RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 PIGOQ8TEQ8 1089 aa18.47■□□□□ 0.55
VSX1-207ENST00000557285 TBC1D32Q96NH3 1257 aa18.47■□□□□ 0.55
VSX1-207ENST00000557285 MTRQ99707 1265 aa18.47■□□□□ 0.55
VSX1-207ENST00000557285 DHX33Q9H6R0 707 aaKnown RBP18.47■□□□□ 0.55
VSX1-207ENST00000557285 RNF216Q9NWF9 866 aaPredicted RBP18.47■□□□□ 0.55
VSX1-207ENST00000557285 NOL7Q9UMY1 257 aaKnown RBP18.47■□□□□ 0.55
VSX1-207ENST00000557285 COG5Q9UP83 839 aa18.47■□□□□ 0.55
VSX1-207ENST00000557285 PIN4Q9Y237 131 aaKnown RBP18.47■□□□□ 0.55
VSX1-207ENST00000557285 FAM189BP81408 668 aa18.46■□□□□ 0.55
VSX1-207ENST00000557285 LAMTOR4Q0VGL1 99 aa18.46■□□□□ 0.55
VSX1-207ENST00000557285 TWF2Q6IBS0 349 aaKnown RBP18.46■□□□□ 0.55
VSX1-207ENST00000557285 ZNF410Q86VK4 478 aa18.46■□□□□ 0.55
VSX1-207ENST00000557285 ECHDC2Q86YB7 292 aa18.46■□□□□ 0.55
VSX1-207ENST00000557285 KLHL23Q8NBE8 558 aa18.46■□□□□ 0.55
VSX1-207ENST00000557285 NEK9Q8TD19 979 aa18.46■□□□□ 0.55
VSX1-207ENST00000557285 NECAB3Q96P71 396 aaPredicted RBP18.46■□□□□ 0.55
VSX1-207ENST00000557285 HSD17B14Q9BPX1 270 aa18.46■□□□□ 0.55
VSX1-207ENST00000557285 PLAGL2Q9UPG8 496 aa18.46■□□□□ 0.55
VSX1-207ENST00000557285 PLXNA4Q9HCM2 1894 aa18.46■□□□□ 0.54
VSX1-207ENST00000557285 ITGB1P05556 798 aa18.45■□□□□ 0.54
VSX1-207ENST00000557285 KCNA5P22460 613 aa18.45■□□□□ 0.54
VSX1-207ENST00000557285 MAEAQ7L5Y9 396 aa18.45■□□□□ 0.54
VSX1-207ENST00000557285 EXOC8Q8IYI6 725 aa18.45■□□□□ 0.54
VSX1-207ENST00000557285 TCP11Q8WWU5 503 aa18.45■□□□□ 0.54
VSX1-207ENST00000557285 PLVAPQ9BX97 442 aa18.45■□□□□ 0.54
VSX1-207ENST00000557285 INO80BQ9C086 356 aaPredicted RBP18.45■□□□□ 0.54
VSX1-207ENST00000557285 NSUN3Q9H649 340 aaKnown RBP18.45■□□□□ 0.54
VSX1-207ENST00000557285 ELAC1Q9H777 363 aaKnown RBP18.45■□□□□ 0.54
VSX1-207ENST00000557285 UBE2ZQ9H832 354 aaPredicted RBP18.45■□□□□ 0.54
VSX1-207ENST00000557285 TYW1Q9NV66 732 aaKnown RBP18.45■□□□□ 0.54
VSX1-207ENST00000557285 DACT1Q9NYF0 836 aa18.45■□□□□ 0.54
VSX1-207ENST00000557285 KIF3AQ9Y496 699 aa18.45■□□□□ 0.54
VSX1-207ENST00000557285 PPME1Q9Y570 386 aa18.45■□□□□ 0.54
VSX1-207ENST00000557285 USO1O60763 962 aaKnown RBP18.44■□□□□ 0.54
VSX1-207ENST00000557285 DNAJB1P25685 340 aa18.44■□□□□ 0.54
VSX1-207ENST00000557285 GJB2P29033 226 aa18.44■□□□□ 0.54
VSX1-207ENST00000557285 POTEGQ6S5H5 508 aa18.44■□□□□ 0.54
VSX1-207ENST00000557285 FERMT3Q86UX7 667 aa18.44■□□□□ 0.54
VSX1-207ENST00000557285 THNSL1Q8IYQ7 743 aa18.44■□□□□ 0.54
VSX1-207ENST00000557285 RNF149Q8NC42 400 aa18.44■□□□□ 0.54
VSX1-207ENST00000557285 HELQQ8TDG4 1101 aa18.44■□□□□ 0.54
VSX1-207ENST00000557285 UHRF1Q96T88 793 aaPredicted RBP18.44■□□□□ 0.54
VSX1-207ENST00000557285 IGFLR1Q9H665 355 aa18.44■□□□□ 0.54
VSX1-207ENST00000557285 IFT122Q9HBG6 1241 aa18.44■□□□□ 0.54
VSX1-207ENST00000557285 ANKEF1Q9NU02 776 aa18.44■□□□□ 0.54
VSX1-207ENST00000557285 RNF19AQ9NV58 838 aa18.44■□□□□ 0.54
VSX1-207ENST00000557285 PCDHB12Q9Y5F1 795 aa18.44■□□□□ 0.54
VSX1-207ENST00000557285 H3BQV1 296 aa18.43■□□□□ 0.54
VSX1-207ENST00000557285 MED24O75448 989 aa18.43■□□□□ 0.54
VSX1-207ENST00000557285 SPATA31C1P0DKV0 1188 aa18.43■□□□□ 0.54
VSX1-207ENST00000557285 PBX3P40426 434 aa18.43■□□□□ 0.54
VSX1-207ENST00000557285 RARRES1P49788 294 aa18.43■□□□□ 0.54
VSX1-207ENST00000557285 CLLU1OSQ5K130 101 aa18.43■□□□□ 0.54
VSX1-207ENST00000557285 FAM43BQ6ZT52 329 aaPredicted RBP18.43■□□□□ 0.54
VSX1-207ENST00000557285 CATSPER3Q86XQ3 398 aa18.43■□□□□ 0.54
VSX1-207ENST00000557285 COLGALT1Q8NBJ5 622 aa18.43■□□□□ 0.54
VSX1-207ENST00000557285 ERMNQ8TAM6 284 aa18.43■□□□□ 0.54
VSX1-207ENST00000557285 POF1BQ8WVV4 589 aa18.43■□□□□ 0.54
VSX1-207ENST00000557285 LPPQ93052 612 aa18.43■□□□□ 0.54
VSX1-207ENST00000557285 CASD1Q96PB1 797 aa18.43■□□□□ 0.54
VSX1-207ENST00000557285 TMEM117Q9H0C3 514 aa18.43■□□□□ 0.54
VSX1-207ENST00000557285 LMAN2LQ9H0V9 348 aa18.43■□□□□ 0.54
VSX1-207ENST00000557285 MINDY3Q9H8M7 445 aa18.43■□□□□ 0.54
VSX1-207ENST00000557285 XPNPEP1Q9NQW7 623 aa18.43■□□□□ 0.54
VSX1-207ENST00000557285 AAASQ9NRG9 546 aa18.43■□□□□ 0.54
VSX1-207ENST00000557285 PCDHB6Q9Y5E3 794 aa18.43■□□□□ 0.54
VSX1-207ENST00000557285 TTC28Q96AY4 2481 aa18.42■□□□□ 0.54
VSX1-207ENST00000557285 A0A0U1RQF3 1178 aa18.42■□□□□ 0.54
VSX1-207ENST00000557285 H3BQ06 376 aaPredicted RBP18.42■□□□□ 0.54
VSX1-207ENST00000557285 HOXA2O43364 376 aa18.42■□□□□ 0.54
VSX1-207ENST00000557285 GAS2O43903 313 aaKnown RBP18.42■□□□□ 0.54
VSX1-207ENST00000557285 LYPLA2O95372 231 aa18.42■□□□□ 0.54
VSX1-207ENST00000557285 BMP1P13497 986 aa18.42■□□□□ 0.54
VSX1-207ENST00000557285 ATF7P17544 494 aaPredicted RBP18.42■□□□□ 0.54
VSX1-207ENST00000557285 U2AF2P26368 475 aaKnown RBP eCLIP18.42■□□□□ 0.54
VSX1-207ENST00000557285 PHKA2P46019 1235 aa18.42■□□□□ 0.54
VSX1-207ENST00000557285 TRAPPC10P48553 1259 aa18.42■□□□□ 0.54
VSX1-207ENST00000557285 TOB1P50616 345 aaPredicted RBP18.42■□□□□ 0.54
VSX1-207ENST00000557285 LRRC55Q6ZSA7 311 aa18.42■□□□□ 0.54
VSX1-207ENST00000557285 SPPL3Q8TCT6 385 aa18.42■□□□□ 0.54
VSX1-207ENST00000557285 ASAP3Q8TDY4 903 aa18.42■□□□□ 0.54
VSX1-207ENST00000557285 P2RX5Q93086 422 aa18.42■□□□□ 0.54
VSX1-207ENST00000557285 CWH43Q9H720 699 aa18.42■□□□□ 0.54
VSX1-207ENST00000557285 CHST12Q9NRB3 414 aa18.42■□□□□ 0.54
VSX1-207ENST00000557285 CLDND1Q9NY35 253 aa18.42■□□□□ 0.54
VSX1-207ENST00000557285 SMC3Q9UQE7 1217 aa18.42■□□□□ 0.54
VSX1-207ENST00000557285 INPP5FQ9Y2H2 1132 aa18.42■□□□□ 0.54
VSX1-207ENST00000557285 PCDHGC5Q9Y5F6 944 aa18.42■□□□□ 0.54
VSX1-207ENST00000557285 DGAT1O75907 488 aa18.41■□□□□ 0.54
VSX1-207ENST00000557285 GTF2F1P35269 517 aaKnown RBP eCLIP18.41■□□□□ 0.54
VSX1-207ENST00000557285 IRS1P35568 1242 aa18.41■□□□□ 0.54
VSX1-207ENST00000557285 MCM2P49736 904 aa18.41■□□□□ 0.54
VSX1-207ENST00000557285 PTGDRQ13258 359 aa18.41■□□□□ 0.54
VSX1-207ENST00000557285 ORC2Q13416 577 aaPredicted RBP18.41■□□□□ 0.54
VSX1-207ENST00000557285 CAMK1Q14012 370 aa18.41■□□□□ 0.54
VSX1-207ENST00000557285 NAALADL2Q58DX5 795 aa18.41■□□□□ 0.54
VSX1-207ENST00000557285 SRGAP1Q7Z6B7 1085 aa18.41■□□□□ 0.54
VSX1-207ENST00000557285 LRRC43Q8N309 656 aa18.41■□□□□ 0.54
VSX1-207ENST00000557285 POLR3FQ9H1D9 316 aaPredicted RBP18.41■□□□□ 0.54
VSX1-207ENST00000557285 TUFT1Q9NNX1 390 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms