RNA–Protein interactions for RNA: ENST00000556984.5

RBM23-225, Transcript of RNA binding motif protein 23, human

TSL 4

Gene RBM23, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-225	ENST00000556984	PTPRO	Q16827	1216 aa		13.66	□□□□□ -0.22
RBM23-225	ENST00000556984	CATSPER3	Q86XQ3	398 aa		13.66	□□□□□ -0.22
RBM23-225	ENST00000556984	EXOC8	Q8IYI6	725 aa		13.66	□□□□□ -0.22
RBM23-225	ENST00000556984	RNF169	Q8NCN4	708 aa		13.66	□□□□□ -0.22
RBM23-225	ENST00000556984	NEK9	Q8TD19	979 aa		13.66	□□□□□ -0.22
RBM23-225	ENST00000556984	PSPC1	Q8WXF1	523 aa	Known RBP	13.66	□□□□□ -0.22
RBM23-225	ENST00000556984	HLA-C	Q95604	372 aa		13.66	□□□□□ -0.22
RBM23-225	ENST00000556984	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.66	□□□□□ -0.22
RBM23-225	ENST00000556984	MINDY3	Q9H8M7	445 aa		13.66	□□□□□ -0.22
RBM23-225	ENST00000556984	ANKEF1	Q9NU02	776 aa		13.66	□□□□□ -0.22
RBM23-225	ENST00000556984	TYW1	Q9NV66	732 aa	Known RBP	13.66	□□□□□ -0.22
RBM23-225	ENST00000556984	RNF216	Q9NWF9	866 aa	Predicted RBP	13.66	□□□□□ -0.22
RBM23-225	ENST00000556984	COG5	Q9UP83	839 aa		13.66	□□□□□ -0.22
RBM23-225	ENST00000556984	PLAGL2	Q9UPG8	496 aa		13.66	□□□□□ -0.22
RBM23-225	ENST00000556984	PCDHB6	Q9Y5E3	794 aa		13.66	□□□□□ -0.22
RBM23-225	ENST00000556984		A0A0U1RQF3	1178 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	CSPG5	O95196	566 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	ITGB1	P05556	798 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	BMP1	P13497	986 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	DNAJB1	P25685	340 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	TRAPPC10	P48553	1259 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	MCM2	P49736	904 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	RARRES1	P49788	294 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	ORC2	Q13416	577 aa	Predicted RBP	13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	CAMK1	Q14012	370 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	TCEAL5	Q5H9L2	206 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	MCTP1	Q6DN14	999 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	LRRC55	Q6ZSA7	311 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	CATSPER4	Q7RTX7	472 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	ZNF598	Q86UK7	904 aa	Known RBP	13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	FERMT3	Q86UX7	667 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	KLHL23	Q8NBE8	558 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	IL27	Q8NEV9	243 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	SPPL3	Q8TCT6	385 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	P2RX5	Q93086	422 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	CASD1	Q96PB1	797 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	MTR	Q99707	1265 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	PLVAP	Q9BX97	442 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	BACH2	Q9BYV9	841 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	INO80B	Q9C086	356 aa	Predicted RBP	13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	CWH43	Q9H720	699 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	CHST12	Q9NRB3	414 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	NOL7	Q9UMY1	257 aa	Known RBP	13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	PLXNA4	Q9HCM2	1894 aa		13.65	□□□□□ -0.22
RBM23-225	ENST00000556984	XIRP2	A4UGR9	3374 aa		13.64	□□□□□ -0.23
RBM23-225	ENST00000556984	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.64	□□□□□ -0.23
RBM23-225	ENST00000556984	ASAP2	O43150	1006 aa		13.64	□□□□□ -0.23
RBM23-225	ENST00000556984	XRCC6	P12956	609 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
RBM23-225	ENST00000556984	ATF7	P17544	494 aa	Predicted RBP	13.64	□□□□□ -0.23
RBM23-225	ENST00000556984	SFPQ	P23246	707 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
RBM23-225	ENST00000556984	PTGDR	Q13258	359 aa		13.64	□□□□□ -0.23
RBM23-225	ENST00000556984	LONRF3	Q496Y0	759 aa		13.64	□□□□□ -0.23
RBM23-225	ENST00000556984	CLLU1OS	Q5K130	101 aa		13.64	□□□□□ -0.23
RBM23-225	ENST00000556984	SPOUT1	Q5T280	376 aa	Known RBP	13.64	□□□□□ -0.23
RBM23-225	ENST00000556984	RNF149	Q8NC42	400 aa		13.64	□□□□□ -0.23
RBM23-225	ENST00000556984	TCP11	Q8WWU5	503 aa		13.64	□□□□□ -0.23
RBM23-225	ENST00000556984	SYMPK	Q92797	1274 aa	Known RBP	13.64	□□□□□ -0.23
RBM23-225	ENST00000556984	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.64	□□□□□ -0.23
RBM23-225	ENST00000556984	TMEM117	Q9H0C3	514 aa		13.64	□□□□□ -0.23
RBM23-225	ENST00000556984	LMAN2L	Q9H0V9	348 aa		13.64	□□□□□ -0.23
RBM23-225	ENST00000556984	TUFT1	Q9NNX1	390 aa		13.64	□□□□□ -0.23
RBM23-225	ENST00000556984	DACT1	Q9NYF0	836 aa		13.64	□□□□□ -0.23
RBM23-225	ENST00000556984	PIN4	Q9Y237	131 aa	Known RBP	13.64	□□□□□ -0.23
RBM23-225	ENST00000556984	KIF3A	Q9Y496	699 aa		13.64	□□□□□ -0.23
RBM23-225	ENST00000556984	TTC28	Q96AY4	2481 aa		13.64	□□□□□ -0.23
RBM23-225	ENST00000556984	GAS2	O43903	313 aa	Known RBP	13.63	□□□□□ -0.23
RBM23-225	ENST00000556984	DGAT1	O75907	488 aa		13.63	□□□□□ -0.23
RBM23-225	ENST00000556984	EOMES	O95936	686 aa		13.63	□□□□□ -0.23
RBM23-225	ENST00000556984	ARL2	P36404	184 aa		13.63	□□□□□ -0.23
RBM23-225	ENST00000556984	PHKA2	P46019	1235 aa		13.63	□□□□□ -0.23
RBM23-225	ENST00000556984	IL17A	Q16552	155 aa		13.63	□□□□□ -0.23
RBM23-225	ENST00000556984	ECM1	Q16610	540 aa		13.63	□□□□□ -0.23
RBM23-225	ENST00000556984	TIGD5	Q53EQ6	642 aa		13.63	□□□□□ -0.23
RBM23-225	ENST00000556984	NAALADL2	Q58DX5	795 aa		13.63	□□□□□ -0.23
RBM23-225	ENST00000556984	TWF2	Q6IBS0	349 aa	Known RBP	13.63	□□□□□ -0.23
RBM23-225	ENST00000556984	POTEG	Q6S5H5	508 aa		13.63	□□□□□ -0.23
RBM23-225	ENST00000556984	MAEA	Q7L5Y9	396 aa		13.63	□□□□□ -0.23
RBM23-225	ENST00000556984	SRGAP1	Q7Z6B7	1085 aa		13.63	□□□□□ -0.23
RBM23-225	ENST00000556984	HELQ	Q8TDG4	1101 aa		13.63	□□□□□ -0.23
RBM23-225	ENST00000556984	ASAP3	Q8TDY4	903 aa		13.63	□□□□□ -0.23
RBM23-225	ENST00000556984	POF1B	Q8WVV4	589 aa		13.63	□□□□□ -0.23
RBM23-225	ENST00000556984	LPP	Q93052	612 aa		13.63	□□□□□ -0.23
RBM23-225	ENST00000556984	NSUN3	Q9H649	340 aa	Known RBP	13.63	□□□□□ -0.23
RBM23-225	ENST00000556984	UBE2Z	Q9H832	354 aa	Predicted RBP	13.63	□□□□□ -0.23
RBM23-225	ENST00000556984	SMC3	Q9UQE7	1217 aa		13.63	□□□□□ -0.23
RBM23-225	ENST00000556984	MEIS3P2	A8K0S8	358 aa		13.62	□□□□□ -0.23
RBM23-225	ENST00000556984		H3BQV1	296 aa		13.62	□□□□□ -0.23
RBM23-225	ENST00000556984	USO1	O60763	962 aa	Known RBP	13.62	□□□□□ -0.23
RBM23-225	ENST00000556984	RPA1	P27694	616 aa		13.62	□□□□□ -0.23
RBM23-225	ENST00000556984	HOXA11	P31270	313 aa	Predicted RBP	13.62	□□□□□ -0.23
RBM23-225	ENST00000556984	IRS1	P35568	1242 aa		13.62	□□□□□ -0.23
RBM23-225	ENST00000556984	FXR2	P51116	673 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
RBM23-225	ENST00000556984	CAPS	Q13938	189 aa		13.62	□□□□□ -0.23
RBM23-225	ENST00000556984	AAK1	Q2M2I8	961 aa		13.62	□□□□□ -0.23
RBM23-225	ENST00000556984	COLGALT1	Q8NBJ5	622 aa		13.62	□□□□□ -0.23
RBM23-225	ENST00000556984	ADAMTS19	Q8TE59	1207 aa		13.62	□□□□□ -0.23
RBM23-225	ENST00000556984	CCDC43	Q96MW1	224 aa	Known RBP	13.62	□□□□□ -0.23
RBM23-225	ENST00000556984	NECAB3	Q96P71	396 aa	Predicted RBP	13.62	□□□□□ -0.23
RBM23-225	ENST00000556984	NACC1	Q96RE7	527 aa		13.62	□□□□□ -0.23
RBM23-225	ENST00000556984	TRAIP	Q9BWF2	469 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms