RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 MRPL14Q6P1L8 145 aaKnown RBP13.43□□□□□ -0.26
HMGB1P8-201ENST00000558211 SLC39A5Q6ZMH5 540 aa13.43□□□□□ -0.26
HMGB1P8-201ENST00000558211 USP49Q70CQ1 688 aa13.43□□□□□ -0.26
HMGB1P8-201ENST00000558211 CABP7Q86V35 215 aa13.43□□□□□ -0.26
HMGB1P8-201ENST00000558211 CATSPER3Q86XQ3 398 aa13.43□□□□□ -0.26
HMGB1P8-201ENST00000558211 C7orf31Q8N865 590 aa13.43□□□□□ -0.26
HMGB1P8-201ENST00000558211 KDF1Q8NAX2 398 aaPredicted RBP13.43□□□□□ -0.26
HMGB1P8-201ENST00000558211 EPSTI1Q96J88 318 aa13.43□□□□□ -0.26
HMGB1P8-201ENST00000558211 HSD17B14Q9BPX1 270 aa13.43□□□□□ -0.26
HMGB1P8-201ENST00000558211 SH2D3AQ9BRG2 576 aa13.43□□□□□ -0.26
HMGB1P8-201ENST00000558211 NRBP2Q9NSY0 501 aa13.43□□□□□ -0.26
HMGB1P8-201ENST00000558211 WRAP73Q9P2S5 460 aaPredicted RBP13.43□□□□□ -0.26
HMGB1P8-201ENST00000558211 HDAC6Q9UBN7 1215 aa13.43□□□□□ -0.26
HMGB1P8-201ENST00000558211 TRIP12Q14669 1992 aaPredicted RBP13.43□□□□□ -0.26
HMGB1P8-201ENST00000558211 SCN10AQ9Y5Y9 1956 aa13.43□□□□□ -0.26
HMGB1P8-201ENST00000558211 GRIN2DO15399 1336 aa13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 IGSF9BQ9UPX0 1349 aa13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 TMEM150BA6NC51 233 aa13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 HAS3O00219 553 aa13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 ZBTB39O15060 712 aa13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 DKC1O60832 514 aaKnown RBP eCLIP13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 SPATA31C1P0DKV0 1188 aa13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 SMIM10L2AP0DMW4 78 aa13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 SMIM10L2BP0DMW5 78 aa13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 COL6A1P12109 1028 aa13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 ECM1Q16610 540 aa13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 NEK9Q8TD19 979 aa13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 PIGOQ8TEQ8 1089 aa13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 CDK5RAP3Q96JB5 506 aa13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 AK8Q96MA6 479 aa13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 MMTAG2Q9BU76 263 aaKnown RBP13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 POLR3CQ9BUI4 534 aaPredicted RBP13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 PANK2Q9BZ23 570 aa13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 ZSWIM4Q9H7M6 989 aa13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 TUFT1Q9NNX1 390 aa13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 SETD4Q9NVD3 440 aa13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 KIAA1024Q9UPX6 916 aa13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 BRCA2P51587 3418 aa13.42□□□□□ -0.26
HMGB1P8-201ENST00000558211 ARVCFO00192 962 aa13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 HBP1O60381 514 aa13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 ADH1AP07327 375 aa13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 SKIP12755 728 aa13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 INSRRP14616 1297 aa13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 RPA1P27694 616 aa13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 SLC26A2P50443 739 aa13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 ZNF200P98182 395 aaPredicted RBP13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 PPFIA1Q13136 1202 aa13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 KARSQ15046 597 aaKnown RBP13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 MTERF2Q49AM1 385 aa13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 XKR3Q5GH77 459 aa13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 AXDND1Q5T1B0 1012 aaPredicted RBP13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 PLA2G4FQ68DD2 849 aa13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 C4orf19Q8IY42 314 aa13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 ATP8B4Q8TF62 1192 aa13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 TRAPPC12Q8WVT3 735 aa13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 CALML4Q96GE6 196 aa13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 FAM167AQ96KS9 214 aa13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 DDX19AQ9NUU7 478 aaKnown RBP13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 ATP11BQ9Y2G3 1177 aa13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 MORC2Q9Y6X9 1032 aaPredicted RBP13.41□□□□□ -0.26
HMGB1P8-201ENST00000558211 C17orf102A2RUQ5 167 aa13.4□□□□□ -0.26
HMGB1P8-201ENST00000558211 GOLGA6L4A6NEF3 574 aa13.4□□□□□ -0.26
HMGB1P8-201ENST00000558211 PQBP1O60828 265 aaKnown RBP13.4□□□□□ -0.26
HMGB1P8-201ENST00000558211 STBD1O95210 358 aa13.4□□□□□ -0.26
HMGB1P8-201ENST00000558211 YWHABP31946 246 aaKnown RBP13.4□□□□□ -0.26
HMGB1P8-201ENST00000558211 TXLNAP40222 546 aa13.4□□□□□ -0.26
HMGB1P8-201ENST00000558211 NPEPPSP55786 919 aa13.4□□□□□ -0.26
HMGB1P8-201ENST00000558211 GRIK4Q16099 956 aa13.4□□□□□ -0.26
HMGB1P8-201ENST00000558211 LRRC26Q2I0M4 334 aa13.4□□□□□ -0.26
HMGB1P8-201ENST00000558211 TRIM60Q495X7 471 aa13.4□□□□□ -0.26
HMGB1P8-201ENST00000558211 XKR9Q5GH70 373 aa13.4□□□□□ -0.26
HMGB1P8-201ENST00000558211 GDF6Q6KF10 455 aaPredicted RBP13.4□□□□□ -0.26
HMGB1P8-201ENST00000558211 NFRKBQ6P4R8 1299 aa13.4□□□□□ -0.26
HMGB1P8-201ENST00000558211 SHC4Q6S5L8 630 aa13.4□□□□□ -0.26
HMGB1P8-201ENST00000558211 LINC00528Q8N1L1 170 aa13.4□□□□□ -0.26
HMGB1P8-201ENST00000558211 PDILTQ8N807 584 aa13.4□□□□□ -0.26
HMGB1P8-201ENST00000558211 ZBTB10Q96DT7 871 aa13.4□□□□□ -0.26
HMGB1P8-201ENST00000558211 CCDC43Q96MW1 224 aaKnown RBP13.4□□□□□ -0.26
HMGB1P8-201ENST00000558211 PNMA5Q96PV4 448 aa13.4□□□□□ -0.26
HMGB1P8-201ENST00000558211 CCDC39Q9UFE4 941 aa13.4□□□□□ -0.26
HMGB1P8-201ENST00000558211 NOD1Q9Y239 953 aa13.4□□□□□ -0.26
HMGB1P8-201ENST00000558211 KDM3AQ9Y4C1 1321 aa13.39□□□□□ -0.27
HMGB1P8-201ENST00000558211 EVPLQ92817 2033 aa13.39□□□□□ -0.27
HMGB1P8-201ENST00000558211 E9PMD0 336 aa13.39□□□□□ -0.27
HMGB1P8-201ENST00000558211 ATP9BO43861 1147 aa13.39□□□□□ -0.27
HMGB1P8-201ENST00000558211 SSBP05455 408 aaKnown RBP eCLIP13.39□□□□□ -0.27
HMGB1P8-201ENST00000558211 RTP1P59025 263 aa13.39□□□□□ -0.27
HMGB1P8-201ENST00000558211 GRB10Q13322 594 aa13.39□□□□□ -0.27
HMGB1P8-201ENST00000558211 DHX8Q14562 1220 aaKnown RBP13.39□□□□□ -0.27
HMGB1P8-201ENST00000558211 ZNF484Q5JVG2 852 aa13.39□□□□□ -0.27
HMGB1P8-201ENST00000558211 ADALQ6DHV7 355 aa13.39□□□□□ -0.27
HMGB1P8-201ENST00000558211 ANO5Q75V66 913 aa13.39□□□□□ -0.27
HMGB1P8-201ENST00000558211 OTUD6AQ7L8S5 288 aa13.39□□□□□ -0.27
HMGB1P8-201ENST00000558211 UBE2Q1Q7Z7E8 422 aa13.39□□□□□ -0.27
HMGB1P8-201ENST00000558211 LMBR1Q8WVP7 490 aa13.39□□□□□ -0.27
HMGB1P8-201ENST00000558211 CEP170P1Q96L14 293 aa13.39□□□□□ -0.27
HMGB1P8-201ENST00000558211 NACC1Q96RE7 527 aa13.39□□□□□ -0.27
HMGB1P8-201ENST00000558211 CCSER1Q9C0I3 900 aa13.39□□□□□ -0.27
HMGB1P8-201ENST00000558211 TRPV6Q9H1D0 765 aa13.39□□□□□ -0.27
HMGB1P8-201ENST00000558211 TRMT13Q9NUP7 481 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms