RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 PAN2Q504Q3 1202 aaKnown RBP9.08□□□□□ -0.96
TRAF3-205ENST00000558700 PTCRAQ6ISU1 281 aaPredicted RBP9.08□□□□□ -0.96
TRAF3-205ENST00000558700 MOXD1Q6UVY6 613 aa9.08□□□□□ -0.96
TRAF3-205ENST00000558700 EP400NLQ6ZTU2 488 aa9.08□□□□□ -0.96
TRAF3-205ENST00000558700 TRMT1LQ7Z2T5 733 aaKnown RBP9.08□□□□□ -0.96
TRAF3-205ENST00000558700 MIER3Q7Z3K6 550 aa9.08□□□□□ -0.96
TRAF3-205ENST00000558700 FAM228AQ86W67 206 aa9.08□□□□□ -0.96
TRAF3-205ENST00000558700 NEK9Q8TD19 979 aa9.08□□□□□ -0.96
TRAF3-205ENST00000558700 TMEM40Q8WWA1 233 aa9.08□□□□□ -0.96
TRAF3-205ENST00000558700 PPP1R16BQ96T49 567 aa9.08□□□□□ -0.96
TRAF3-205ENST00000558700 TMX1Q9H3N1 280 aa9.08□□□□□ -0.96
TRAF3-205ENST00000558700 UNC45AQ9H3U1 944 aa9.08□□□□□ -0.96
TRAF3-205ENST00000558700 AAASQ9NRG9 546 aa9.08□□□□□ -0.96
TRAF3-205ENST00000558700 PDRG1Q9NUG6 133 aa9.08□□□□□ -0.96
TRAF3-205ENST00000558700 CLDND1Q9NY35 253 aa9.08□□□□□ -0.96
TRAF3-205ENST00000558700 ARID2Q68CP9 1835 aa9.08□□□□□ -0.96
TRAF3-205ENST00000558700 CCDC194A0A1B0GVG4 234 aa9.07□□□□□ -0.96
TRAF3-205ENST00000558700 C9IYK1 514 aa9.07□□□□□ -0.96
TRAF3-205ENST00000558700 CFAP99D6REC4 459 aa9.07□□□□□ -0.96
TRAF3-205ENST00000558700 H3BQ06 376 aaPredicted RBP9.07□□□□□ -0.96
TRAF3-205ENST00000558700 ZNF862O60290 1169 aa9.07□□□□□ -0.96
TRAF3-205ENST00000558700 CSPG5O95196 566 aa9.07□□□□□ -0.96
TRAF3-205ENST00000558700 TDP2O95551 362 aa9.07□□□□□ -0.96
TRAF3-205ENST00000558700 HOXB1P14653 301 aaPredicted RBP9.07□□□□□ -0.96
TRAF3-205ENST00000558700 IL9P15248 144 aa9.07□□□□□ -0.96
TRAF3-205ENST00000558700 XBP1P17861 261 aa9.07□□□□□ -0.96
TRAF3-205ENST00000558700 IBSPP21815 317 aaPredicted RBP9.07□□□□□ -0.96
TRAF3-205ENST00000558700 TBC1D8BQ0IIM8 1120 aa9.07□□□□□ -0.96
TRAF3-205ENST00000558700 SPOUT1Q5T280 376 aaKnown RBP9.07□□□□□ -0.96
TRAF3-205ENST00000558700 SLC24A5Q71RS6 500 aa9.07□□□□□ -0.96
TRAF3-205ENST00000558700 RTN4RL1Q86UN2 441 aaPredicted RBP9.07□□□□□ -0.96
TRAF3-205ENST00000558700 FAM178BQ8IXR5 827 aa9.07□□□□□ -0.96
TRAF3-205ENST00000558700 CRIPAKQ8N1N5 446 aa9.07□□□□□ -0.96
TRAF3-205ENST00000558700 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.07□□□□□ -0.96
TRAF3-205ENST00000558700 ADAM2Q99965 735 aa9.07□□□□□ -0.96
TRAF3-205ENST00000558700 RGS18Q9NS28 235 aa9.07□□□□□ -0.96
TRAF3-205ENST00000558700 NRBP2Q9NSY0 501 aa9.07□□□□□ -0.96
TRAF3-205ENST00000558700 TMEM161AQ9NX61 479 aa9.07□□□□□ -0.96
TRAF3-205ENST00000558700 TFIP11Q9UBB9 837 aaKnown RBP9.07□□□□□ -0.96
TRAF3-205ENST00000558700 SEPT9Q9UHD8 586 aaPredicted RBP9.07□□□□□ -0.96
TRAF3-205ENST00000558700 RABGEF1Q9UJ41 708 aa9.07□□□□□ -0.96
TRAF3-205ENST00000558700 PCDHB7Q9Y5E2 793 aa9.07□□□□□ -0.96
TRAF3-205ENST00000558700 CYP3A7-CYP3A51PA0A087WV96 503 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 FSD2A1L4K1 749 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 TBKBP1A7MCY6 615 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 M0R2N6 131 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 MGEA5O60502 916 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 EIF5BO60841 1220 aaKnown RBP9.06□□□□□ -0.96
TRAF3-205ENST00000558700 GPR32O75388 356 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 PSMD10O75832 226 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 ITGB1P05556 798 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 GCFC2P16383 781 aaKnown RBP9.06□□□□□ -0.96
TRAF3-205ENST00000558700 LAG3P18627 525 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 CYP3A7P24462 503 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 GATMP50440 423 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 NLRP11P59045 1033 aaKnown RBP9.06□□□□□ -0.96
TRAF3-205ENST00000558700 ANAPC15P60006 121 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 ANKRD1Q15327 319 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 NPY5RQ15761 445 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 UGCGQ16739 394 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 XKR3Q5GH77 459 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 EFCAB12Q6NXP0 572 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 NEK8Q86SG6 692 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 LRRC71Q8N4P6 559 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 LINC01465Q8N7H1 131 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 MBOAT7Q96N66 472 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 POP1Q99575 1024 aaKnown RBP9.06□□□□□ -0.96
TRAF3-205ENST00000558700 NAP1L4Q99733 375 aaKnown RBP9.06□□□□□ -0.96
TRAF3-205ENST00000558700 JPH2Q9BR39 696 aaPredicted RBP9.06□□□□□ -0.96
TRAF3-205ENST00000558700 SLKQ9H2G2 1235 aaPredicted RBP9.06□□□□□ -0.96
TRAF3-205ENST00000558700 ELAC1Q9H777 363 aaKnown RBP9.06□□□□□ -0.96
TRAF3-205ENST00000558700 ATP6V0A4Q9HBG4 840 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 ALG13Q9NP73 1137 aaKnown RBP9.06□□□□□ -0.96
TRAF3-205ENST00000558700 PRKAG3Q9UGI9 489 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 DDX25Q9UHL0 483 aaKnown RBP9.06□□□□□ -0.96
TRAF3-205ENST00000558700 ST3GAL5Q9UNP4 418 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 PLAGL2Q9UPG8 496 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 PCDHB12Q9Y5F1 795 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 XIRP2A4UGR9 3374 aa9.06□□□□□ -0.96
TRAF3-205ENST00000558700 MYO7AQ13402 2215 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 MUC3AQ02505 3323 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 DKC1O60832 514 aaKnown RBP eCLIP9.05□□□□□ -0.96
TRAF3-205ENST00000558700 CFHP08603 1231 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 DARSP14868 501 aaKnown RBP9.05□□□□□ -0.96
TRAF3-205ENST00000558700 ZSCAN20P17040 1043 aaPredicted RBP9.05□□□□□ -0.96
TRAF3-205ENST00000558700 SFPQP23246 707 aaKnown RBP eCLIP9.05□□□□□ -0.96
TRAF3-205ENST00000558700 EIF4BP23588 611 aaKnown RBP9.05□□□□□ -0.96
TRAF3-205ENST00000558700 PPM1AP35813 382 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 GPC3P51654 580 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 UBE3AQ05086 875 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 SCRN1Q12765 414 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 HYAL1Q12794 435 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 SMAD4Q13485 552 aaKnown RBP9.05□□□□□ -0.96
TRAF3-205ENST00000558700 DSC3Q14574 896 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 INF2Q27J81 1249 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 LETM2Q2VYF4 491 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 MTERF2Q49AM1 385 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 TMEM31Q5JXX7 168 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 ERICH6BQ5W0A0 696 aa9.05□□□□□ -0.96
TRAF3-205ENST00000558700 THNSL1Q8IYQ7 743 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms