKRD31Q8N7Z5 1873 aa7.47□□□□□ -1.21
LRRC28-209ENST00000558861 CBX4O00257 560 aa7.47□□□□□ -1.21
LRRC28-209ENST00000558861 NKRFO15226 690 aaKnown RBP eCLIP7.47□□□□□ -1.21
LRRC28-209ENST00000558861 DGKIO75912 1065 aa7.47□□□□□ -1.21
LRRC28-209ENST00000558861 PNLIPP16233 465 aa7.47□□□□□ -1.21
LRRC28-209ENST00000558861 PDE6AP16499 860 aa7.47□□□□□ -1.21
LRRC28-209ENST00000558861 POLD1P28340 1107 aa7.47□□□□□ -1.21
LRRC28-209ENST00000558861 AFMP43652 599 aa7.47□□□□□ -1.21
LRRC28-209ENST00000558861 RBM10P98175 930 aaKnown RBP7.47□□□□□ -1.21
LRRC28-209ENST00000558861 GCKRQ14397 625 aa7.47□□□□□ -1.21
LRRC28-209ENST00000558861 ATF7IPQ6VMQ6 1270 aa7.47□□□□□ -1.21
LRRC28-209ENST00000558861 C16orf59Q7L2K0 433 aa7.47□□□□□ -1.21
LRRC28-209ENST00000558861 OVCH1Q7RTY7 1134 aa7.47□□□□□ -1.21
LRRC28-209ENST00000558861 STRA8Q7Z7C7 330 aa7.47□□□□□ -1.21
LRRC28-209ENST00000558861 CABP7Q86V35 215 aa7.47□□□□□ -1.21
LRRC28-209ENST00000558861 AHI1Q8N157 1196 aa7.47□□□□□ -1.21
LRRC28-209ENST00000558861 PIP4K2CQ8TBX8 421 aa7.47□□□□□ -1.21
LRRC28-209ENST00000558861 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.47□□□□□ -1.21
LRRC28-209ENST00000558861 YBX2Q9Y2T7 364 aaKnown RBP7.47□□□□□ -1.21
LRRC28-209ENST00000558861 SIT1Q9Y3P8 196 aa7.47□□□□□ -1.21
LRRC28-209ENST00000558861 TNRC6CQ9HCJ0 1690 aaKnown RBP7.47□□□□□ -1.21
LRRC28-209ENST00000558861 ZNF891A8MT65 544 aaPredicted RBP7.46□□□□□ -1.22
LRRC28-209ENST00000558861 ZNF561-AS1K7EIQ3 104 aa7.46□□□□□ -1.22
LRRC28-209ENST00000558861 ALDH1L1O75891 902 aa7.46□□□□□ -1.22
LRRC28-209ENST00000558861 PCCAP05165 728 aaPredicted RBP7.46□□□□□ -1.22
LRRC28-209ENST00000558861 DBHP09172 617 aa7.46□□□□□ -1.22
LRRC28-209ENST00000558861 KRT15P19012 456 aa7.46□□□□□ -1.22
LRRC28-209ENST00000558861 ARL4AP40617 200 aa7.46□□□□□ -1.22
LRRC28-209ENST00000558861 HABP4Q5JVS0 413 aaKnown RBP7.46□□□□□ -1.22
LRRC28-209ENST00000558861 OTOP3Q7RTS5 596 aa7.46□□□□□ -1.22
LRRC28-209ENST00000558861 ATG4DQ86TL0 474 aaPredicted RBP7.46□□□□□ -1.22
LRRC28-209ENST00000558861 OSTM1Q86WC4 334 aa7.46□□□□□ -1.22
LRRC28-209ENST00000558861 NBPF5PQ86XG9 351 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms