RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 PUF60Q9UHX1 559 aaKnown RBP14.38□□□□□ -0.11
PSEN1-219ENST00000556951 SMC3Q9UQE7 1217 aa14.38□□□□□ -0.11
PSEN1-219ENST00000556951 ITPR1Q14643 2758 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 KLF18A0A0U1RQI7 1052 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 C2orf71A6NGG8 1288 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 CYSRT1A8MQ03 144 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 ZBTB42B2RXF5 422 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 KINO60870 393 aaKnown RBP14.37□□□□□ -0.11
PSEN1-219ENST00000556951 CLASP2O75122 1294 aaKnown RBP14.37□□□□□ -0.11
PSEN1-219ENST00000556951 SRGAP2BP0DMP2 458 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 NUCB2P80303 420 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 ITIH3Q06033 890 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 STK3Q13188 491 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 WTAPQ15007 396 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 UBE2SQ16763 222 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 TPRNQ4KMQ1 711 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 FAM228AQ86W67 206 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 SRBD1Q8N5C6 995 aaKnown RBP14.37□□□□□ -0.11
PSEN1-219ENST00000556951 C12orf76Q8N812 135 aaPredicted RBP14.37□□□□□ -0.11
PSEN1-219ENST00000556951 CASP10Q92851 521 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 RRP36Q96EU6 259 aaKnown RBP14.37□□□□□ -0.11
PSEN1-219ENST00000556951 MAP3K14Q99558 947 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 TMEM117Q9H0C3 514 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 AZI2Q9H6S1 392 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 PSTPIP2Q9H939 334 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 ATP6V0A4Q9HBG4 840 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 LY9Q9HBG7 655 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 JPH1Q9HDC5 661 aaPredicted RBP14.37□□□□□ -0.11
PSEN1-219ENST00000556951 ENTPD7Q9NQZ7 604 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 BRPF3Q9ULD4 1205 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 PCDHA6Q9UN73 950 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 PCDHA8Q9Y5H6 950 aa14.37□□□□□ -0.11
PSEN1-219ENST00000556951 IGF2RP11717 2491 aa14.36□□□□□ -0.11
PSEN1-219ENST00000556951 DENND3A2RUS2 1198 aa14.36□□□□□ -0.11
PSEN1-219ENST00000556951 PLEKHA8P1O95397 391 aa14.36□□□□□ -0.11
PSEN1-219ENST00000556951 ATP4AP20648 1035 aa14.36□□□□□ -0.11
PSEN1-219ENST00000556951 TGM1P22735 817 aa14.36□□□□□ -0.11
PSEN1-219ENST00000556951 ST3GAL1Q11201 340 aa14.36□□□□□ -0.11
PSEN1-219ENST00000556951 ITGB3BPQ13352 177 aaPredicted RBP14.36□□□□□ -0.11
PSEN1-219ENST00000556951 SYNE3Q6ZMZ3 975 aa14.36□□□□□ -0.11
PSEN1-219ENST00000556951 NFXL1Q6ZNB6 911 aa14.36□□□□□ -0.11
PSEN1-219ENST00000556951 TMC7Q7Z402 723 aa14.36□□□□□ -0.11
PSEN1-219ENST00000556951 NECTIN4Q96NY8 510 aa14.36□□□□□ -0.11
PSEN1-219ENST00000556951 MXRA8Q9BRK3 442 aa14.36□□□□□ -0.11
PSEN1-219ENST00000556951 MYL10Q9BUA6 226 aa14.36□□□□□ -0.11
PSEN1-219ENST00000556951 SPG21Q9NZD8 308 aa14.36□□□□□ -0.11
PSEN1-219ENST00000556951 NAP1L2Q9ULW6 460 aaPredicted RBP14.36□□□□□ -0.11
PSEN1-219ENST00000556951 GINS2Q9Y248 185 aa14.36□□□□□ -0.11
PSEN1-219ENST00000556951 NFASCO94856 1347 aa14.36□□□□□ -0.11
PSEN1-219ENST00000556951 CNOT1A5YKK6 2376 aaKnown RBP14.36□□□□□ -0.11
PSEN1-219ENST00000556951 CCDC69A6NI79 296 aa14.35□□□□□ -0.11
PSEN1-219ENST00000556951 SLC30A4O14863 429 aa14.35□□□□□ -0.11
PSEN1-219ENST00000556951 GPR182O15218 404 aa14.35□□□□□ -0.11
PSEN1-219ENST00000556951 GPR32O75388 356 aa14.35□□□□□ -0.11
PSEN1-219ENST00000556951 CCNE2O96020 404 aa14.35□□□□□ -0.11
PSEN1-219ENST00000556951 PDIA4P13667 645 aaKnown RBP14.35□□□□□ -0.11
PSEN1-219ENST00000556951 MTHFRP42898 656 aa14.35□□□□□ -0.11
PSEN1-219ENST00000556951 SCRN1Q12765 414 aa14.35□□□□□ -0.11
PSEN1-219ENST00000556951 CES5AQ6NT32 575 aa14.35□□□□□ -0.11
PSEN1-219ENST00000556951 ABHD15Q6UXT9 468 aa14.35□□□□□ -0.11
PSEN1-219ENST00000556951 CATIPQ7Z7H3 387 aa14.35□□□□□ -0.11
PSEN1-219ENST00000556951 CMTR1Q8N1G2 835 aaKnown RBP14.35□□□□□ -0.11
PSEN1-219ENST00000556951 SLC39A11Q8N1S5 342 aa14.35□□□□□ -0.11
PSEN1-219ENST00000556951 TNPO1Q92973 898 aaKnown RBP14.35□□□□□ -0.11
PSEN1-219ENST00000556951 ZNF558Q96NG5 402 aa14.35□□□□□ -0.11
PSEN1-219ENST00000556951 RNF216Q9NWF9 866 aaPredicted RBP14.35□□□□□ -0.11
PSEN1-219ENST00000556951 LHX6Q9UPM6 363 aa14.35□□□□□ -0.11
PSEN1-219ENST00000556951 SLC12A7Q9Y666 1083 aa14.35□□□□□ -0.11
PSEN1-219ENST00000556951 CACNA1IQ9P0X4 2223 aa14.35□□□□□ -0.11
PSEN1-219ENST00000556951 EVPLQ92817 2033 aa14.34□□□□□ -0.11
PSEN1-219ENST00000556951 GOLGA8BA8MQT2 603 aa14.34□□□□□ -0.11
PSEN1-219ENST00000556951 TAF4O00268 1085 aa14.34□□□□□ -0.11
PSEN1-219ENST00000556951 HBP1O60381 514 aa14.34□□□□□ -0.11
PSEN1-219ENST00000556951 CRYBB1P53674 252 aaPredicted RBP14.34□□□□□ -0.11
PSEN1-219ENST00000556951 RCAN1P53805 252 aa14.34□□□□□ -0.11
PSEN1-219ENST00000556951 RING1Q06587 406 aa14.34□□□□□ -0.11
PSEN1-219ENST00000556951 KIZQ2M2Z5 673 aa14.34□□□□□ -0.11
PSEN1-219ENST00000556951 CLLU1OSQ5K130 101 aa14.34□□□□□ -0.11
PSEN1-219ENST00000556951 RARS2Q5T160 578 aaKnown RBP14.34□□□□□ -0.11
PSEN1-219ENST00000556951 KIAA1841Q6NSI8 718 aa14.34□□□□□ -0.11
PSEN1-219ENST00000556951 ZNF654Q8IZM8 581 aa14.34□□□□□ -0.11
PSEN1-219ENST00000556951 KDF1Q8NAX2 398 aaPredicted RBP14.34□□□□□ -0.11
PSEN1-219ENST00000556951 SLC22A17Q8WUG5 538 aa14.34□□□□□ -0.11
PSEN1-219ENST00000556951 SECISBP2LQ93073 1101 aaKnown RBP14.34□□□□□ -0.11
PSEN1-219ENST00000556951 BORCS6Q96GS4 357 aa14.34□□□□□ -0.11
PSEN1-219ENST00000556951 PPP1R16BQ96T49 567 aa14.34□□□□□ -0.11
PSEN1-219ENST00000556951 USP18Q9UMW8 372 aa14.34□□□□□ -0.11
PSEN1-219ENST00000556951 USTQ9Y2C2 406 aa14.34□□□□□ -0.11
PSEN1-219ENST00000556951 WDFY3Q8IZQ1 3526 aa14.34□□□□□ -0.11
PSEN1-219ENST00000556951 hCG_1642624A0A1W2PR95 340 aa14.33□□□□□ -0.12
PSEN1-219ENST00000556951 ZBTB43O43298 467 aa14.33□□□□□ -0.12
PSEN1-219ENST00000556951 CXCL14O95715 111 aa14.33□□□□□ -0.12
PSEN1-219ENST00000556951 EPCAMP16422 314 aa14.33□□□□□ -0.12
PSEN1-219ENST00000556951 GJB2P29033 226 aa14.33□□□□□ -0.12
PSEN1-219ENST00000556951 CCT2P78371 535 aaKnown RBP14.33□□□□□ -0.12
PSEN1-219ENST00000556951 KRT17Q04695 432 aa14.33□□□□□ -0.12
PSEN1-219ENST00000556951 SMC1AQ14683 1233 aaKnown RBP14.33□□□□□ -0.12
PSEN1-219ENST00000556951 ODR4Q5SWX8 454 aa14.33□□□□□ -0.12
PSEN1-219ENST00000556951 APOA5Q6Q788 366 aa14.33□□□□□ -0.12
PSEN1-219ENST00000556951 ECHDC2Q86YB7 292 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms