RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 RBM38Q9H0Z9 239 aaKnown RBP11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 MBIPQ9NS73 344 aa11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 COQ6Q9Y2Z9 468 aa11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 RBM8AQ9Y5S9 174 aaKnown RBP11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 DUSP10Q9Y6W6 482 aa11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 RPL17P18621 184 aaKnown RBP11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 MMP13P45452 471 aa11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 EIF2B2P49770 351 aaKnown RBP11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 LPIN1Q14693 890 aa11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 PHKG1Q16816 387 aa11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 KLHDC10Q6PID8 442 aa11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 BLOC1S2Q6QNY1 142 aa11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 ALDH16A1Q8IZ83 802 aa11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 VPS52Q8N1B4 723 aa11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 EXD1Q8NHP7 514 aa11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 DPF3Q92784 378 aa11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 C1orf74Q96LT6 269 aa11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 PRMT1Q99873 361 aaKnown RBP11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 EXOC7Q9UPT5 735 aa11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 MAP3K19Q56UN5 1328 aa11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 ARAP3Q8WWN8 1544 aa11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 ZFYVE9O95405 1425 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 ZFYP08048 801 aaPredicted RBP11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 ATICP31939 592 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 CHKAP35790 457 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 CCDC14Q49A88 953 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 LURAP1LQ8IV03 231 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 COX4I2Q96KJ9 171 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 SEMA4AQ9H3S1 761 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 TCP11L1Q9NUJ3 509 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 TELO2Q9Y4R8 837 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 WNK3Q9BYP7 1800 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 HGSO14964 777 aaPredicted RBP11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 YEATS4O95619 227 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 ABCB1P08183 1280 aaPredicted RBP11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 CETN2P41208 172 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 GSSP48637 474 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 B2MP61769 119 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 ZBTB17Q13105 803 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 GRM2Q14416 872 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 OTUD7BQ6GQQ9 843 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 USP43Q70EL4 1123 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 CROCCP3Q8IVE0 287 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 CPSF7Q8N684 471 aaKnown RBP11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 NPLOC4Q8TAT6 608 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 THAP9Q9H5L6 903 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 POLR3EQ9NVU0 708 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 RPL26L1Q9UNX3 145 aaKnown RBP11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 VWDEQ8N2E2 1590 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 ENPP3O14638 875 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 ZNF862O60290 1169 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 TBX10O75333 385 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 CTDNEP1O95476 244 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 ENO2P09104 434 aaPredicted RBP11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 PSMA5P28066 241 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 GBE1Q04446 702 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 HSPA14Q0VDF9 509 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 NATD1Q8N6N6 113 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 NSRP1Q9H0G5 558 aaKnown RBP11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 CCDC177Q9NQR7 707 aaPredicted RBP11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 ZBTB21Q9ULJ3 1066 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 ASXL2Q76L83 1435 aa11.82□□□□□ -0.52
SEMA4B-204ENST00000558065 FUCA1P04066 466 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 PCP11498 1178 aaKnown RBP11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 RPS3AP61247 264 aaKnown RBP11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 STK38Q15208 465 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 ZNF746Q6NUN9 644 aaPredicted RBP11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 NFRKBQ6P4R8 1299 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 UNC13DQ70J99 1090 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 SDCCAG3Q96C92 435 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 PRICKLE1Q96MT3 831 aaPredicted RBP11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 CTRCQ99895 268 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 TBC1D10AQ9BXI6 508 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 EHD1Q9H4M9 534 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 KLHL3Q9UH77 587 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 PPP1R9AQ9ULJ8 1098 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 ANGEL1Q9UNK9 670 aaKnown RBP11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 PCDHGA3Q9Y5H0 932 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 AP3B1O00203 1094 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 HAT1O14929 419 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 SUN1O94901 812 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 ANXA13P27216 316 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 EPHB2P29323 1055 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 SYKP43405 635 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 KPNA1P52294 538 aaPredicted RBP11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 SLC34A1Q06495 639 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 RRS1Q15050 365 aaKnown RBP11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 SF3B4Q15427 424 aaKnown RBP eCLIP11.81□□□□□ -0.521e-8■■■■□ 25.3
SEMA4B-204ENST00000558065 C15orf59Q2T9L4 293 aaPredicted RBP11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 ZCCHC8Q6NZY4 707 aaKnown RBP11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 PROSER2Q86WR7 435 aaPredicted RBP11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 PEX13Q92968 403 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 ARMC7Q9H6L4 198 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 SIAEQ9HAT2 523 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 IL1RAPL2Q9NP60 686 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 PIH1D3Q9NQM4 214 aaKnown RBP11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 SALL4Q9UJQ4 1053 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 TMCC3Q9ULS5 477 aa11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 NOSIPQ9Y314 301 aaKnown RBP11.81□□□□□ -0.52
SEMA4B-204ENST00000558065 CARMIL3Q8ND23 1372 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms