RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 LINC01553A4QN01 128 aa13.44□□□□□ -0.26
SRP54-206ENST00000555317 PP2D1A8MPX8 630 aa13.44□□□□□ -0.26
SRP54-206ENST00000555317 CSDE1O75534 798 aaKnown RBP13.44□□□□□ -0.26
SRP54-206ENST00000555317 ERLIN2O94905 339 aa13.44□□□□□ -0.26
SRP54-206ENST00000555317 FGFR4P22455 802 aa13.44□□□□□ -0.26
SRP54-206ENST00000555317 IGFBP4P22692 258 aa13.44□□□□□ -0.26
SRP54-206ENST00000555317 HTRA4P83105 476 aaPredicted RBP13.44□□□□□ -0.26
SRP54-206ENST00000555317 NCBP1Q09161 790 aaKnown RBP13.44□□□□□ -0.26
SRP54-206ENST00000555317 RESTQ13127 1097 aa13.44□□□□□ -0.26
SRP54-206ENST00000555317 BTG3Q14201 252 aaPredicted RBP13.44□□□□□ -0.26
SRP54-206ENST00000555317 FAM102BQ5T8I3 360 aa13.44□□□□□ -0.26
SRP54-206ENST00000555317 PADI6Q6TGC4 694 aa13.44□□□□□ -0.26
SRP54-206ENST00000555317 MAEAQ7L5Y9 396 aa13.44□□□□□ -0.26
SRP54-206ENST00000555317 SRGAP1Q7Z6B7 1085 aa13.44□□□□□ -0.26
SRP54-206ENST00000555317 FIBCD1Q8N539 461 aa13.44□□□□□ -0.26
SRP54-206ENST00000555317 AK8Q96MA6 479 aa13.44□□□□□ -0.26
SRP54-206ENST00000555317 NT5C3AQ9H0P0 336 aa13.44□□□□□ -0.26
SRP54-206ENST00000555317 BHMT2Q9H2M3 363 aa13.44□□□□□ -0.26
SRP54-206ENST00000555317 PIN4Q9Y237 131 aaKnown RBP13.44□□□□□ -0.26
SRP54-206ENST00000555317 GTPBP6O43824 516 aaPredicted RBP13.43□□□□□ -0.26
SRP54-206ENST00000555317 MGEA5O60502 916 aa13.43□□□□□ -0.26
SRP54-206ENST00000555317 CDC25AP30304 524 aa13.43□□□□□ -0.26
SRP54-206ENST00000555317 UBA7P41226 1012 aa13.43□□□□□ -0.26
SRP54-206ENST00000555317 CEBPZQ03701 1054 aaKnown RBP13.43□□□□□ -0.26
SRP54-206ENST00000555317 BECN1Q14457 450 aa13.43□□□□□ -0.26
SRP54-206ENST00000555317 IL17AQ16552 155 aa13.43□□□□□ -0.26
SRP54-206ENST00000555317 TWF2Q6IBS0 349 aaKnown RBP13.43□□□□□ -0.26
SRP54-206ENST00000555317 RTN4RL1Q86UN2 441 aaPredicted RBP13.43□□□□□ -0.26
SRP54-206ENST00000555317 NLRC5Q86WI3 1866 aa13.43□□□□□ -0.26
SRP54-206ENST00000555317 RNF169Q8NCN4 708 aa13.43□□□□□ -0.26
SRP54-206ENST00000555317 SP7Q8TDD2 431 aaPredicted RBP13.43□□□□□ -0.26
SRP54-206ENST00000555317 CALML4Q96GE6 196 aa13.43□□□□□ -0.26
SRP54-206ENST00000555317 SAMD11Q96NU1 681 aa13.43□□□□□ -0.26
SRP54-206ENST00000555317 XPNPEP1Q9NQW7 623 aa13.43□□□□□ -0.26
SRP54-206ENST00000555317 CHST12Q9NRB3 414 aa13.43□□□□□ -0.26
SRP54-206ENST00000555317 RWDD3Q9Y3V2 267 aa13.43□□□□□ -0.26
SRP54-206ENST00000555317 MYH15Q9Y2K3 1946 aa13.43□□□□□ -0.26
SRP54-206ENST00000555317 LRRIQ4A6NIV6 560 aa13.42□□□□□ -0.26
SRP54-206ENST00000555317 INO80B-WBP1J3KQ70 363 aa13.42□□□□□ -0.26
SRP54-206ENST00000555317 HOXA2O43364 376 aa13.42□□□□□ -0.26
SRP54-206ENST00000555317 SLC26A4O43511 780 aa13.42□□□□□ -0.26
SRP54-206ENST00000555317 EYA4O95677 639 aa13.42□□□□□ -0.26
SRP54-206ENST00000555317 SSBP05455 408 aaKnown RBP eCLIP13.42□□□□□ -0.26
SRP54-206ENST00000555317 SKIP12755 728 aa13.42□□□□□ -0.26
SRP54-206ENST00000555317 LONP1P36776 959 aaKnown RBP13.42□□□□□ -0.26
SRP54-206ENST00000555317 ERVK-21P61565 698 aa13.42□□□□□ -0.26
SRP54-206ENST00000555317 PPP2R5AQ15172 486 aa13.42□□□□□ -0.26
SRP54-206ENST00000555317 PCBP1Q15365 356 aaKnown RBP eCLIP13.42□□□□□ -0.26
SRP54-206ENST00000555317 PAN2Q504Q3 1202 aaKnown RBP13.42□□□□□ -0.26
SRP54-206ENST00000555317 FOXD4L5Q5VV16 416 aaPredicted RBP13.42□□□□□ -0.26
SRP54-206ENST00000555317 CABP7Q86V35 215 aa13.42□□□□□ -0.26
SRP54-206ENST00000555317 ZBTB8OSQ8IWT0 167 aa13.42□□□□□ -0.26
SRP54-206ENST00000555317 CMTR2Q8IYT2 770 aaKnown RBP13.42□□□□□ -0.26
SRP54-206ENST00000555317 ABI1Q8IZP0 508 aa13.42□□□□□ -0.26
SRP54-206ENST00000555317 FBXO22Q8NEZ5 403 aa13.42□□□□□ -0.26
SRP54-206ENST00000555317 MAFAQ8NHW3 353 aaPredicted RBP13.42□□□□□ -0.26
SRP54-206ENST00000555317 ASAP3Q8TDY4 903 aa13.42□□□□□ -0.26
SRP54-206ENST00000555317 FOXD4L4Q8WXT5 416 aaPredicted RBP13.42□□□□□ -0.26
SRP54-206ENST00000555317 IFT74Q96LB3 600 aa13.42□□□□□ -0.26
SRP54-206ENST00000555317 ZNF396Q96N95 335 aaPredicted RBP13.42□□□□□ -0.26
SRP54-206ENST00000555317 RNF39Q9H2S5 420 aa13.42□□□□□ -0.26
SRP54-206ENST00000555317 IFT122Q9HBG6 1241 aa13.42□□□□□ -0.26
SRP54-206ENST00000555317 TMEM161AQ9NX61 479 aa13.42□□□□□ -0.26
SRP54-206ENST00000555317 COL4A6Q14031 1691 aa13.42□□□□□ -0.26
SRP54-206ENST00000555317 RALGAPA2Q2PPJ7 1873 aa13.42□□□□□ -0.26
SRP54-206ENST00000555317 C9IYK1 514 aa13.41□□□□□ -0.26
SRP54-206ENST00000555317 DGKIO75912 1065 aa13.41□□□□□ -0.26
SRP54-206ENST00000555317 ARHGEF15O94989 841 aa13.41□□□□□ -0.26
SRP54-206ENST00000555317 CYP11B2P19099 503 aa13.41□□□□□ -0.26
SRP54-206ENST00000555317 CTNNB1P35222 781 aa13.41□□□□□ -0.26
SRP54-206ENST00000555317 ARL2P36404 184 aa13.41□□□□□ -0.26
SRP54-206ENST00000555317 TXLNAP40222 546 aa13.41□□□□□ -0.26
SRP54-206ENST00000555317 RAB27AP51159 221 aa13.41□□□□□ -0.26
SRP54-206ENST00000555317 CAPSQ13938 189 aa13.41□□□□□ -0.26
SRP54-206ENST00000555317 DSC3Q14574 896 aa13.41□□□□□ -0.26
SRP54-206ENST00000555317 STK38Q15208 465 aa13.41□□□□□ -0.26
SRP54-206ENST00000555317 ECM1Q16610 540 aa13.41□□□□□ -0.26
SRP54-206ENST00000555317 TMEM132AQ24JP5 1023 aa13.41□□□□□ -0.26
SRP54-206ENST00000555317 SPOUT1Q5T280 376 aaKnown RBP13.41□□□□□ -0.26
SRP54-206ENST00000555317 MICALL1Q8N3F8 863 aa13.41□□□□□ -0.26
SRP54-206ENST00000555317 KCTD17Q8N5Z5 321 aa13.41□□□□□ -0.26
SRP54-206ENST00000555317 KIFAP3Q92845 792 aa13.41□□□□□ -0.26
SRP54-206ENST00000555317 ELAC1Q9H777 363 aaKnown RBP13.41□□□□□ -0.26
SRP54-206ENST00000555317 GPRC5CQ9NQ84 441 aa13.41□□□□□ -0.26
SRP54-206ENST00000555317 CLIC4Q9Y696 253 aa13.41□□□□□ -0.26
SRP54-206ENST00000555317 PRRC2BQ5JSZ5 2229 aaKnown RBP13.41□□□□□ -0.26
SRP54-206ENST00000555317 TBKBP1A7MCY6 615 aa13.4□□□□□ -0.26
SRP54-206ENST00000555317 E9PMD0 336 aa13.4□□□□□ -0.26
SRP54-206ENST00000555317 ZSCAN22P10073 491 aaPredicted RBP13.4□□□□□ -0.26
SRP54-206ENST00000555317 GLRA2P23416 452 aa13.4□□□□□ -0.26
SRP54-206ENST00000555317 MARCKSP29966 332 aaPredicted RBP13.4□□□□□ -0.26
SRP54-206ENST00000555317 PTENP60484 403 aa13.4□□□□□ -0.26
SRP54-206ENST00000555317 POU5F1BQ06416 359 aa13.4□□□□□ -0.26
SRP54-206ENST00000555317 FAM173BQ6P4H8 233 aa13.4□□□□□ -0.26
SRP54-206ENST00000555317 ECHDC2Q86YB7 292 aa13.4□□□□□ -0.26
SRP54-206ENST00000555317 TMEM192Q8IY95 271 aa13.4□□□□□ -0.26
SRP54-206ENST00000555317 DEPTORQ8TB45 409 aa13.4□□□□□ -0.26
SRP54-206ENST00000555317 GDPD5Q8WTR4 605 aa13.4□□□□□ -0.26
SRP54-206ENST00000555317 DRC1Q96MC2 740 aa13.4□□□□□ -0.26
SRP54-206ENST00000555317 PLIN2Q99541 437 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms