RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 LETMD1Q6P1Q0 360 aa7.08□□□□□ -1.28
FOXN3-215ENST00000557261 PNMA8AQ86V59 439 aaPredicted RBP7.08□□□□□ -1.28
FOXN3-215ENST00000557261 CRACR2BQ8N4Y2 399 aaPredicted RBP7.08□□□□□ -1.28
FOXN3-215ENST00000557261 NPLOC4Q8TAT6 608 aa7.08□□□□□ -1.28
FOXN3-215ENST00000557261 EDARADDQ8WWZ3 215 aa7.08□□□□□ -1.28
FOXN3-215ENST00000557261 STRBPQ96SI9 672 aaKnown RBP7.08□□□□□ -1.28
FOXN3-215ENST00000557261 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.08□□□□□ -1.28
FOXN3-215ENST00000557261 PDGFDQ9GZP0 370 aaPredicted RBP7.08□□□□□ -1.28
FOXN3-215ENST00000557261 PPARGC1AQ9UBK2 798 aaKnown RBP7.08□□□□□ -1.28
FOXN3-215ENST00000557261 MKL2Q9ULH7 1088 aa7.08□□□□□ -1.28
FOXN3-215ENST00000557261 DIS3Q9Y2L1 958 aaKnown RBP7.08□□□□□ -1.28
FOXN3-215ENST00000557261 LAMA4Q16363 1823 aa7.08□□□□□ -1.28
FOXN3-215ENST00000557261 PTPDC1A2A3K4 754 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 GAS7O60861 476 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 LRIG2O94898 1065 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 ZRANB2O95218 330 aaKnown RBP eCLIP7.07□□□□□ -1.28
FOXN3-215ENST00000557261 PDE8BO95263 885 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 RBP3P10745 1247 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 GYS1P13807 737 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 NID1P14543 1247 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 AMPD1P23109 780 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 CHMLP26374 656 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 IGHMBP2P38935 993 aaKnown RBP7.07□□□□□ -1.28
FOXN3-215ENST00000557261 CTSKP43235 329 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 ASPAP45381 313 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 RECQLP46063 649 aaPredicted RBP7.07□□□□□ -1.28
FOXN3-215ENST00000557261 DNM2P50570 870 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 RNF4P78317 190 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 SOX4Q06945 474 aaPredicted RBP7.07□□□□□ -1.28
FOXN3-215ENST00000557261 GBX1Q14549 363 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 PUM3Q15397 648 aaKnown RBP7.07□□□□□ -1.28
FOXN3-215ENST00000557261 LONRF3Q496Y0 759 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 CRY2Q49AN0 593 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 HP1BP3Q5SSJ5 553 aaPredicted RBP7.07□□□□□ -1.28
FOXN3-215ENST00000557261 LDHAL6AQ6ZMR3 332 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 OVCH1Q7RTY7 1134 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 NBPF5PQ86XG9 351 aaPredicted RBP7.07□□□□□ -1.28
FOXN3-215ENST00000557261 SMYD4Q8IYR2 804 aaPredicted RBP7.07□□□□□ -1.28
FOXN3-215ENST00000557261 CISD2Q8N5K1 135 aaKnown RBP7.07□□□□□ -1.28
FOXN3-215ENST00000557261 KLHDC4Q8TBB5 520 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 CCDC140Q96MF4 163 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 SYT17Q9BSW7 474 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 SIL1Q9H173 461 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 PIDD1Q9HB75 910 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 OXSMQ9NWU1 459 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 B4GALT6Q9UBX8 382 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 DNM3Q9UQ16 869 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 MED23Q9ULK4 1368 aa7.07□□□□□ -1.28
FOXN3-215ENST00000557261 COL4A1P02462 1669 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 PDS5AQ29RF7 1337 aaKnown RBP7.06□□□□□ -1.28
FOXN3-215ENST00000557261 A0A1B0GUL7 405 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 KLRG2A4D1S0 409 aaPredicted RBP7.06□□□□□ -1.28
FOXN3-215ENST00000557261 PMM2O15305 246 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 PRAMEF1O95521 474 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 CPP00450 1065 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 PROCP04070 461 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 IFNGR1P15260 489 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 FGFR2P21802 821 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 TM4SF1P30408 202 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 GPR85P60893 370 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 PICALMQ13492 652 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 LRRC32Q14392 662 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 ZNF267Q14586 743 aaPredicted RBP7.06□□□□□ -1.28
FOXN3-215ENST00000557261 NFIXQ14938 502 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 ZRSR2Q15696 482 aaKnown RBP7.06□□□□□ -1.28
FOXN3-215ENST00000557261 LRRC24Q50LG9 513 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 TMEM240Q5SV17 173 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 ACBD5Q5T8D3 534 aaPredicted RBP7.06□□□□□ -1.28
FOXN3-215ENST00000557261 FSTL4Q6MZW2 842 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 CRTC3Q6UUV7 619 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 AMIGO3Q86WK7 504 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 IFNL3Q8IZI9 196 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 CNBD1Q8NA66 436 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 KCT2Q8NC54 265 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 CHST14Q8NCH0 376 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 C2CD4AQ8NCU7 369 aaPredicted RBP7.06□□□□□ -1.28
FOXN3-215ENST00000557261 RUFY2Q8WXA3 655 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 LPIN2Q92539 896 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 SLC5A5Q92911 643 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 HSPBAP1Q96EW2 488 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 DSCC1Q9BVC3 393 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 C22orf23Q9BZE7 217 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 GSX1Q9H4S2 264 aaPredicted RBP7.06□□□□□ -1.28
FOXN3-215ENST00000557261 TOPORSQ9NS56 1045 aaPredicted RBP7.06□□□□□ -1.28
FOXN3-215ENST00000557261 SRP68Q9UHB9 627 aaKnown RBP7.06□□□□□ -1.28
FOXN3-215ENST00000557261 PNMA8BQ9ULN7 279 aaPredicted RBP7.06□□□□□ -1.28
FOXN3-215ENST00000557261 ZKSCAN5Q9Y2L8 839 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 GIT1Q9Y2X7 761 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 TAF1P21675 1872 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 CCDC88AQ3V6T2 1871 aa7.06□□□□□ -1.28
FOXN3-215ENST00000557261 GOLGB1Q14789 3259 aaKnown RBP7.05□□□□□ -1.28
FOXN3-215ENST00000557261 ZNF804BA4D1E1 1349 aa7.05□□□□□ -1.28
FOXN3-215ENST00000557261 SGSM2O43147 1006 aa7.05□□□□□ -1.28
FOXN3-215ENST00000557261 DYNC1LI2O43237 492 aaPredicted RBP7.05□□□□□ -1.28
FOXN3-215ENST00000557261 XPOTO43592 962 aaKnown RBP7.05□□□□□ -1.28
FOXN3-215ENST00000557261 IL33O95760 270 aa7.05□□□□□ -1.28
FOXN3-215ENST00000557261 CD3EP07766 207 aa7.05□□□□□ -1.28
FOXN3-215ENST00000557261 FXR1P51114 621 aaKnown RBP eCLIP7.05□□□□□ -1.28
FOXN3-215ENST00000557261 KPNA1P52294 538 aaPredicted RBP7.05□□□□□ -1.28
FOXN3-215ENST00000557261 ST5P78524 1137 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms