RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 LINC01599Q8WXQ3 324 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 RSPH1Q8WYR4 309 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 TNFRSF25Q93038 417 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 CEP89Q96ST8 783 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 ADAM2Q99965 735 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 INO80BQ9C086 356 aaPredicted RBP11.35□□□□□ -0.59
USP3-207ENST00000558218 CHST12Q9NRB3 414 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 VAV3Q9UKW4 847 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 LRFN2Q9ULH4 789 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 AKT3Q9Y243 479 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 GINS2Q9Y248 185 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 CDH23Q9H251 3354 aa11.35□□□□□ -0.59
USP3-207ENST00000558218 DENND3A2RUS2 1198 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 DDX11L8A8MPP1 907 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 C9IYK1 514 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 HOXA2O43364 376 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 SLC37A4O43826 429 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 MAFO75444 373 aaPredicted RBP11.34□□□□□ -0.59
USP3-207ENST00000558218 VTNP04004 478 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 ZSCAN20P17040 1043 aaPredicted RBP11.34□□□□□ -0.59
USP3-207ENST00000558218 DSC3Q14574 896 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 SAFBQ15424 915 aaKnown RBP eCLIP11.34□□□□□ -0.59
USP3-207ENST00000558218 UGCGQ16739 394 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 CSPP1Q1MSJ5 1256 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 KIZQ2M2Z5 673 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 TMEM266Q2M3C6 531 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 KRT40Q6A162 431 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 TRMT1LQ7Z2T5 733 aaKnown RBP11.34□□□□□ -0.59
USP3-207ENST00000558218 LAPTM4BQ86VI4 370 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 ZNF410Q86VK4 478 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 HAS1Q92839 578 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 GJA10Q969M2 543 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 OSMRQ99650 979 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 SH2B1Q9NRF2 756 aaPredicted RBP11.34□□□□□ -0.59
USP3-207ENST00000558218 AAASQ9NRG9 546 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 GJB4Q9NTQ9 266 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 TMEM161AQ9NX61 479 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 PCDHA12Q9UN75 941 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 TRANK1O15050 2925 aa11.34□□□□□ -0.59
USP3-207ENST00000558218 BTBD18B2RXH4 712 aa11.33□□□□□ -0.6
USP3-207ENST00000558218 EML1O00423 815 aa11.33□□□□□ -0.6
USP3-207ENST00000558218 GAS2O43903 313 aaKnown RBP11.33□□□□□ -0.6
USP3-207ENST00000558218 LARGE1O95461 756 aa11.33□□□□□ -0.6
USP3-207ENST00000558218 EOMESO95936 686 aa11.33□□□□□ -0.6
USP3-207ENST00000558218 XRCC6P12956 609 aaKnown RBP eCLIP11.33□□□□□ -0.6
USP3-207ENST00000558218 DARSP14868 501 aaKnown RBP11.33□□□□□ -0.6
USP3-207ENST00000558218 CTNNB1P35222 781 aa11.33□□□□□ -0.6
USP3-207ENST00000558218 RFC5P40937 340 aa11.33□□□□□ -0.6
USP3-207ENST00000558218 RBM25P49756 843 aaKnown RBP11.33□□□□□ -0.6
USP3-207ENST00000558218 GPC3P51654 580 aa11.33□□□□□ -0.6
USP3-207ENST00000558218 CLCN3P51790 818 aa11.33□□□□□ -0.6
USP3-207ENST00000558218 HMGN5P82970 282 aaKnown RBP11.33□□□□□ -0.6
USP3-207ENST00000558218 ORC2Q13416 577 aaPredicted RBP11.33□□□□□ -0.6
USP3-207ENST00000558218 COL19A1Q14993 1142 aa11.33□□□□□ -0.6
USP3-207ENST00000558218 PUS10Q3MIT2 529 aaKnown RBP11.33□□□□□ -0.6
USP3-207ENST00000558218 ANO5Q75V66 913 aa11.33□□□□□ -0.6
USP3-207ENST00000558218 FAM228AQ86W67 206 aa11.33□□□□□ -0.6
USP3-207ENST00000558218 BANK1Q8NDB2 785 aa11.33□□□□□ -0.6
USP3-207ENST00000558218 TRAIPQ9BWF2 469 aa11.33□□□□□ -0.6
USP3-207ENST00000558218 GCOM2Q9BZD3 368 aaPredicted RBP11.33□□□□□ -0.6
USP3-207ENST00000558218 ZSWIM4Q9H7M6 989 aa11.33□□□□□ -0.6
USP3-207ENST00000558218 CYP26B1Q9NR63 512 aa11.33□□□□□ -0.6
USP3-207ENST00000558218 DACT1Q9NYF0 836 aa11.33□□□□□ -0.6
USP3-207ENST00000558218 NLRC5Q86WI3 1866 aa11.33□□□□□ -0.6
USP3-207ENST00000558218 NCOR1O75376 2440 aa11.33□□□□□ -0.6
USP3-207ENST00000558218 A0A0U1RQF3 1178 aa11.32□□□□□ -0.6
USP3-207ENST00000558218 CARNS1A5YM72 827 aa11.32□□□□□ -0.6
USP3-207ENST00000558218 TNFRSF10AO00220 468 aa11.32□□□□□ -0.6
USP3-207ENST00000558218 ASAP2O43150 1006 aa11.32□□□□□ -0.6
USP3-207ENST00000558218 RNF40O75150 1001 aa11.32□□□□□ -0.6
USP3-207ENST00000558218 LYPLA2O95372 231 aa11.32□□□□□ -0.6
USP3-207ENST00000558218 SKIP12755 728 aa11.32□□□□□ -0.6
USP3-207ENST00000558218 UBE3AQ05086 875 aa11.32□□□□□ -0.6
USP3-207ENST00000558218 SPIRE1Q08AE8 756 aa11.32□□□□□ -0.6
USP3-207ENST00000558218 NR5A1Q13285 461 aa11.32□□□□□ -0.6
USP3-207ENST00000558218 PCBP1Q15365 356 aaKnown RBP eCLIP11.32□□□□□ -0.6
USP3-207ENST00000558218 C8orf34Q49A92 452 aa11.32□□□□□ -0.6
USP3-207ENST00000558218 MTERF2Q49AM1 385 aa11.32□□□□□ -0.6
USP3-207ENST00000558218 EARS2Q5JPH6 523 aaKnown RBP11.32□□□□□ -0.6
USP3-207ENST00000558218 DIS3L2Q8IYB7 885 aaKnown RBP11.32□□□□□ -0.6
USP3-207ENST00000558218 LRRC71Q8N4P6 559 aa11.32□□□□□ -0.6
USP3-207ENST00000558218 NEK9Q8TD19 979 aa11.32□□□□□ -0.6
USP3-207ENST00000558218 ADAMTS19Q8TE59 1207 aa11.32□□□□□ -0.6
USP3-207ENST00000558218 SLC7A3Q8WY07 619 aa11.32□□□□□ -0.6
USP3-207ENST00000558218 HSD17B14Q9BPX1 270 aa11.32□□□□□ -0.6
USP3-207ENST00000558218 FOXP1Q9H334 677 aaPredicted RBP11.32□□□□□ -0.6
USP3-207ENST00000558218 NSUN3Q9H649 340 aaKnown RBP11.32□□□□□ -0.6
USP3-207ENST00000558218 ATP6V0A4Q9HBG4 840 aa11.32□□□□□ -0.6
USP3-207ENST00000558218 SUCLA2Q9P2R7 463 aaPredicted RBP11.32□□□□□ -0.6
USP3-207ENST00000558218 PLAGL2Q9UPG8 496 aa11.32□□□□□ -0.6
USP3-207ENST00000558218 MGEA5O60502 916 aa11.31□□□□□ -0.6
USP3-207ENST00000558218 JAK2O60674 1132 aa11.31□□□□□ -0.6
USP3-207ENST00000558218 SLITRK3O94933 977 aa11.31□□□□□ -0.6
USP3-207ENST00000558218 YWHABP31946 246 aaKnown RBP11.31□□□□□ -0.6
USP3-207ENST00000558218 TFF2Q03403 129 aa11.31□□□□□ -0.6
USP3-207ENST00000558218 CALCRLQ16602 461 aa11.31□□□□□ -0.6
USP3-207ENST00000558218 LEXMQ3ZCV2 418 aa11.31□□□□□ -0.6
USP3-207ENST00000558218 PDE12Q6L8Q7 609 aaKnown RBP11.31□□□□□ -0.6
USP3-207ENST00000558218 FBXO18Q8NFZ0 1043 aa11.31□□□□□ -0.6
USP3-207ENST00000558218 TCP11Q8WWU5 503 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms