RNA–Protein interactions for RNA: ENST00000556774.1

RCCD1-207, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-207ENST00000556774 ITIH3Q06033 890 aa17.79■□□□□ 0.44
RCCD1-207ENST00000556774 MTMR3Q13615 1198 aa17.79■□□□□ 0.44
RCCD1-207ENST00000556774 RARS2Q5T160 578 aaKnown RBP17.79■□□□□ 0.44
RCCD1-207ENST00000556774 CES5AQ6NT32 575 aa17.79■□□□□ 0.44
RCCD1-207ENST00000556774 TMEM173Q86WV6 379 aaPredicted RBP17.79■□□□□ 0.44
RCCD1-207ENST00000556774 ZNF710Q8N1W2 664 aa17.79■□□□□ 0.44
RCCD1-207ENST00000556774 ATOH1Q92858 354 aaPredicted RBP17.79■□□□□ 0.44
RCCD1-207ENST00000556774 TMEM169Q96HH4 297 aa17.79■□□□□ 0.44
RCCD1-207ENST00000556774 CCDC136Q96JN2 1154 aa17.79■□□□□ 0.44
RCCD1-207ENST00000556774 NECTIN4Q96NY8 510 aa17.79■□□□□ 0.44
RCCD1-207ENST00000556774 MRPL9Q9BYD2 267 aaKnown RBP17.79■□□□□ 0.44
RCCD1-207ENST00000556774 VPS54Q9P1Q0 977 aa17.79■□□□□ 0.44
RCCD1-207ENST00000556774 SEPT9Q9UHD8 586 aaPredicted RBP17.79■□□□□ 0.44
RCCD1-207ENST00000556774 SORCS3Q9UPU3 1222 aa17.79■□□□□ 0.44
RCCD1-207ENST00000556774 TMEM150BA6NC51 233 aa17.78■□□□□ 0.44
RCCD1-207ENST00000556774 ZC3H11AO75152 810 aaKnown RBP eCLIP17.78■□□□□ 0.44
RCCD1-207ENST00000556774 ALDH7A1P49419 539 aaKnown RBP17.78■□□□□ 0.44
RCCD1-207ENST00000556774 JAK3P52333 1124 aa17.78■□□□□ 0.44
RCCD1-207ENST00000556774 AKAP17AQ02040 695 aaKnown RBP17.78■□□□□ 0.44
RCCD1-207ENST00000556774 LONRF3Q496Y0 759 aa17.78■□□□□ 0.44
RCCD1-207ENST00000556774 MTERF2Q49AM1 385 aa17.78■□□□□ 0.44
RCCD1-207ENST00000556774 LRCH2Q5VUJ6 765 aa17.78■□□□□ 0.44
RCCD1-207ENST00000556774 KANK3Q6NY19 840 aa17.78■□□□□ 0.44
RCCD1-207ENST00000556774 C12orf76Q8N812 135 aaPredicted RBP17.78■□□□□ 0.44
RCCD1-207ENST00000556774 CCDC148Q8NFR7 591 aa17.78■□□□□ 0.44
RCCD1-207ENST00000556774 BICD2Q8TD16 824 aa17.78■□□□□ 0.44
RCCD1-207ENST00000556774 SLC5A5Q92911 643 aa17.78■□□□□ 0.44
RCCD1-207ENST00000556774 LPPQ93052 612 aa17.78■□□□□ 0.44
RCCD1-207ENST00000556774 JAKMIP1Q96N16 626 aaKnown RBP17.78■□□□□ 0.44
RCCD1-207ENST00000556774 TEKT3Q9BXF9 490 aa17.78■□□□□ 0.44
RCCD1-207ENST00000556774 ZBP1Q9H171 429 aa17.78■□□□□ 0.44
RCCD1-207ENST00000556774 DACT1Q9NYF0 836 aa17.78■□□□□ 0.44
RCCD1-207ENST00000556774 C2orf16Q68DN1 1984 aa17.78■□□□□ 0.44
RCCD1-207ENST00000556774 H0Y858 1186 aa17.77■□□□□ 0.44
RCCD1-207ENST00000556774 CDC45O75419 566 aa17.77■□□□□ 0.44
RCCD1-207ENST00000556774 CXCL14O95715 111 aa17.77■□□□□ 0.44
RCCD1-207ENST00000556774 ASGR2P07307 311 aa17.77■□□□□ 0.44
RCCD1-207ENST00000556774 EPCAMP16422 314 aa17.77■□□□□ 0.44
RCCD1-207ENST00000556774 SFNP31947 248 aa17.77■□□□□ 0.44
RCCD1-207ENST00000556774 MTHFRP42898 656 aa17.77■□□□□ 0.44
RCCD1-207ENST00000556774 TARBP2Q15633 366 aaKnown RBP17.77■□□□□ 0.44
RCCD1-207ENST00000556774 UBALD2Q8IYN6 164 aa17.77■□□□□ 0.44
RCCD1-207ENST00000556774 VPS52Q8N1B4 723 aa17.77■□□□□ 0.44
RCCD1-207ENST00000556774 BCL7CQ8WUZ0 217 aaPredicted RBP17.77■□□□□ 0.44
RCCD1-207ENST00000556774 RIT2Q99578 217 aa17.77■□□□□ 0.44
RCCD1-207ENST00000556774 SH2D3AQ9BRG2 576 aa17.77■□□□□ 0.44
RCCD1-207ENST00000556774 SLC26A6Q9BXS9 759 aa17.77■□□□□ 0.44
RCCD1-207ENST00000556774 GCOM2Q9BZD3 368 aaPredicted RBP17.77■□□□□ 0.44
RCCD1-207ENST00000556774 DMDP11532 3685 aa17.77■□□□□ 0.43
RCCD1-207ENST00000556774 SPTBN4Q9H254 2564 aa17.77■□□□□ 0.43
RCCD1-207ENST00000556774 PHKA2P46019 1235 aa17.76■□□□□ 0.43
RCCD1-207ENST00000556774 BMS1Q14692 1282 aaKnown RBP17.76■□□□□ 0.43
RCCD1-207ENST00000556774 NTRK3Q16288 839 aa17.76■□□□□ 0.43
RCCD1-207ENST00000556774 TWF2Q6IBS0 349 aaKnown RBP17.76■□□□□ 0.43
RCCD1-207ENST00000556774 MIER3Q7Z3K6 550 aa17.76■□□□□ 0.43
RCCD1-207ENST00000556774 TDRD5Q8NAT2 981 aaKnown RBP17.76■□□□□ 0.43
RCCD1-207ENST00000556774 FEZF2Q8TBJ5 459 aa17.76■□□□□ 0.43
RCCD1-207ENST00000556774 RNF26Q9BY78 433 aaPredicted RBP17.76■□□□□ 0.43
RCCD1-207ENST00000556774 DZANK1Q9NVP4 752 aa17.76■□□□□ 0.43
RCCD1-207ENST00000556774 PIN4Q9Y237 131 aaKnown RBP17.76■□□□□ 0.43
RCCD1-207ENST00000556774 INPP5FQ9Y2H2 1132 aa17.76■□□□□ 0.43
RCCD1-207ENST00000556774 RIF1Q5UIP0 2472 aaKnown RBP17.75■□□□□ 0.43
RCCD1-207ENST00000556774 A0A087WZ62 844 aa17.75■□□□□ 0.43
RCCD1-207ENST00000556774 MEIS3P2A8K0S8 358 aa17.75■□□□□ 0.43
RCCD1-207ENST00000556774 GALR2O43603 387 aaPredicted RBP17.75■□□□□ 0.43
RCCD1-207ENST00000556774 SFPQP23246 707 aaKnown RBP eCLIP17.75■□□□□ 0.43
RCCD1-207ENST00000556774 KIAA1841Q6NSI8 718 aa17.75■□□□□ 0.43
RCCD1-207ENST00000556774 BLOC1S2Q6QNY1 142 aa17.75■□□□□ 0.43
RCCD1-207ENST00000556774 TMEM105Q8N8V8 129 aa17.75■□□□□ 0.43
RCCD1-207ENST00000556774 TMEM87AQ8NBN3 555 aa17.75■□□□□ 0.43
RCCD1-207ENST00000556774 SNX27Q96L92 541 aa17.75■□□□□ 0.43
RCCD1-207ENST00000556774 CEP89Q96ST8 783 aa17.75■□□□□ 0.43
RCCD1-207ENST00000556774 FDXACB1Q9BRP7 624 aaPredicted RBP17.75■□□□□ 0.43
RCCD1-207ENST00000556774 IRF2BPLQ9H1B7 796 aa17.75■□□□□ 0.43
RCCD1-207ENST00000556774 NCOA5Q9HCD5 579 aaKnown RBP17.75■□□□□ 0.43
RCCD1-207ENST00000556774 CHST12Q9NRB3 414 aa17.75■□□□□ 0.43
RCCD1-207ENST00000556774 TBC1D13Q9NVG8 400 aa17.75■□□□□ 0.43
RCCD1-207ENST00000556774 SNX14Q9Y5W7 946 aa17.75■□□□□ 0.43
RCCD1-207ENST00000556774 PTPRZ1P23471 2315 aaPredicted RBP17.75■□□□□ 0.43
RCCD1-207ENST00000556774 VPS13AQ96RL7 3174 aa17.75■□□□□ 0.43
RCCD1-207ENST00000556774 FAM186AA6NE01 2351 aa17.74■□□□□ 0.43
RCCD1-207ENST00000556774 PSMD10O75832 226 aa17.74■□□□□ 0.43
RCCD1-207ENST00000556774 STBD1O95210 358 aa17.74■□□□□ 0.43
RCCD1-207ENST00000556774 TDP2O95551 362 aa17.74■□□□□ 0.43
RCCD1-207ENST00000556774 CTSAP10619 480 aa17.74■□□□□ 0.43
RCCD1-207ENST00000556774 USP11P51784 963 aa17.74■□□□□ 0.43
RCCD1-207ENST00000556774 XKR3Q5GH77 459 aa17.74■□□□□ 0.43
RCCD1-207ENST00000556774 NOMO2Q5JPE7 1267 aa17.74■□□□□ 0.43
RCCD1-207ENST00000556774 GLB1LQ6UWU2 654 aa17.74■□□□□ 0.43
RCCD1-207ENST00000556774 DDX53Q86TM3 631 aaKnown RBP17.74■□□□□ 0.43
RCCD1-207ENST00000556774 RDM1Q8NG50 284 aa17.74■□□□□ 0.43
RCCD1-207ENST00000556774 TBCKQ8TEA7 893 aa17.74■□□□□ 0.43
RCCD1-207ENST00000556774 KCNB2Q92953 911 aa17.74■□□□□ 0.43
RCCD1-207ENST00000556774 IGSF21Q96ID5 467 aa17.74■□□□□ 0.43
RCCD1-207ENST00000556774 NIFKQ9BYG3 293 aaKnown RBP17.74■□□□□ 0.43
RCCD1-207ENST00000556774 GBP3Q9H0R5 595 aa17.74■□□□□ 0.43
RCCD1-207ENST00000556774 NRDE2Q9H7Z3 1164 aa17.74■□□□□ 0.43
RCCD1-207ENST00000556774 LIMD1Q9UGP4 676 aa17.74■□□□□ 0.43
RCCD1-207ENST00000556774 DBR1Q9UK59 544 aaKnown RBP17.74■□□□□ 0.43
RCCD1-207ENST00000556774 ARID2Q68CP9 1835 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms