RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 KANK3Q6NY19 840 aa15.53■□□□□ 0.08
VIPAS39-208ENST00000556412 DEPTORQ8TB45 409 aa15.53■□□□□ 0.08
VIPAS39-208ENST00000556412 KIFC3Q9BVG8 833 aa15.53■□□□□ 0.08
VIPAS39-208ENST00000556412 PARVGQ9HBI0 331 aa15.53■□□□□ 0.08
VIPAS39-208ENST00000556412 PANK4Q9NVE7 773 aa15.53■□□□□ 0.08
VIPAS39-208ENST00000556412 ASAP2O43150 1006 aa15.52■□□□□ 0.08
VIPAS39-208ENST00000556412 CSDE1O75534 798 aaKnown RBP15.52■□□□□ 0.08
VIPAS39-208ENST00000556412 IQCF3P0C7M6 154 aa15.52■□□□□ 0.08
VIPAS39-208ENST00000556412 GHRP10912 638 aa15.52■□□□□ 0.08
VIPAS39-208ENST00000556412 PLS3P13797 630 aa15.52■□□□□ 0.08
VIPAS39-208ENST00000556412 RBL2Q08999 1139 aa15.52■□□□□ 0.08
VIPAS39-208ENST00000556412 MGAT3Q09327 533 aa15.52■□□□□ 0.08
VIPAS39-208ENST00000556412 POSTNQ15063 836 aa15.52■□□□□ 0.08
VIPAS39-208ENST00000556412 PPP2R5AQ15172 486 aa15.52■□□□□ 0.08
VIPAS39-208ENST00000556412 CAMK4Q16566 473 aa15.52■□□□□ 0.08
VIPAS39-208ENST00000556412 DEFB128Q7Z7B8 93 aa15.52■□□□□ 0.08
VIPAS39-208ENST00000556412 GPT2Q8TD30 523 aa15.52■□□□□ 0.08
VIPAS39-208ENST00000556412 DNAJC19Q96DA6 116 aa15.52■□□□□ 0.08
VIPAS39-208ENST00000556412 C7orf25Q9BPX7 421 aa15.52■□□□□ 0.08
VIPAS39-208ENST00000556412 GCOM2Q9BZD3 368 aaPredicted RBP15.52■□□□□ 0.08
VIPAS39-208ENST00000556412 ADAMTS10Q9H324 1103 aa15.52■□□□□ 0.08
VIPAS39-208ENST00000556412 LARSQ9P2J5 1176 aaKnown RBP15.52■□□□□ 0.08
VIPAS39-208ENST00000556412 HOOK1Q9UJC3 728 aaKnown RBP15.52■□□□□ 0.08
VIPAS39-208ENST00000556412 GTPBP6O43824 516 aaPredicted RBP15.52■□□□□ 0.07
VIPAS39-208ENST00000556412 PHKA2P46019 1235 aa15.52■□□□□ 0.07
VIPAS39-208ENST00000556412 CRYBB1P53674 252 aaPredicted RBP15.52■□□□□ 0.07
VIPAS39-208ENST00000556412 CDC42EP1Q00587 391 aa15.52■□□□□ 0.07
VIPAS39-208ENST00000556412 PNOCQ13519 176 aa15.52■□□□□ 0.07
VIPAS39-208ENST00000556412 HERC4Q5GLZ8 1057 aaPredicted RBP15.52■□□□□ 0.07
VIPAS39-208ENST00000556412 TRAF7Q6Q0C0 670 aa15.52■□□□□ 0.07
VIPAS39-208ENST00000556412 ZNF410Q86VK4 478 aa15.52■□□□□ 0.07
VIPAS39-208ENST00000556412 SFR1Q86XK3 245 aa15.52■□□□□ 0.07
VIPAS39-208ENST00000556412 CCDC65Q8IXS2 484 aa15.52■□□□□ 0.07
VIPAS39-208ENST00000556412 TMEM199Q8N511 208 aa15.52■□□□□ 0.07
VIPAS39-208ENST00000556412 ERCC4Q92889 916 aaPredicted RBP15.52■□□□□ 0.07
VIPAS39-208ENST00000556412 BADQ92934 168 aa15.52■□□□□ 0.07
VIPAS39-208ENST00000556412 TIGD1Q96MW7 591 aa15.52■□□□□ 0.07
VIPAS39-208ENST00000556412 KMT5AQ9NQR1 393 aa15.52■□□□□ 0.07
VIPAS39-208ENST00000556412 TBC1D7Q9P0N9 293 aa15.52■□□□□ 0.07
VIPAS39-208ENST00000556412 INO80B-WBP1J3KQ70 363 aa15.51■□□□□ 0.07
VIPAS39-208ENST00000556412 SLC16A4O15374 487 aa15.51■□□□□ 0.07
VIPAS39-208ENST00000556412 NAMPTP43490 491 aa15.51■□□□□ 0.07
VIPAS39-208ENST00000556412 NPTX2P47972 431 aa15.51■□□□□ 0.07
VIPAS39-208ENST00000556412 FAM26DQ5JW98 314 aa15.51■□□□□ 0.07
VIPAS39-208ENST00000556412 ZBTB8OSQ8IWT0 167 aa15.51■□□□□ 0.07
VIPAS39-208ENST00000556412 TMEM40Q8WWA1 233 aa15.51■□□□□ 0.07
VIPAS39-208ENST00000556412 LBHD1Q9BQE6 289 aaPredicted RBP15.51■□□□□ 0.07
VIPAS39-208ENST00000556412 INO80BQ9C086 356 aaPredicted RBP15.51■□□□□ 0.07
VIPAS39-208ENST00000556412 MBD3O95983 291 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 DARSP14868 501 aaKnown RBP15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 CSF2RAP15509 400 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 FGFR4P22455 802 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 RGS19P49795 217 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 SMTNP53814 917 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 MDM2Q00987 491 aaPredicted RBP15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 MBTPS1Q14703 1052 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 MFSD5Q6N075 450 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 FAM178BQ8IXR5 827 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 ZNF710Q8N1W2 664 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 OSBPL7Q9BZF2 842 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 C17orf75Q9HAS0 396 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 IFT122Q9HBG6 1241 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 K7ENM7 598 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 TRAK2O60296 914 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 NBNO60934 754 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 RPS6KA5O75582 802 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 MYL1P05976 194 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 GAP43P17677 238 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 EIF4BP23588 611 aaKnown RBP15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 ZNF131P52739 623 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 NFX1Q12986 1120 aaKnown RBP15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 COASYQ13057 564 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 LPIN1Q14693 890 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 FBXO47Q5MNV8 452 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 UNC13DQ70J99 1090 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 HPS3Q969F9 1004 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 MRPL44Q9H9J2 332 aaKnown RBP15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 EXOC1Q9NV70 894 aa15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 NOC2LQ9Y3T9 749 aaKnown RBP15.5■□□□□ 0.07
VIPAS39-208ENST00000556412 ADGRA3Q8IWK6 1321 aa15.49■□□□□ 0.07
VIPAS39-208ENST00000556412 RPN1P04843 607 aaKnown RBP15.49■□□□□ 0.07
VIPAS39-208ENST00000556412 NMT1P30419 496 aaKnown RBP15.49■□□□□ 0.07
VIPAS39-208ENST00000556412 CD52P31358 61 aa15.49■□□□□ 0.07
VIPAS39-208ENST00000556412 PTENP60484 403 aa15.49■□□□□ 0.07
VIPAS39-208ENST00000556412 MLLT1Q03111 559 aaPredicted RBP15.49■□□□□ 0.07
VIPAS39-208ENST00000556412 DPYDQ12882 1025 aa15.49■□□□□ 0.07
VIPAS39-208ENST00000556412 PAK2Q13177 524 aa15.49■□□□□ 0.07
VIPAS39-208ENST00000556412 TSHZ1Q6ZSZ6 1077 aa15.49■□□□□ 0.07
VIPAS39-208ENST00000556412 CCDC47Q96A33 483 aaKnown RBP15.49■□□□□ 0.07
VIPAS39-208ENST00000556412 C2orf40Q9H1Z8 148 aa15.49■□□□□ 0.07
VIPAS39-208ENST00000556412 MINDY3Q9H8M7 445 aa15.49■□□□□ 0.07
VIPAS39-208ENST00000556412 AGO3Q9H9G7 860 aaKnown RBP15.49■□□□□ 0.07
VIPAS39-208ENST00000556412 TCHHQ07283 1943 aa15.49■□□□□ 0.07
VIPAS39-208ENST00000556412 MYH9P35579 1960 aaKnown RBP15.48■□□□□ 0.07
VIPAS39-208ENST00000556412 SMC2O95347 1197 aa15.48■□□□□ 0.07
VIPAS39-208ENST00000556412 ACRP10323 421 aa15.48■□□□□ 0.07
VIPAS39-208ENST00000556412 SFPQP23246 707 aaKnown RBP eCLIP15.48■□□□□ 0.07
VIPAS39-208ENST00000556412 FPGSQ05932 587 aa15.48■□□□□ 0.07
VIPAS39-208ENST00000556412 TMEM132AQ24JP5 1023 aa15.48■□□□□ 0.07
VIPAS39-208ENST00000556412 KMT5BQ4FZB7 885 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms