RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.53□□□□□ -1.52
ATXN3-237ENST00000556274 SSC5DA1L4H1 1573 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 A0A1W2PQH9 124 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 TCRBV5S4A2TA0A5A2 114 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 WASH4PA8MWX3 477 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 M0R2C6 588 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 CTNND1O60716 968 aaKnown RBP5.52□□□□□ -1.53
ATXN3-237ENST00000556274 TP53P04637 393 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-237ENST00000556274 ZBTB48P10074 688 aaPredicted RBP5.52□□□□□ -1.53
ATXN3-237ENST00000556274 CETPP11597 493 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 TM4SF4P48230 202 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 PLCD1P51178 756 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 PMS1P54277 932 aaKnown RBP5.52□□□□□ -1.53
ATXN3-237ENST00000556274 JAG1P78504 1218 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 PPATQ06203 517 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 SPP2Q13103 211 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 SNAPC2Q13487 334 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 CLEC16AQ2KHT3 1053 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 ABCB5Q2M3G0 1257 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 CWC27Q6UX04 472 aaKnown RBP5.52□□□□□ -1.53
ATXN3-237ENST00000556274 NFXL1Q6ZNB6 911 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 MCF2L2Q86YR7 1114 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 CCDC144CPQ8IYA2 1237 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 SCYL3Q8IZE3 742 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 FAM169BQ8N8A8 192 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 C19orf47Q8N9M1 422 aaKnown RBP5.52□□□□□ -1.53
ATXN3-237ENST00000556274 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.52□□□□□ -1.53
ATXN3-237ENST00000556274 PI4K2BQ8TCG2 481 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 APPBP2Q92624 585 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 OSBP2Q969R2 916 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 DYNLL2Q96FJ2 89 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 STRBPQ96SI9 672 aaKnown RBP5.52□□□□□ -1.53
ATXN3-237ENST00000556274 RIOK1Q9BRS2 568 aaKnown RBP5.52□□□□□ -1.53
ATXN3-237ENST00000556274 GPR62Q9BZJ7 368 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 NACAP1Q9BZK3 213 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 DIAPH3Q9NSV4 1193 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 ATP8A2Q9NTI2 1148 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 FAM86C1Q9NVL1 165 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 STAP2Q9UGK3 403 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 SERPINB13Q9UIV8 391 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 FBXL21Q9UKT6 434 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 ISY1Q9ULR0 285 aaKnown RBP5.52□□□□□ -1.53
ATXN3-237ENST00000556274 SLC12A7Q9Y666 1083 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 LAMA4Q16363 1823 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 SMCHD1A6NHR9 2005 aa5.52□□□□□ -1.53
ATXN3-237ENST00000556274 ZSWIM8A7E2V4 1837 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 SMAD7O15105 426 aaKnown RBP5.51□□□□□ -1.53
ATXN3-237ENST00000556274 GPAA1O43292 621 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 IGSF3O75054 1194 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 GH2P01242 217 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 SLC3A2P08195 630 aaKnown RBP5.51□□□□□ -1.53
ATXN3-237ENST00000556274 FGRP09769 529 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 HSPA8P11142 646 aaKnown RBP5.51□□□□□ -1.53
ATXN3-237ENST00000556274 SRFP11831 508 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 SDSP20132 328 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 TPP2P29144 1249 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-237ENST00000556274 ETFBP38117 255 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 NMIQ13287 307 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-237ENST00000556274 PPIL2Q13356 520 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 AUHQ13825 339 aaKnown RBP5.51□□□□□ -1.53
ATXN3-237ENST00000556274 GNPTABQ3T906 1256 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 MCMDC2Q4G0Z9 681 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 RRP12Q5JTH9 1297 aaKnown RBP5.51□□□□□ -1.53
ATXN3-237ENST00000556274 TDRD10Q5VZ19 366 aaKnown RBP5.51□□□□□ -1.53
ATXN3-237ENST00000556274 CTR9Q6PD62 1173 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 SKAP1Q86WV1 359 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 IFNL3Q8IZI9 196 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 ZNF444Q8N0Y2 327 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-237ENST00000556274 AGBL5Q8NDL9 886 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 FAM227BQ96M60 508 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 FEZ1Q99689 392 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 PRDM14Q9GZV8 571 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 NAPBQ9H115 298 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 AS3MTQ9HBK9 375 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 DCP1AQ9NPI6 582 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-237ENST00000556274 TMOD4Q9NZQ9 345 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 HERC5Q9UII4 1024 aaKnown RBP5.51□□□□□ -1.53
ATXN3-237ENST00000556274 ZNF112Q9UJU3 913 aa5.51□□□□□ -1.53
ATXN3-237ENST00000556274 ZNF214Q9UL59 606 aaPredicted RBP5.51□□□□□ -1.53
ATXN3-237ENST00000556274 BAZ2BQ9UIF8 2168 aaKnown RBP5.5□□□□□ -1.53
ATXN3-237ENST00000556274 PLXNA1Q9UIW2 1896 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 GSG1L2A8MUP6 293 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 C9IYK1 514 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 BTBD19C9JJ37 291 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 SMIM22K7EJ46 135 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 PDHXO00330 501 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 CA12O43570 354 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 ASNSP08243 561 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 GNAT2P19087 354 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 HMGCS2P54868 508 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 ZP2Q05996 745 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 SNW1Q13573 536 aaKnown RBP5.5□□□□□ -1.53
ATXN3-237ENST00000556274 RRP1BQ14684 758 aaKnown RBP5.5□□□□□ -1.53
ATXN3-237ENST00000556274 KIF22Q14807 665 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 SEPT2Q15019 361 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 PLCL1Q15111 1095 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 SHROOM1Q2M3G4 852 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-237ENST00000556274 BBS9Q3SYG4 887 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 TTC22Q5TAA0 569 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 C12orf60Q5U649 245 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms