RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 GATMP50440 423 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 PRR20EP86478 221 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 PRR20CP86479 221 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 PRR20DP86480 221 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 PRR20BP86481 221 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 PRR20AP86496 221 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 TOB2Q14106 344 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-216ENST00000556066 SPOUT1Q5T280 376 aaKnown RBP7.56□□□□□ -1.2
PSEN1-216ENST00000556066 PTCRAQ6ISU1 281 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-216ENST00000556066 CPLX2Q6PUV4 134 aaKnown RBP7.56□□□□□ -1.2
PSEN1-216ENST00000556066 ALYREFQ86V81 257 aaKnown RBP7.56□□□□□ -1.2
PSEN1-216ENST00000556066 SMAP1Q8IYB5 467 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-216ENST00000556066 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-216ENST00000556066 TMEM40Q8WWA1 233 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 GJA10Q969M2 543 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 ZNF689Q96CS4 500 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-216ENST00000556066 ADAM2Q99965 735 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 TMX1Q9H3N1 280 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 IGFLR1Q9H665 355 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 SH3GLB2Q9NR46 395 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 CLDND1Q9NY35 253 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 AKT3Q9Y243 479 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 NOC2LQ9Y3T9 749 aaKnown RBP7.56□□□□□ -1.2
PSEN1-216ENST00000556066 PCDHB7Q9Y5E2 793 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 PCDHB3Q9Y5E6 796 aa7.56□□□□□ -1.2
PSEN1-216ENST00000556066 MAFBQ9Y5Q3 323 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-216ENST00000556066 MRPL42Q9Y6G3 142 aaKnown RBP7.56□□□□□ -1.2
PSEN1-216ENST00000556066 KDM3AQ9Y4C1 1321 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 WDR64B1ANS9 1081 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 C5orf67F2Z3F1 127 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 PI4K2BG5E9Z4 385 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 GPR182O15218 404 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 MSH4O15457 936 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 LILRB3O75022 631 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 DEXIO95424 95 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 C22orf31O95567 290 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 LINC00271P0C7V0 271 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 IL9P15248 144 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 CIITAP33076 1130 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 SARSP49591 514 aaKnown RBP7.55□□□□□ -1.2
PSEN1-216ENST00000556066 USP11P51784 963 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 CLCN3P51790 818 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 CRYBB1P53674 252 aaPredicted RBP7.55□□□□□ -1.2
PSEN1-216ENST00000556066 EVCP57679 992 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 CLUL1Q15846 466 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 LEXMQ3ZCV2 418 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 ODR4Q5SWX8 454 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 LRCH2Q5VUJ6 765 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 EFCAB12Q6NXP0 572 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 TREML4Q6UXN2 200 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 CMTR2Q8IYT2 770 aaKnown RBP7.55□□□□□ -1.2
PSEN1-216ENST00000556066 LRRC71Q8N4P6 559 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 TBCKQ8TEA7 893 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 CLP1Q92989 425 aaKnown RBP7.55□□□□□ -1.2
PSEN1-216ENST00000556066 LENG9Q96B70 501 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 PABPC5Q96DU9 382 aaKnown RBP7.55□□□□□ -1.2
PSEN1-216ENST00000556066 ZNF668Q96K58 619 aaPredicted RBP7.55□□□□□ -1.2
PSEN1-216ENST00000556066 FAM167AQ96KS9 214 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 SCLT1Q96NL6 688 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 MAP7D2Q96T17 732 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 OSMRQ99650 979 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 PLVAPQ9BX97 442 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 TEKT3Q9BXF9 490 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 LMAN2LQ9H0V9 348 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 UNC45AQ9H3U1 944 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 RC3H2Q9HBD1 1191 aaKnown RBP7.55□□□□□ -1.2
PSEN1-216ENST00000556066 ERVK-5Q9HDB9 667 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 DISC1Q9NRI5 854 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 NRBP2Q9NSY0 501 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 PDRG1Q9NUG6 133 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 PCDHGC3Q9UN70 934 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 PCDHA4Q9UN74 947 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 ST3GAL5Q9UNP4 418 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 CEP131Q9UPN4 1083 aa7.55□□□□□ -1.2
PSEN1-216ENST00000556066 RIF1Q5UIP0 2472 aaKnown RBP7.55□□□□□ -1.2
PSEN1-216ENST00000556066 WDFY4Q6ZS81 3184 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 PTPRZ1P23471 2315 aaPredicted RBP7.54□□□□□ -1.2
PSEN1-216ENST00000556066 TBKBP1A7MCY6 615 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 MAGEB2O15479 319 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 EDIL3O43854 480 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 ZNF862O60290 1169 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 MGEA5O60502 916 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 DTNBO60941 627 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 TDP2O95551 362 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 MMP1P03956 469 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 ITGB1P05556 798 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 TMOD1P28289 359 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 SFNP31947 248 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 GTF2F1P35269 517 aaKnown RBP eCLIP7.54□□□□□ -1.2
PSEN1-216ENST00000556066 RBM25P49756 843 aaKnown RBP7.54□□□□□ -1.2
PSEN1-216ENST00000556066 JAK3P52333 1124 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 NLRP11P59045 1033 aaKnown RBP7.54□□□□□ -1.2
PSEN1-216ENST00000556066 PRKCEQ02156 737 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 GUCA2AQ02747 115 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 TBC1D8BQ0IIM8 1120 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 HYAL1Q12794 435 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 UGCGQ16739 394 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 QPCTQ16769 361 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 CSPP1Q1MSJ5 1256 aa7.54□□□□□ -1.2
PSEN1-216ENST00000556066 FAM102BQ5T8I3 360 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms