RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 PPP2R3AQ06190 1150 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 DGKZQ13574 1117 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 MTMR1Q13613 665 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 BAATQ14032 418 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-235ENST00000556082 VGLL4Q14135 290 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 CTTNQ14247 550 aaKnown RBP9.15□□□□□ -0.94
ATXN3-235ENST00000556082 TMEM132BQ14DG7 1078 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 LRRC41Q15345 812 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 NFIL3Q16649 462 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 KNOP1Q1ED39 458 aaKnown RBP9.15□□□□□ -0.94
ATXN3-235ENST00000556082 ARHGEF16Q5VV41 709 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 C9orf131Q5VYM1 1079 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 CYP26C1Q6V0L0 522 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 SLC30A10Q6XR72 485 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 NLRX1Q86UT6 975 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 REXO1L1PQ8IX06 675 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 IL31RAQ8NI17 732 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 KIF18AQ8NI77 898 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 NSUN6Q8TEA1 469 aaKnown RBP9.15□□□□□ -0.94
ATXN3-235ENST00000556082 TMEM174Q8WUU8 243 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 CDHR1Q96JP9 859 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 C16orf45Q96MC5 204 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-235ENST00000556082 UIMC1Q96RL1 719 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 IWS1Q96ST2 819 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 NOC4LQ9BVI4 516 aaKnown RBP9.15□□□□□ -0.94
ATXN3-235ENST00000556082 RUSC1Q9BVN2 902 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 TIPINQ9BVW5 301 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 TTYH3Q9C0H2 523 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 NDST4Q9H3R1 872 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 ACAD9Q9H845 621 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 ENAMQ9NRM1 1142 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 ABHD10Q9NUJ1 306 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 TRMT1Q9NXH9 659 aaKnown RBP9.15□□□□□ -0.94
ATXN3-235ENST00000556082 FAM184BQ9ULE4 1060 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 PPP2R2CQ9Y2T4 447 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 LUC7L2Q9Y383 392 aaKnown RBP9.15□□□□□ -0.94
ATXN3-235ENST00000556082 RIPK3Q9Y572 518 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 PCDHB11Q9Y5F2 797 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 CSADQ9Y600 493 aa9.15□□□□□ -0.94
ATXN3-235ENST00000556082 RASSF10A6NK89 507 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 B4DLN1 442 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 TRAF5O00463 557 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 DYNC1I1O14576 645 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 CETN3O15182 167 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 CCDC175P0C221 793 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 YBX3P16989 372 aaKnown RBP eCLIP9.14□□□□□ -0.95
ATXN3-235ENST00000556082 RPL13P26373 211 aaKnown RBP9.14□□□□□ -0.95
ATXN3-235ENST00000556082 CCND2P30279 289 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 HOXD13P35453 343 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 KRT9P35527 623 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 QARSP47897 775 aaKnown RBP9.14□□□□□ -0.95
ATXN3-235ENST00000556082 GSK3AP49840 483 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 ETF1P62495 437 aaKnown RBP9.14□□□□□ -0.95
ATXN3-235ENST00000556082 ZBED6P86452 979 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 GOLGA8FQ08AF8 430 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 GOLGA8DPQ0D2H9 430 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 ITGB3BPQ13352 177 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-235ENST00000556082 MEA1Q16626 185 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 PTPN21Q16825 1174 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 SNRNP48Q6IEG0 339 aaKnown RBP9.14□□□□□ -0.95
ATXN3-235ENST00000556082 ZNF746Q6NUN9 644 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-235ENST00000556082 TRIM65Q6PJ69 517 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 STXBP4Q6ZWJ1 553 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 MIER3Q7Z3K6 550 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 FRMD5Q7Z6J6 570 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 SFR1Q86XK3 245 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 ERO1BQ86YB8 467 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 C4orf19Q8IY42 314 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 GLIS3Q8NEA6 775 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 WNK4Q96J92 1243 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 INPP4AQ96PE3 977 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-235ENST00000556082 PARVGQ9HBI0 331 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 ANKEF1Q9NU02 776 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 CYP39A1Q9NYL5 469 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 FBXO40Q9UH90 709 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 SMCHD1A6NHR9 2005 aa9.14□□□□□ -0.95
ATXN3-235ENST00000556082 SBF1O95248 1867 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 NFASCO94856 1347 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 PHLPP2Q6ZVD8 1323 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 A0A0G2JLL6 359 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-235ENST00000556082 TTC26A0AVF1 554 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 CTIFO43310 598 aaKnown RBP9.13□□□□□ -0.95
ATXN3-235ENST00000556082 CALUO43852 315 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-235ENST00000556082 GPR37L1O60883 481 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 FAM13AO94988 1023 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 MYCP01106 439 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-235ENST00000556082 EIF2AK2P19525 551 aaKnown RBP9.13□□□□□ -0.95
ATXN3-235ENST00000556082 ICAM3P32942 547 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 NF2P35240 595 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 PSMC5P62195 406 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 ALCAMQ13740 583 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 MYBPC2Q14324 1141 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 SYCP1Q15431 976 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 RAD9BQ6WBX8 426 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 NSMFQ6X4W1 530 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 ZNF662Q6ZS27 426 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 ZNF720Q7Z2F6 126 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 PRRT2Q7Z6L0 340 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-235ENST00000556082 RIOX2Q8IUF8 465 aa9.13□□□□□ -0.95
ATXN3-235ENST00000556082 CREBRFQ8IUR6 639 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms