RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ATP2B1P20020 1258 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 TRAPPC10P48553 1259 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 DNM2P50570 870 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 KCNQ1P51787 676 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 CDC42EP1Q00587 391 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 ZNF174Q15697 407 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 PTPROQ16827 1216 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 XKR9Q5GH70 373 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 CLLU1OSQ5K130 101 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 ECHDC2Q86YB7 292 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 HSCBQ8IWL3 235 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 TPH2Q8IWU9 490 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 IL27Q8NEV9 243 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 PRPF31Q8WWY3 499 aaKnown RBP11.53□□□□□ -0.56
SHMT2-224ENST00000556737 PSPC1Q8WXF1 523 aaKnown RBP11.53□□□□□ -0.56
SHMT2-224ENST00000556737 HLA-CQ95604 372 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 TRAIPQ9BWF2 469 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 PLVAPQ9BX97 442 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 LMAN2LQ9H0V9 348 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 CWH43Q9H720 699 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 UBE2ZQ9H832 354 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-224ENST00000556737 ATP6V0A4Q9HBG4 840 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 COG5Q9UP83 839 aa11.53□□□□□ -0.56
SHMT2-224ENST00000556737 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-224ENST00000556737 MED24O75448 989 aa11.52□□□□□ -0.57
SHMT2-224ENST00000556737 BMP1P13497 986 aa11.52□□□□□ -0.57
SHMT2-224ENST00000556737 SFPQP23246 707 aaKnown RBP eCLIP11.52□□□□□ -0.57
SHMT2-224ENST00000556737 RARRES1P49788 294 aa11.52□□□□□ -0.57
SHMT2-224ENST00000556737 LAMTOR4Q0VGL1 99 aa11.52□□□□□ -0.57
SHMT2-224ENST00000556737 TCEAL5Q5H9L2 206 aa11.52□□□□□ -0.57
SHMT2-224ENST00000556737 LRRC55Q6ZSA7 311 aa11.52□□□□□ -0.57
SHMT2-224ENST00000556737 OTUD6AQ7L8S5 288 aa11.52□□□□□ -0.57
SHMT2-224ENST00000556737 FERMT3Q86UX7 667 aa11.52□□□□□ -0.57
SHMT2-224ENST00000556737 CATSPER3Q86XQ3 398 aa11.52□□□□□ -0.57
SHMT2-224ENST00000556737 KLHL23Q8NBE8 558 aa11.52□□□□□ -0.57
SHMT2-224ENST00000556737 ADAMTS19Q8TE59 1207 aa11.52□□□□□ -0.57
SHMT2-224ENST00000556737 CASD1Q96PB1 797 aa11.52□□□□□ -0.57
SHMT2-224ENST00000556737 MTRQ99707 1265 aa11.52□□□□□ -0.57
SHMT2-224ENST00000556737 TMEM117Q9H0C3 514 aa11.52□□□□□ -0.57
SHMT2-224ENST00000556737 NSUN3Q9H649 340 aaKnown RBP11.52□□□□□ -0.57
SHMT2-224ENST00000556737 MINDY3Q9H8M7 445 aa11.52□□□□□ -0.57
SHMT2-224ENST00000556737 TUFT1Q9NNX1 390 aa11.52□□□□□ -0.57
SHMT2-224ENST00000556737 ALG13Q9NP73 1137 aaKnown RBP11.52□□□□□ -0.57
SHMT2-224ENST00000556737 ANKEF1Q9NU02 776 aa11.52□□□□□ -0.57
SHMT2-224ENST00000556737 AGPAT5Q9NUQ2 364 aa11.52□□□□□ -0.57
SHMT2-224ENST00000556737 PLAGL2Q9UPG8 496 aa11.52□□□□□ -0.57
SHMT2-224ENST00000556737 TCF20Q9UGU0 1960 aaKnown RBP11.51□□□□□ -0.57
SHMT2-224ENST00000556737 A0A087WWV3 80 aa11.51□□□□□ -0.57
SHMT2-224ENST00000556737 A0A0U1RQF3 1178 aa11.51□□□□□ -0.57
SHMT2-224ENST00000556737 ZSCAN20P17040 1043 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-224ENST00000556737 GJB2P29033 226 aa11.51□□□□□ -0.57
SHMT2-224ENST00000556737 IRS1P35568 1242 aa11.51□□□□□ -0.57
SHMT2-224ENST00000556737 PHKA2P46019 1235 aa11.51□□□□□ -0.57
SHMT2-224ENST00000556737 FXR2P51116 673 aaKnown RBP eCLIP11.51□□□□□ -0.57
SHMT2-224ENST00000556737 CAPSQ13938 189 aa11.51□□□□□ -0.57
SHMT2-224ENST00000556737 NAALADL2Q58DX5 795 aa11.51□□□□□ -0.57
SHMT2-224ENST00000556737 POTEGQ6S5H5 508 aa11.51□□□□□ -0.57
SHMT2-224ENST00000556737 EXOC8Q8IYI6 725 aa11.51□□□□□ -0.57
SHMT2-224ENST00000556737 COLGALT1Q8NBJ5 622 aa11.51□□□□□ -0.57
SHMT2-224ENST00000556737 SPPL3Q8TCT6 385 aa11.51□□□□□ -0.57
SHMT2-224ENST00000556737 ASAP3Q8TDY4 903 aa11.51□□□□□ -0.57
SHMT2-224ENST00000556737 PIGOQ8TEQ8 1089 aa11.51□□□□□ -0.57
SHMT2-224ENST00000556737 TCP11Q8WWU5 503 aa11.51□□□□□ -0.57
SHMT2-224ENST00000556737 SYMPKQ92797 1274 aaKnown RBP11.51□□□□□ -0.57
SHMT2-224ENST00000556737 POLR3CQ9BUI4 534 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-224ENST00000556737 CHST12Q9NRB3 414 aa11.51□□□□□ -0.57
SHMT2-224ENST00000556737 TYW1Q9NV66 732 aaKnown RBP11.51□□□□□ -0.57
SHMT2-224ENST00000556737 RNF216Q9NWF9 866 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-224ENST00000556737 NOL7Q9UMY1 257 aaKnown RBP11.51□□□□□ -0.57
SHMT2-224ENST00000556737 PIN4Q9Y237 131 aaKnown RBP11.51□□□□□ -0.57
SHMT2-224ENST00000556737 PCDHB6Q9Y5E3 794 aa11.51□□□□□ -0.57
SHMT2-224ENST00000556737 MEIS3P2A8K0S8 358 aa11.5□□□□□ -0.57
SHMT2-224ENST00000556737 HOXA2O43364 376 aa11.5□□□□□ -0.57
SHMT2-224ENST00000556737 USO1O60763 962 aaKnown RBP11.5□□□□□ -0.57
SHMT2-224ENST00000556737 DGAT1O75907 488 aa11.5□□□□□ -0.57
SHMT2-224ENST00000556737 CSPG5O95196 566 aa11.5□□□□□ -0.57
SHMT2-224ENST00000556737 GLRA2P23416 452 aa11.5□□□□□ -0.57
SHMT2-224ENST00000556737 HOXA11P31270 313 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-224ENST00000556737 ARL2P36404 184 aa11.5□□□□□ -0.57
SHMT2-224ENST00000556737 TECP42680 631 aa11.5□□□□□ -0.57
SHMT2-224ENST00000556737 MCM2P49736 904 aa11.5□□□□□ -0.57
SHMT2-224ENST00000556737 HYAL1Q12794 435 aa11.5□□□□□ -0.57
SHMT2-224ENST00000556737 GNL2Q13823 731 aaKnown RBP11.5□□□□□ -0.57
SHMT2-224ENST00000556737 ECM1Q16610 540 aa11.5□□□□□ -0.57
SHMT2-224ENST00000556737 AMHR2Q16671 573 aa11.5□□□□□ -0.57
SHMT2-224ENST00000556737 UBXN11Q5T124 520 aa11.5□□□□□ -0.57
SHMT2-224ENST00000556737 CATSPER4Q7RTX7 472 aa11.5□□□□□ -0.57
SHMT2-224ENST00000556737 SRGAP1Q7Z6B7 1085 aa11.5□□□□□ -0.57
SHMT2-224ENST00000556737 IFNLR1Q8IU57 520 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-224ENST00000556737 LRRC43Q8N309 656 aa11.5□□□□□ -0.57
SHMT2-224ENST00000556737 RNF149Q8NC42 400 aa11.5□□□□□ -0.57
SHMT2-224ENST00000556737 HELQQ8TDG4 1101 aa11.5□□□□□ -0.57
SHMT2-224ENST00000556737 POF1BQ8WVV4 589 aa11.5□□□□□ -0.57
SHMT2-224ENST00000556737 NECAB3Q96P71 396 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-224ENST00000556737 INO80BQ9C086 356 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-224ENST00000556737 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.5□□□□□ -0.57
SHMT2-224ENST00000556737 DACT1Q9NYF0 836 aa11.5□□□□□ -0.57
SHMT2-224ENST00000556737 DBR1Q9UK59 544 aaKnown RBP11.5□□□□□ -0.57
SHMT2-224ENST00000556737 PCDHGC5Q9Y5F6 944 aa11.5□□□□□ -0.57
SHMT2-224ENST00000556737 BDP1A6H8Y1 2624 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms