RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 PCDHA2Q9Y5H9 948 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 TAF6LQ9Y6J9 622 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 SQORQ9Y6N5 450 aa6.65□□□□□ -1.34
PRKCH-220ENST00000556164 USP34Q70CQ2 3546 aa6.65□□□□□ -1.35
PRKCH-220ENST00000556164 CACNA1HO95180 2353 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 H0Y858 1186 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 MGEA5O60502 916 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 RPS6KA5O75582 802 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 FGF18O76093 207 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 DDAH1O94760 285 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 FAM13AO94988 1023 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 PLEKHA8P1O95397 391 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 PDGFBP01127 241 aaPredicted RBP6.64□□□□□ -1.35
PRKCH-220ENST00000556164 AVPR2P30518 371 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 TECP42680 631 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 ANTXR2P58335 489 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 ERVFC1P60507 584 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 PTH1RQ03431 593 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 APOBRQ0VD83 1088 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 PLCB4Q15147 1175 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 FAM102BQ5T8I3 360 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 LLGL2Q6P1M3 1020 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 NFXL1Q6ZNB6 911 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 PACS2Q86VP3 889 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 CMTR1Q8N1G2 835 aaKnown RBP6.64□□□□□ -1.35
PRKCH-220ENST00000556164 COLGALT1Q8NBJ5 622 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 ATP8B4Q8TF62 1192 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 TNPO1Q92973 898 aaKnown RBP6.64□□□□□ -1.35
PRKCH-220ENST00000556164 PRIMPOLQ96LW4 560 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 PCYT2Q99447 389 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 MAP3K14Q99558 947 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 ADAM2Q99965 735 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 LZTS2Q9BRK4 669 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 SDF4Q9BRK5 362 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 PRKD2Q9BZL6 878 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 ACBD3Q9H3P7 528 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 ERVK-5Q9HDB9 667 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 JADE2Q9NQC1 790 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 ENTPD7Q9NQZ7 604 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 TMEM260Q9NX78 707 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 HCSTQ9UBK5 93 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 PCDHA6Q9UN73 950 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 RBM19Q9Y4C8 960 aaKnown RBP6.64□□□□□ -1.35
PRKCH-220ENST00000556164 PCDHA8Q9Y5H6 950 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 UBIAD1Q9Y5Z9 338 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 KDM3AQ9Y4C1 1321 aa6.64□□□□□ -1.35
PRKCH-220ENST00000556164 CFAP54Q96N23 3096 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 SMIM35A0A1B0GVV1 85 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 hCG_1642624A0A1W2PR95 340 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 FSCN2O14926 492 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 MAFGO15525 162 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 NDUFB5O43674 189 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 IGHDP01880 384 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 FGFR1P11362 822 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 LAG3P18627 525 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 RXRAP19793 462 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 PTPRZ1P23471 2315 aaPredicted RBP6.63□□□□□ -1.35
PRKCH-220ENST00000556164 KLRC1P26715 233 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 SMARCA1P28370 1054 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 DNAJA1P31689 397 aaKnown RBP6.63□□□□□ -1.35
PRKCH-220ENST00000556164 GNAQP50148 359 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 STAT5BP51692 787 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 ACTR2P61160 394 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 KCNH2Q12809 1159 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 DSC3Q14574 896 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 ODR4Q5SWX8 454 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 PDE12Q6L8Q7 609 aaKnown RBP6.63□□□□□ -1.35
PRKCH-220ENST00000556164 ANKRD54Q6NXT1 300 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 PPP1R18Q6NYC8 613 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 CASC1Q6TDU7 716 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 MTHFD1LQ6UB35 978 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 SLC24A5Q71RS6 500 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 PLPPR4Q7Z2D5 763 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 HEATR3Q7Z4Q2 680 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 RAB11FIP4Q86YS3 637 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 MB21D2Q8IYB1 491 aaPredicted RBP6.63□□□□□ -1.35
PRKCH-220ENST00000556164 NME8Q8N427 588 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 SRBD1Q8N5C6 995 aaKnown RBP6.63□□□□□ -1.35
PRKCH-220ENST00000556164 KREMEN2Q8NCW0 462 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 HELQQ8TDG4 1101 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 IGDCC4Q8TDY8 1250 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 RUFY2Q8WXA3 655 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 RIPOR3Q96MK2 946 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 PPP1R16BQ96T49 567 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 TCF25Q9BQ70 676 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 ATP6V0A4Q9HBG4 840 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 LY9Q9HBG7 655 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 RGS18Q9NS28 235 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 KCNH7Q9NS40 1196 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 C1orf112Q9NSG2 853 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 TYW1Q9NV66 732 aaKnown RBP6.63□□□□□ -1.35
PRKCH-220ENST00000556164 PUF60Q9UHX1 559 aaKnown RBP6.63□□□□□ -1.35
PRKCH-220ENST00000556164 NOC2LQ9Y3T9 749 aaKnown RBP6.63□□□□□ -1.35
PRKCH-220ENST00000556164 NR2E1Q9Y466 385 aa6.63□□□□□ -1.35
PRKCH-220ENST00000556164 C2orf16Q68DN1 1984 aa6.62□□□□□ -1.35
PRKCH-220ENST00000556164 DENND4AQ7Z401 1863 aa6.62□□□□□ -1.35
PRKCH-220ENST00000556164 NFASCO94856 1347 aa6.62□□□□□ -1.35
PRKCH-220ENST00000556164 CCDC69A6NI79 296 aa6.62□□□□□ -1.35
PRKCH-220ENST00000556164 HIDE1A8MVS5 230 aa6.62□□□□□ -1.35
PRKCH-220ENST00000556164 C9IYK1 514 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms