RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 PPM1EQ8WY54 764 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 CLP1Q92989 425 aaKnown RBP10.73□□□□□ -0.69
ACTN1-215ENST00000555616 DYDC2Q96IM9 177 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 ADAM2Q99965 735 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 HSD17B14Q9BPX1 270 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 SH2D3AQ9BRG2 576 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 RAB34Q9BZG1 259 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 TMEM60Q9H2L4 133 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 DHX33Q9H6R0 707 aaKnown RBP10.73□□□□□ -0.69
ACTN1-215ENST00000555616 TTC12Q9H892 705 aaPredicted RBP10.73□□□□□ -0.69
ACTN1-215ENST00000555616 PRDM6Q9NQX0 595 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 RGL1Q9NZL6 768 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 THEGQ9P2T0 379 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 PCDHA12Q9UN75 941 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 RWDD3Q9Y3V2 267 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 TTC3P53804 2025 aa10.73□□□□□ -0.69
ACTN1-215ENST00000555616 RALGAPA2Q2PPJ7 1873 aa10.72□□□□□ -0.69
ACTN1-215ENST00000555616 DENND3A2RUS2 1198 aa10.72□□□□□ -0.69
ACTN1-215ENST00000555616 H3BNC9 293 aa10.72□□□□□ -0.69
ACTN1-215ENST00000555616 GAS2O43903 313 aaKnown RBP10.72□□□□□ -0.69
ACTN1-215ENST00000555616 CUTAO60888 179 aa10.72□□□□□ -0.69
ACTN1-215ENST00000555616 CTNNB1P35222 781 aa10.72□□□□□ -0.69
ACTN1-215ENST00000555616 TXKP42681 527 aa10.72□□□□□ -0.69
ACTN1-215ENST00000555616 DNM2P50570 870 aa10.72□□□□□ -0.69
ACTN1-215ENST00000555616 NPEPPSP55786 919 aa10.72□□□□□ -0.69
ACTN1-215ENST00000555616 CYP4A11Q02928 519 aa10.72□□□□□ -0.69
ACTN1-215ENST00000555616 BTG3Q14201 252 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-215ENST00000555616 ADALQ6DHV7 355 aa10.72□□□□□ -0.69
ACTN1-215ENST00000555616 DTHD1Q6ZMT9 781 aa10.72□□□□□ -0.69
ACTN1-215ENST00000555616 EXOC8Q8IYI6 725 aa10.72□□□□□ -0.69
ACTN1-215ENST00000555616 MICALL1Q8N3F8 863 aa10.72□□□□□ -0.69
ACTN1-215ENST00000555616 ZNF579Q8NAF0 562 aaKnown RBP10.72□□□□□ -0.69
ACTN1-215ENST00000555616 ATXN2LQ8WWM7 1075 aaKnown RBP10.72□□□□□ -0.69
ACTN1-215ENST00000555616 NLRP7Q8WX94 980 aa10.72□□□□□ -0.69
ACTN1-215ENST00000555616 CEP170P1Q96L14 293 aa10.72□□□□□ -0.69
ACTN1-215ENST00000555616 SCLT1Q96NL6 688 aa10.72□□□□□ -0.69
ACTN1-215ENST00000555616 EIF2AK1Q9BQI3 630 aaKnown RBP10.72□□□□□ -0.69
ACTN1-215ENST00000555616 RNF216Q9NWF9 866 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-215ENST00000555616 SUCLA2Q9P2R7 463 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-215ENST00000555616 FBXO2Q9UK22 296 aaPredicted RBP10.72□□□□□ -0.69
ACTN1-215ENST00000555616 SRPRBQ9Y5M8 271 aaKnown RBP10.72□□□□□ -0.69
ACTN1-215ENST00000555616 VCANP13611 3396 aa10.72□□□□□ -0.69
ACTN1-215ENST00000555616 A0A1W2PQ27 194 aa10.71□□□□□ -0.69
ACTN1-215ENST00000555616 A0A1W2PQ64 194 aa10.71□□□□□ -0.69
ACTN1-215ENST00000555616 A0A1W2PQD8 194 aa10.71□□□□□ -0.69
ACTN1-215ENST00000555616 VWA3AA6NCI4 1184 aa10.71□□□□□ -0.69
ACTN1-215ENST00000555616 POTEMA6NI47 508 aa10.71□□□□□ -0.69
ACTN1-215ENST00000555616 SLITRK3O94933 977 aa10.71□□□□□ -0.69
ACTN1-215ENST00000555616 MBD3O95983 291 aa10.71□□□□□ -0.69
ACTN1-215ENST00000555616 RB1P06400 928 aa10.71□□□□□ -0.69
ACTN1-215ENST00000555616 BMPR1AP36894 532 aa10.71□□□□□ -0.69
ACTN1-215ENST00000555616 POLGP54098 1239 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-215ENST00000555616 FAM189BP81408 668 aa10.71□□□□□ -0.69
ACTN1-215ENST00000555616 CTTNQ14247 550 aaKnown RBP10.71□□□□□ -0.69
ACTN1-215ENST00000555616 EMC2Q15006 297 aa10.71□□□□□ -0.69
ACTN1-215ENST00000555616 PRRC2BQ5JSZ5 2229 aaKnown RBP10.71□□□□□ -0.69
ACTN1-215ENST00000555616 ARID2Q68CP9 1835 aa10.71□□□□□ -0.69
ACTN1-215ENST00000555616 OTUD6AQ7L8S5 288 aa10.71□□□□□ -0.69
ACTN1-215ENST00000555616 C4orf32Q8N8J7 132 aa10.71□□□□□ -0.69
ACTN1-215ENST00000555616 SYMPKQ92797 1274 aaKnown RBP10.71□□□□□ -0.69
ACTN1-215ENST00000555616 MRPL38Q96DV4 380 aaKnown RBP10.71□□□□□ -0.69
ACTN1-215ENST00000555616 ZNF668Q96K58 619 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-215ENST00000555616 C11orf84Q9BUA3 381 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-215ENST00000555616 GCOM2Q9BZD3 368 aaPredicted RBP10.71□□□□□ -0.69
ACTN1-215ENST00000555616 ELAC1Q9H777 363 aaKnown RBP10.71□□□□□ -0.69
ACTN1-215ENST00000555616 ANKEF1Q9NU02 776 aa10.71□□□□□ -0.69
ACTN1-215ENST00000555616 LMBRD1Q9NUN5 540 aa10.71□□□□□ -0.69
ACTN1-215ENST00000555616 TMEM161AQ9NX61 479 aa10.71□□□□□ -0.69
ACTN1-215ENST00000555616 LRFN2Q9ULH4 789 aa10.71□□□□□ -0.69
ACTN1-215ENST00000555616 PCDHA7Q9UN72 937 aa10.71□□□□□ -0.69
ACTN1-215ENST00000555616 MRPL42Q9Y6G3 142 aaKnown RBP10.71□□□□□ -0.69
ACTN1-215ENST00000555616 A0A087WZ62 844 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 ZBTB39O15060 712 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 SFPQP23246 707 aaKnown RBP eCLIP10.7□□□□□ -0.77e-7■■■■□ 21
ACTN1-215ENST00000555616 LONP1P36776 959 aaKnown RBP10.7□□□□□ -0.7
ACTN1-215ENST00000555616 TXLNAP40222 546 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 GATMP50440 423 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 GPM6BQ13491 265 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 PTPROQ16827 1216 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 SKOR2Q2VWA4 1001 aaPredicted RBP10.7□□□□□ -0.7
ACTN1-215ENST00000555616 TIGD5Q53EQ6 642 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 XKR9Q5GH70 373 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 TJAP1Q5JTD0 557 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 CCDC73Q6ZRK6 1079 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 RHPN2Q8IUC4 686 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 TPH2Q8IWU9 490 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 PSPC1Q8WXF1 523 aaKnown RBP10.7□□□□□ -0.7
ACTN1-215ENST00000555616 AK8Q96MA6 479 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 NLRP4Q96MN2 994 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 FDXACB1Q9BRP7 624 aaPredicted RBP10.7□□□□□ -0.7
ACTN1-215ENST00000555616 TRAIPQ9BWF2 469 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 PLVAPQ9BX97 442 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 LMAN2LQ9H0V9 348 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 TUFT1Q9NNX1 390 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 XPNPEP1Q9NQW7 623 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 CHST12Q9NRB3 414 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 PCDHB7Q9Y5E2 793 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 COL4A3BPQ9Y5P4 624 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 XIRP2A4UGR9 3374 aa10.7□□□□□ -0.7
ACTN1-215ENST00000555616 TCHHQ07283 1943 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms