RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 GFPT1Q06210 699 aaPredicted RBP14.88□□□□□ -0.03
SPG11-210ENST00000558319 POU5F1BQ06416 359 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 TRIM11Q96F44 468 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 PAWRQ96IZ0 340 aaKnown RBP14.88□□□□□ -0.03
SPG11-210ENST00000558319 ZFYVE19Q96K21 471 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 ZSCAN9O15535 394 aaPredicted RBP14.88□□□□□ -0.03
SPG11-210ENST00000558319 PJA2O43164 708 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 MAPKBP1O60336 1514 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 CYP21A2P08686 494 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 HDAC4P56524 1084 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 TRIM60Q495X7 471 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 FSCBQ5H9T9 825 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 LMBRD2Q68DH5 695 aaPredicted RBP14.88□□□□□ -0.03
SPG11-210ENST00000558319 TMEM154Q6P9G4 183 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 ACAD11Q709F0 780 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 RASSF3Q86WH2 238 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 TAGAPQ8N103 731 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 BTBD6Q96KE9 485 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 NACC1Q96RE7 527 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 ADNPQ9H2P0 1102 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 ATP11BQ9Y2G3 1177 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 POTEMA6NI47 508 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 ZBED6P86452 979 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 PRMT1Q99873 361 aaKnown RBP14.88□□□□□ -0.03
SPG11-210ENST00000558319 EMILIN3Q9NT22 766 aa14.88□□□□□ -0.03
SPG11-210ENST00000558319 SSH2Q76I76 1423 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 MFAP3LO75121 409 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 PSAPP07602 524 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 CDK8P49336 464 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 TMEM62Q0P6H9 643 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 ZNF211Q13398 564 aaPredicted RBP14.87□□□□□ -0.03
SPG11-210ENST00000558319 LRRC8EQ6NSJ5 796 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 ZNF746Q6NUN9 644 aaPredicted RBP14.87□□□□□ -0.03
SPG11-210ENST00000558319 STK17AQ9UEE5 414 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 ADCY3O60266 1144 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 IRF1P10914 325 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 SUPT20HL1Q3ZLR7 823 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 NFRKBQ6P4R8 1299 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 NSUN7Q8NE18 718 aaKnown RBP14.87□□□□□ -0.03
SPG11-210ENST00000558319 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.87□□□□□ -0.03
SPG11-210ENST00000558319 OSBP2Q969R2 916 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 ERLEC1Q96DZ1 483 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 PAGE5Q96GU1 130 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 SIK2Q9H0K1 926 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 EHD2Q9NZN4 543 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 AGRPO00253 132 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 HMBSP08397 361 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 SUSD4Q5VX71 490 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 THAP11Q96EK4 314 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 OTUD5Q96G74 571 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 FAM213AQ9BRX8 229 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 SUN2Q9UH99 717 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 TSPOAP1O95153 1857 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 SLC16A4O15374 487 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 MMP10P09238 476 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 HLFQ16534 295 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 PDIK1LQ8N165 341 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 USP17L15C9J2P7 530 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 USP17L13C9JLJ4 530 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 USP17L11C9JVI0 530 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 USP17L18D6R9N7 530 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 USP17L22D6RA61 530 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 USP17L17D6RBQ6 530 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 USP17L19D6RCP7 530 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 USP17L20D6RJB6 530 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 HSPA6P17066 643 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 USP17L24Q0WX57 530 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 EFTUD2Q15029 972 aaKnown RBP eCLIP14.87□□□□□ -0.03
SPG11-210ENST00000558319 PRAMEF18Q5VWM3 479 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 APOA5Q6Q788 366 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 USP17L6PQ6QN14 398 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 LONP2Q86WA8 852 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 IFT43Q96FT9 208 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 WRNIP1Q96S55 665 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 BHMT2Q9H2M3 363 aa14.87□□□□□ -0.03
SPG11-210ENST00000558319 MRPL47Q9HD33 250 aaKnown RBP14.87□□□□□ -0.03
SPG11-210ENST00000558319 AP1B1Q10567 949 aa14.86□□□□□ -0.03
SPG11-210ENST00000558319 LBRQ14739 615 aaKnown RBP14.86□□□□□ -0.03
SPG11-210ENST00000558319 RBBP7Q16576 425 aa14.86□□□□□ -0.03
SPG11-210ENST00000558319 NEUROG2Q9H2A3 272 aa14.86□□□□□ -0.03
SPG11-210ENST00000558319 SERPINB13Q9UIV8 391 aa14.86□□□□□ -0.03
SPG11-210ENST00000558319 PAIP2BQ9ULR5 123 aaKnown RBP14.86□□□□□ -0.03
SPG11-210ENST00000558319 XPOTO43592 962 aaKnown RBP14.86□□□□□ -0.03
SPG11-210ENST00000558319 LCP1P13796 627 aa14.86□□□□□ -0.03
SPG11-210ENST00000558319 ARFIP2P53365 341 aa14.86□□□□□ -0.03
SPG11-210ENST00000558319 ADD3Q9UEY8 706 aaKnown RBP14.86□□□□□ -0.03
SPG11-210ENST00000558319 PRPF4O43172 522 aaKnown RBP eCLIP14.86□□□□□ -0.03
SPG11-210ENST00000558319 IREB2P48200 963 aaKnown RBP14.86□□□□□ -0.03
SPG11-210ENST00000558319 ASPRV1Q53RT3 343 aa14.86□□□□□ -0.03
SPG11-210ENST00000558319 LINC00301Q8NCQ3 95 aa14.86□□□□□ -0.03
SPG11-210ENST00000558319 AURKCQ9UQB9 309 aa14.86□□□□□ -0.03
SPG11-210ENST00000558319 K7ERI5 159 aa14.86□□□□□ -0.03
SPG11-210ENST00000558319 CUL3Q13618 768 aa14.86□□□□□ -0.03
SPG11-210ENST00000558319 NLGN1Q8N2Q7 840 aa14.86□□□□□ -0.03
SPG11-210ENST00000558319 THAP9Q9H5L6 903 aa14.86□□□□□ -0.03
SPG11-210ENST00000558319 EIF2AK4Q9P2K8 1649 aaKnown RBP14.86□□□□□ -0.03
SPG11-210ENST00000558319 DFFAO00273 331 aa14.86□□□□□ -0.03
SPG11-210ENST00000558319 DPYSL4O14531 572 aa14.86□□□□□ -0.03
SPG11-210ENST00000558319 COPB2P35606 906 aa14.86□□□□□ -0.03
SPG11-210ENST00000558319 ALDH18A1P54886 795 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms