RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 SPRYD3Q8NCJ5 442 aa16.89■□□□□ 0.29
ACTN1-217ENST00000556203 POLR3FQ9H1D9 316 aaPredicted RBP16.89■□□□□ 0.29
ACTN1-217ENST00000556203 BHMT2Q9H2M3 363 aa16.89■□□□□ 0.29
ACTN1-217ENST00000556203 RC3H2Q9HBD1 1191 aaKnown RBP16.89■□□□□ 0.29
ACTN1-217ENST00000556203 GPRC5CQ9NQ84 441 aa16.89■□□□□ 0.29
ACTN1-217ENST00000556203 PCDHB7Q9Y5E2 793 aa16.89■□□□□ 0.29
ACTN1-217ENST00000556203 CLIC4Q9Y696 253 aa16.89■□□□□ 0.29
ACTN1-217ENST00000556203 IGFBP4P22692 258 aa16.88■□□□□ 0.29
ACTN1-217ENST00000556203 GLRA2P23416 452 aa16.88■□□□□ 0.29
ACTN1-217ENST00000556203 ERVK-21P61565 698 aa16.88■□□□□ 0.29
ACTN1-217ENST00000556203 TFDP1Q14186 410 aa16.88■□□□□ 0.29
ACTN1-217ENST00000556203 CATSPER4Q7RTX7 472 aa16.88■□□□□ 0.29
ACTN1-217ENST00000556203 SRGAP1Q7Z6B7 1085 aa16.88■□□□□ 0.29
ACTN1-217ENST00000556203 MCPH1Q8NEM0 835 aa16.88■□□□□ 0.29
ACTN1-217ENST00000556203 ZNF689Q96CS4 500 aaPredicted RBP16.88■□□□□ 0.29
ACTN1-217ENST00000556203 C17orf80Q9BSJ5 609 aa16.88■□□□□ 0.29
ACTN1-217ENST00000556203 ZSCAN16Q9H4T2 348 aaPredicted RBP16.88■□□□□ 0.29
ACTN1-217ENST00000556203 CDH23Q9H251 3354 aa16.88■□□□□ 0.29
ACTN1-217ENST00000556203 ADGRA3Q8IWK6 1321 aa16.88■□□□□ 0.29
ACTN1-217ENST00000556203 CYP11B2P19099 503 aa16.87■□□□□ 0.29
ACTN1-217ENST00000556203 PHKA2P46019 1235 aa16.87■□□□□ 0.29
ACTN1-217ENST00000556203 GATMP50440 423 aa16.87■□□□□ 0.29
ACTN1-217ENST00000556203 FAM189BP81408 668 aa16.87■□□□□ 0.29
ACTN1-217ENST00000556203 CAPSQ13938 189 aa16.87■□□□□ 0.29
ACTN1-217ENST00000556203 BTG3Q14201 252 aaPredicted RBP16.87■□□□□ 0.29
ACTN1-217ENST00000556203 FAM102BQ5T8I3 360 aa16.87■□□□□ 0.29
ACTN1-217ENST00000556203 FIBCD1Q8N539 461 aa16.87■□□□□ 0.29
ACTN1-217ENST00000556203 MINDY3Q9H8M7 445 aa16.87■□□□□ 0.29
ACTN1-217ENST00000556203 CHST12Q9NRB3 414 aa16.87■□□□□ 0.29
ACTN1-217ENST00000556203 RNF216Q9NWF9 866 aaPredicted RBP16.87■□□□□ 0.29
ACTN1-217ENST00000556203 DNM3Q9UQ16 869 aa16.87■□□□□ 0.29
ACTN1-217ENST00000556203 PIN4Q9Y237 131 aaKnown RBP16.87■□□□□ 0.29
ACTN1-217ENST00000556203 E9PMD0 336 aa16.86■□□□□ 0.29
ACTN1-217ENST00000556203 EYA4O95677 639 aa16.86■□□□□ 0.29
ACTN1-217ENST00000556203 PTENP60484 403 aa16.86■□□□□ 0.29
ACTN1-217ENST00000556203 CEBPZQ03701 1054 aaKnown RBP16.86■□□□□ 0.29
ACTN1-217ENST00000556203 GRIN1Q05586 938 aa16.86■□□□□ 0.29
ACTN1-217ENST00000556203 PTPAQ15257 358 aa16.86■□□□□ 0.29
ACTN1-217ENST00000556203 PAN2Q504Q3 1202 aaKnown RBP16.86■□□□□ 0.29
ACTN1-217ENST00000556203 ECHDC2Q86YB7 292 aa16.86■□□□□ 0.29
ACTN1-217ENST00000556203 CMTR2Q8IYT2 770 aaKnown RBP16.86■□□□□ 0.29
ACTN1-217ENST00000556203 MAFAQ8NHW3 353 aaPredicted RBP16.86■□□□□ 0.29
ACTN1-217ENST00000556203 AK8Q96MA6 479 aa16.86■□□□□ 0.29
ACTN1-217ENST00000556203 PNMA5Q96PV4 448 aa16.86■□□□□ 0.29
ACTN1-217ENST00000556203 PLIN2Q99541 437 aa16.86■□□□□ 0.29
ACTN1-217ENST00000556203 ELAC1Q9H777 363 aaKnown RBP16.86■□□□□ 0.29
ACTN1-217ENST00000556203 TMEM161AQ9NX61 479 aa16.86■□□□□ 0.29
ACTN1-217ENST00000556203 DACT1Q9NYF0 836 aa16.86■□□□□ 0.29
ACTN1-217ENST00000556203 FGFR1P11362 822 aa16.85■□□□□ 0.29
ACTN1-217ENST00000556203 GRB10Q13322 594 aa16.85■□□□□ 0.29
ACTN1-217ENST00000556203 EPC2Q52LR7 807 aa16.85■□□□□ 0.29
ACTN1-217ENST00000556203 HYIQ5T013 277 aa16.85■□□□□ 0.29
ACTN1-217ENST00000556203 FOXD4L5Q5VV16 416 aaPredicted RBP16.85■□□□□ 0.29
ACTN1-217ENST00000556203 TWF2Q6IBS0 349 aaKnown RBP16.85■□□□□ 0.29
ACTN1-217ENST00000556203 KCNK18Q7Z418 384 aa16.85■□□□□ 0.29
ACTN1-217ENST00000556203 CABP7Q86V35 215 aa16.85■□□□□ 0.29
ACTN1-217ENST00000556203 TMEM192Q8IY95 271 aa16.85■□□□□ 0.29
ACTN1-217ENST00000556203 RNF169Q8NCN4 708 aa16.85■□□□□ 0.29
ACTN1-217ENST00000556203 FBXO22Q8NEZ5 403 aa16.85■□□□□ 0.29
ACTN1-217ENST00000556203 GDPD5Q8WTR4 605 aa16.85■□□□□ 0.29
ACTN1-217ENST00000556203 FOXD4L4Q8WXT5 416 aaPredicted RBP16.85■□□□□ 0.29
ACTN1-217ENST00000556203 CDK5RAP3Q96JB5 506 aa16.85■□□□□ 0.29
ACTN1-217ENST00000556203 SAMD11Q96NU1 681 aa16.85■□□□□ 0.29
ACTN1-217ENST00000556203 AGPAT5Q9NUQ2 364 aa16.85■□□□□ 0.29
ACTN1-217ENST00000556203 TTC3P53804 2025 aa16.85■□□□□ 0.29
ACTN1-217ENST00000556203 COL4A6Q14031 1691 aa16.85■□□□□ 0.29
ACTN1-217ENST00000556203 ARID2Q68CP9 1835 aa16.84■□□□□ 0.29
ACTN1-217ENST00000556203 LOXHD1Q8IVV2 1947 aa16.84■□□□□ 0.29
ACTN1-217ENST00000556203 A0A0U1RQF3 1178 aa16.84■□□□□ 0.29
ACTN1-217ENST00000556203 LRRIQ4A6NIV6 560 aa16.84■□□□□ 0.29
ACTN1-217ENST00000556203 TBKBP1A7MCY6 615 aa16.84■□□□□ 0.29
ACTN1-217ENST00000556203 INO80B-WBP1J3KQ70 363 aa16.84■□□□□ 0.29
ACTN1-217ENST00000556203 LPXNO60711 386 aa16.84■□□□□ 0.29
ACTN1-217ENST00000556203 ERLIN2O94905 339 aa16.84■□□□□ 0.29
ACTN1-217ENST00000556203 LINC00271P0C7V0 271 aa16.84■□□□□ 0.29
ACTN1-217ENST00000556203 MARCKSP29966 332 aaPredicted RBP16.84■□□□□ 0.29
ACTN1-217ENST00000556203 LONP1P36776 959 aaKnown RBP16.84■□□□□ 0.29
ACTN1-217ENST00000556203 MBTD1Q05BQ5 628 aa16.84■□□□□ 0.29
ACTN1-217ENST00000556203 POU5F1BQ06416 359 aa16.84■□□□□ 0.29
ACTN1-217ENST00000556203 IFNLR1Q8IU57 520 aaPredicted RBP16.84■□□□□ 0.29
ACTN1-217ENST00000556203 BSNDQ8WZ55 320 aa16.84■□□□□ 0.29
ACTN1-217ENST00000556203 USP28Q96RU2 1077 aa16.84■□□□□ 0.29
ACTN1-217ENST00000556203 NT5C3AQ9H0P0 336 aa16.84■□□□□ 0.29
ACTN1-217ENST00000556203 MRPL42Q9Y6G3 142 aaKnown RBP16.84■□□□□ 0.29
ACTN1-217ENST00000556203 GTPBP6O43824 516 aaPredicted RBP16.83■□□□□ 0.28
ACTN1-217ENST00000556203 PDIA4P13667 645 aaKnown RBP16.83■□□□□ 0.28
ACTN1-217ENST00000556203 CTNNB1P35222 781 aa16.83■□□□□ 0.28
ACTN1-217ENST00000556203 UBA7P41226 1012 aa16.83■□□□□ 0.28
ACTN1-217ENST00000556203 TMEM119Q4V9L6 283 aa16.83■□□□□ 0.28
ACTN1-217ENST00000556203 CLP1Q92989 425 aaKnown RBP16.83■□□□□ 0.28
ACTN1-217ENST00000556203 RUSC1Q9BVN2 902 aa16.83■□□□□ 0.28
ACTN1-217ENST00000556203 TRAIPQ9BWF2 469 aa16.83■□□□□ 0.28
ACTN1-217ENST00000556203 NFKBIZQ9BYH8 718 aa16.83■□□□□ 0.28
ACTN1-217ENST00000556203 POLD4Q9HCU8 107 aa16.83■□□□□ 0.28
ACTN1-217ENST00000556203 FAM105AQ9NUU6 356 aa16.83■□□□□ 0.28
ACTN1-217ENST00000556203 FBXO2Q9UK22 296 aaPredicted RBP16.83■□□□□ 0.28
ACTN1-217ENST00000556203 RWDD3Q9Y3V2 267 aa16.83■□□□□ 0.28
ACTN1-217ENST00000556203 HOXA2O43364 376 aa16.82■□□□□ 0.28
ACTN1-217ENST00000556203 SLC26A4O43511 780 aa16.82■□□□□ 0.28
ACTN1-217ENST00000556203 TSPAN1O60635 241 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms